BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18k19f
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004411-1|AAH04411.1| 224|Homo sapiens KIAA1166 protein. 35 0.25
AL355606-1|CAI41368.1| 224|Homo sapiens KIAA1166 protein. 35 0.25
AK222708-1|BAD96428.1| 224|Homo sapiens KIAA1166 variant protein. 35 0.25
AF270491-1|AAF75787.1| 224|Homo sapiens hepatocellular carcinom... 35 0.25
AB032992-1|BAA86480.1| 165|Homo sapiens KIAA1166 protein protein. 35 0.25
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 33 1.0
U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein. 33 1.0
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 33 1.0
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 33 1.0
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 33 1.0
BC038402-1|AAH38402.1| 607|Homo sapiens ARP5 actin-related prot... 32 1.8
BC006162-1|AAH06162.1| 342|Homo sapiens ACTR5 protein protein. 32 1.8
BC001324-1|AAH01324.1| 415|Homo sapiens ACTR5 protein protein. 32 1.8
AL133519-2|CAD37358.1| 607|Homo sapiens ARP5 actin-related prot... 32 1.8
AK022847-1|BAB14270.1| 607|Homo sapiens protein ( Homo sapiens ... 32 1.8
AK022918-1|BAB14308.1| 224|Homo sapiens protein ( Homo sapiens ... 32 2.4
BC051787-1|AAH51787.1| 1375|Homo sapiens NLRP1 protein protein. 30 9.5
AF310105-1|AAG30288.1| 1429|Homo sapiens NALP1 protein. 30 9.5
AF298548-1|AAG15254.1| 1429|Homo sapiens caspase recruitment dom... 30 9.5
AF229062-1|AAK00751.1| 1443|Homo sapiens NAC-delta splice varian... 30 9.5
AF229061-1|AAK00750.1| 1399|Homo sapiens NAC-gamma splice varian... 30 9.5
AF229060-1|AAK00749.1| 1473|Homo sapiens NAC-beta splice variant... 30 9.5
AF229059-1|AAK00748.1| 1429|Homo sapiens NAC-alpha splice varian... 30 9.5
AB023143-1|BAA76770.2| 1447|Homo sapiens KIAA0926 protein protein. 30 9.5
>BC004411-1|AAH04411.1| 224|Homo sapiens KIAA1166 protein.
Length = 224
Score = 35.1 bits (77), Expect = 0.25
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 110 IKEIRERSLQSLKSKFKLGWEFDDEISGTRFLLE--SLMEWFNDEKPLLQREALDLLHSV 283
IKEIR ++LQ K K +L EF+ S R L E M+ EK + E L L+H+
Sbjct: 14 IKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEK-MAHVEELRLIHAD 72
Query: 284 IKTKSGTYIVQETGLNNLV 340
I T E LN L+
Sbjct: 73 INVMENTIKQSENDLNKLL 91
>AL355606-1|CAI41368.1| 224|Homo sapiens KIAA1166 protein.
Length = 224
Score = 35.1 bits (77), Expect = 0.25
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 110 IKEIRERSLQSLKSKFKLGWEFDDEISGTRFLLE--SLMEWFNDEKPLLQREALDLLHSV 283
IKEIR ++LQ K K +L EF+ S R L E M+ EK + E L L+H+
Sbjct: 14 IKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEK-MAHVEELRLIHAD 72
Query: 284 IKTKSGTYIVQETGLNNLV 340
I T E LN L+
Sbjct: 73 INVMENTIKQSENDLNKLL 91
>AK222708-1|BAD96428.1| 224|Homo sapiens KIAA1166 variant protein.
Length = 224
Score = 35.1 bits (77), Expect = 0.25
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 110 IKEIRERSLQSLKSKFKLGWEFDDEISGTRFLLE--SLMEWFNDEKPLLQREALDLLHSV 283
IKEIR ++LQ K K +L EF+ S R L E M+ EK + E L L+H+
Sbjct: 14 IKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEK-MAHVEELRLIHAD 72
Query: 284 IKTKSGTYIVQETGLNNLV 340
I T E LN L+
Sbjct: 73 INVMENTIKQSENDLNKLL 91
>AF270491-1|AAF75787.1| 224|Homo sapiens hepatocellular
carcinoma-associated antigen 127 protein.
Length = 224
Score = 35.1 bits (77), Expect = 0.25
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 110 IKEIRERSLQSLKSKFKLGWEFDDEISGTRFLLE--SLMEWFNDEKPLLQREALDLLHSV 283
IKEIR ++LQ K K +L EF+ S R L E M+ EK + E L L+H+
Sbjct: 14 IKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEK-MAHVEELRLIHAD 72
Query: 284 IKTKSGTYIVQETGLNNLV 340
I T E LN L+
Sbjct: 73 INVMENTIKQSENDLNKLL 91
>AB032992-1|BAA86480.1| 165|Homo sapiens KIAA1166 protein protein.
Length = 165
Score = 35.1 bits (77), Expect = 0.25
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 110 IKEIRERSLQSLKSKFKLGWEFDDEISGTRFLLE--SLMEWFNDEKPLLQREALDLLHSV 283
IKEIR ++LQ K K +L EF+ S R L E M+ EK + E L L+H+
Sbjct: 46 IKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEK-MAHVEELRLIHAD 104
Query: 284 IKTKSGTYIVQETGLNNLV 340
I T E LN L+
Sbjct: 105 INVMENTIKQSENDLNKLL 123
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 33.1 bits (72), Expect = 1.0
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 26 CLH-KKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
CL +K+ L S E + N ++ ++E+++ + +LK +L E ++ G
Sbjct: 2737 CLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKE-NERAQGKMK 2795
Query: 203 LLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQETGLNNLVT 343
LL + +EK +LQ+E L + K K+GT V +T ++ L T
Sbjct: 2796 LLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGT--VMDTKVDELTT 2840
>U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein.
Length = 1017
Score = 33.1 bits (72), Expect = 1.0
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 26 CLH-KKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
CL +K+ L S E + N ++ ++E+++ + +LK +L E ++ G
Sbjct: 641 CLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKE-NERAQGKMK 699
Query: 203 LLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQETGLNNLVT 343
LL + +EK +LQ+E L + K K+GT V +T ++ L T
Sbjct: 700 LLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGT--VMDTKVDELTT 744
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 33.1 bits (72), Expect = 1.0
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 26 CLH-KKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
CL +K+ L S E + N ++ ++E+++ + +LK +L E ++ G
Sbjct: 2834 CLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKE-NERAQGKMK 2892
Query: 203 LLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQETGLNNLVT 343
LL + +EK +LQ+E L + K K+GT V +T ++ L T
Sbjct: 2893 LLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGT--VMDTKVDELTT 2937
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 33.1 bits (72), Expect = 1.0
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 26 CLH-KKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
CL +K+ L S E + N ++ ++E+++ + +LK +L E ++ G
Sbjct: 2738 CLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKE-NERAQGKMK 2796
Query: 203 LLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQETGLNNLVT 343
LL + +EK +LQ+E L + K K+GT V +T ++ L T
Sbjct: 2797 LLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGT--VMDTKVDELTT 2841
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 33.1 bits (72), Expect = 1.0
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 26 CLH-KKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
CL +K+ L S E + N ++ ++E+++ + +LK +L E ++ G
Sbjct: 2738 CLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKE-NERAQGKMK 2796
Query: 203 LLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQETGLNNLVT 343
LL + +EK +LQ+E L + K K+GT V +T ++ L T
Sbjct: 2797 LLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGT--VMDTKVDELTT 2841
>BC038402-1|AAH38402.1| 607|Homo sapiens ARP5 actin-related protein
5 homolog (yeast) protein.
Length = 607
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 2 IFKKSALNCLHKKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQS 142
+ + ++ HK +I LNM PE + +YIQKL +++ +++ LQ+
Sbjct: 333 LLEDGQMDQFHKALIE-LNMDSPEELQSYIQKLSIAVEQAKQKILQA 378
>BC006162-1|AAH06162.1| 342|Homo sapiens ACTR5 protein protein.
Length = 342
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 2 IFKKSALNCLHKKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQS 142
+ + ++ HK +I LNM PE + +YIQKL +++ +++ LQ+
Sbjct: 68 LLEDGQMDQFHKALIE-LNMDSPEELQSYIQKLSIAVEQAKQKILQA 113
>BC001324-1|AAH01324.1| 415|Homo sapiens ACTR5 protein protein.
Length = 415
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 2 IFKKSALNCLHKKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQS 142
+ + ++ HK +I LNM PE + +YIQKL +++ +++ LQ+
Sbjct: 141 LLEDGQMDQFHKALIE-LNMDSPEELQSYIQKLSIAVEQAKQKILQA 186
>AL133519-2|CAD37358.1| 607|Homo sapiens ARP5 actin-related protein
5 homolog (yeast) protein.
Length = 607
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 2 IFKKSALNCLHKKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQS 142
+ + ++ HK +I LNM PE + +YIQKL +++ +++ LQ+
Sbjct: 333 LLEDGQMDQFHKALIE-LNMDSPEELQSYIQKLSIAVEQAKQKILQA 378
>AK022847-1|BAB14270.1| 607|Homo sapiens protein ( Homo sapiens
cDNA FLJ12785 fis, clone NT2RP2001900, weakly similar to
ACTIN-LIKE PROTEIN ARP5. ).
Length = 607
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 2 IFKKSALNCLHKKIIPPLNMSKPEIIINYIQKLRHPIKEIRERSLQS 142
+ + ++ HK +I LNM PE + +YIQKL +++ +++ LQ+
Sbjct: 333 LLEDGQMDQFHKALIE-LNMDSPEELQSYIQKLSIAVEQAKQKILQA 378
>AK022918-1|BAB14308.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ12856 fis, clone NT2RP2003511. ).
Length = 224
Score = 31.9 bits (69), Expect = 2.4
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 110 IKEIRERSLQSLKSKFKLGWEFDDEISGTRFLLE--SLMEWFNDEKPLLQREALDLLHSV 283
IKEIR ++LQ K K +L EF+ S R L E M+ EK + E L L+ +
Sbjct: 14 IKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEK-MAHVEELRLIRAD 72
Query: 284 IKTKSGTYIVQETGLNNLV 340
I T E LN L+
Sbjct: 73 INVMENTIKQSENDLNKLL 91
>BC051787-1|AAH51787.1| 1375|Homo sapiens NLRP1 protein protein.
Length = 1375
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AF310105-1|AAG30288.1| 1429|Homo sapiens NALP1 protein.
Length = 1429
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AF298548-1|AAG15254.1| 1429|Homo sapiens caspase recruitment domain
protein 7 protein.
Length = 1429
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AF229062-1|AAK00751.1| 1443|Homo sapiens NAC-delta splice variant
protein.
Length = 1443
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AF229061-1|AAK00750.1| 1399|Homo sapiens NAC-gamma splice variant
protein.
Length = 1399
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AF229060-1|AAK00749.1| 1473|Homo sapiens NAC-beta splice variant
protein.
Length = 1473
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AF229059-1|AAK00748.1| 1429|Homo sapiens NAC-alpha splice variant
protein.
Length = 1429
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 699 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 733
>AB023143-1|BAA76770.2| 1447|Homo sapiens KIAA0926 protein protein.
Length = 1447
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 212 SLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQ 316
+LM+W + LLQ +L+ LH + +T++ T++ Q
Sbjct: 717 NLMQWVPSLQLLLQPHSLESLHCLYETRNKTFLTQ 751
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,017,561
Number of Sequences: 237096
Number of extensions: 1580849
Number of successful extensions: 7001
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7001
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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