Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18k19f
(717 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-P... 31 1.2
AE013599-1136|AAO41429.1| 720|Drosophila melanogaster CG12052-P... 31 2.1
AY121683-1|AAM52010.1| 896|Drosophila melanogaster RE35807p pro... 30 3.6
AE013599-1464|AAF58526.3| 874|Drosophila melanogaster CG13160-P... 30 3.6
AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p pro... 29 6.3
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 6.3
X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein. 29 8.4
L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protei... 29 8.4
BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p pro... 29 8.4
BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p pro... 29 8.4
AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,... 29 8.4
AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,... 29 8.4
AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,... 29 8.4
AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,... 29 8.4
AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,... 29 8.4
>AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-PA
protein.
Length = 1977
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 89 IQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTR-FLLESLMEWFNDEKPLLQREAL 265
+ KL +EIR R+L ++++F + + I LL+ L+ WF PL+ L
Sbjct: 16 LTKLTSESEEIRMRALDQIETRFIRCLQLGEPIQFKPVLLLKQLIRWFGYTPPLVPDRVL 75
Query: 266 DLLHSVIKTKSGTYIVQE 319
++ +++++ ++++
Sbjct: 76 AMIMELLRSEYAEAVIRK 93
>AE013599-1136|AAO41429.1| 720|Drosophila melanogaster CG12052-PS,
isoform S protein.
Length = 720
Score = 30.7 bits (66), Expect = 2.1
Identities = 25/97 (25%), Positives = 39/97 (40%)
Frame = -1
Query: 444 SSEDTVFKKVRLSIMSS*IFNASLSILSLNFCIFVTKLFKPVSCTMYVPDFVFITECSKS 265
+S F + LS++S I S IL N +T L + + C + SK
Sbjct: 474 NSTTPYFDSLSLSVLSVRIVKQSQQILDKNPITILTDL-RTLYCNYATAVIAAASAASKK 532
Query: 264 KASRCRSGFSSLNHSIKDSNRNLVPEISSSNSHPNLN 154
A + S+ NH ++ N + + SNS N N
Sbjct: 533 PAEHQTAASSTANHQNQNLNHQNLLQQHHSNSSSNSN 569
>AY121683-1|AAM52010.1| 896|Drosophila melanogaster RE35807p
protein.
Length = 896
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -2
Query: 584 HLNICLKPMILLNSVCLKLNYSNCCLISHNFQLSFLQINLV--LEYSNFLLKTLCLRRSD 411
H N L ++ L + LK + LIS F ++ L INL+ L +L + +
Sbjct: 521 HANCVLLAILCLGATALKYRSAYLFLISLIFYVAALIINLLTRLHCRGYLWSLVLIVFQI 580
Query: 410 SP*CLHRYLMHPYLFYL 360
P H YL H ++ L
Sbjct: 581 IPFIYHAYLFHMFILIL 597
>AE013599-1464|AAF58526.3| 874|Drosophila melanogaster CG13160-PA
protein.
Length = 874
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -2
Query: 584 HLNICLKPMILLNSVCLKLNYSNCCLISHNFQLSFLQINLV--LEYSNFLLKTLCLRRSD 411
H N L ++ L + LK + LIS F ++ L INL+ L +L + +
Sbjct: 499 HANCVLLAILCLGATALKYRSAYLFLISLIFYVAALIINLLTRLHCRGYLWSLVLIVFQI 558
Query: 410 SP*CLHRYLMHPYLFYL 360
P H YL H ++ L
Sbjct: 559 IPFIYHAYLFHMFILIL 575
>AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p
protein.
Length = 1258
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 56 NMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
N PE+ +I+ LR K + E+S +S SKF G+ D RF
Sbjct: 76 NNDVPELRDLHIKLLRKTRKTVHEKSWESALSKFCFGYSVQDAWEIERF 124
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 56 NMSKPEIIINYIQKLRHPIKEIRERSLQSLKSKFKLGWEFDDEISGTRF 202
N PE+ +I+ LR K + E+S +S SKF G+ D RF
Sbjct: 76 NNDVPELRDLHIKLLRKTRKTVHEKSWESALSKFCFGYSVQDAWEIERF 124
>X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.
Length = 1533
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 1118 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 1167
>L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protein
protein.
Length = 1533
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 1118 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 1167
>BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p protein.
Length = 1533
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 1118 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 1167
>BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p
protein.
Length = 935
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 520 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 569
>AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,
isoform E protein.
Length = 935
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 520 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 569
>AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,
isoform B protein.
Length = 1185
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 770 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 819
>AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,
isoform D protein.
Length = 1533
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 1118 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 1167
>AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,
isoform C protein.
Length = 1533
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 1118 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 1167
>AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,
isoform A protein.
Length = 1533
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 170 EFDDEISGTRFLLESLMEWFNDEKPLLQREALDLLHSVIKTKSGTYIVQE 319
EF + G+RF+ + L EK ++ E L +S++ G Y++Q+
Sbjct: 1118 EFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQK 1167
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,431,377
Number of Sequences: 53049
Number of extensions: 520448
Number of successful extensions: 1370
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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