Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18k19f
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83129-2|CAB63327.1|  318|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81112-4|CAB03275.1|  317|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z83116-2|CAB05560.1|  320|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z83129-2|CAB63327.1|  318|Caenorhabditis elegans Hypothetical
           protein W06G6.3 protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 417 VRLSIMSS*IFNASLSILSLNFCIFVTKLFK 325
           +RL  +SS IF A+LSI  +++ +F+   FK
Sbjct: 256 IRLQAISSAIFAATLSIFPISYILFLPPFFK 286


>U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical
           protein B0252.1 protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 17/96 (17%)
 Frame = +2

Query: 29  LHKKIIPPLNMSKPEIIIN-YIQKLRHPIKEIRE--------------RSLQSLKSKFKL 163
           +H  + PP  +S P +  N YI     P  +IR+               S Q +K  F  
Sbjct: 22  IHPVLPPPTELSCPTVGTNAYILVTVTPETDIRQFEDLLNSYGRLMPFNSTQQIKYDFYF 81

Query: 164 GWEFDDEISGTRFLLESLMEWFNDEK--PLLQREAL 265
           G  +   ++ T  L++ + EWFND    PLL   AL
Sbjct: 82  GSNYSTIVT-TNDLIKEISEWFNDTNYYPLLYASAL 116


>U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical
           protein F46H5.7b protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 143 LKSKFKLGWEFDDEISGTRFLLESLMEWFNDEK 241
           LK   K  WE ++E S   + L  L +W+ND K
Sbjct: 366 LKDSEKRVWEINEEKSKLEWRLGELSQWWNDAK 398


>U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical
           protein F46H5.7a protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 143 LKSKFKLGWEFDDEISGTRFLLESLMEWFNDEK 241
           LK   K  WE ++E S   + L  L +W+ND K
Sbjct: 366 LKDSEKRVWEINEEKSKLEWRLGELSQWWNDAK 398


>Z81112-4|CAB03275.1|  317|Caenorhabditis elegans Hypothetical
           protein T02B5.4 protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -2

Query: 560 MILLNSVCLKLNYSNCCLISHNFQLSFLQINLVLEYSNFLLK 435
           +++    C +L     C + H F L FL+ NL+   S+++ +
Sbjct: 69  LVIPTGPCTRLG-PTACYVGHMFMLCFLECNLIWMISSYIFR 109


>Z83116-2|CAB05560.1|  320|Caenorhabditis elegans Hypothetical
           protein M01B2.2 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 560 MILLNSVCLKLNYSNCCLISHNFQLSFLQINLVLEYSNFLLK 435
           +++    C  L     C I H F L FL+ NL+   S+++ +
Sbjct: 69  LVIPTGPCTHLG-PTACYIGHMFMLCFLECNLIWMISSYIFR 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,506,460
Number of Sequences: 27780
Number of extensions: 280697
Number of successful extensions: 825
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)