Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18k16r
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537867-1|CAD97869.1| 972|Homo sapiens hypothetical protein pr... 74 8e-13
BC058845-1|AAH58845.1| 963|Homo sapiens esophageal cancer assoc... 74 8e-13
BC050464-1|AAH50464.1| 963|Homo sapiens esophageal cancer assoc... 74 8e-13
BC014900-1|AAH14900.2| 869|Homo sapiens MGC16824 protein protein. 74 8e-13
AL136744-1|CAB66678.1| 568|Homo sapiens hypothetical protein pr... 74 8e-13
AK024693-1|BAB14965.1| 824|Homo sapiens protein ( Homo sapiens ... 74 8e-13
AF461052-1|AAL67806.2| 813|Homo sapiens esophageal cancer assoc... 74 8e-13
AC002550-3|AAC05806.1| 206|Homo sapiens Unknown gene product pr... 74 8e-13
>BX537867-1|CAD97869.1| 972|Homo sapiens hypothetical protein
protein.
Length = 972
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 833 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 892
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 893 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 931
>BC058845-1|AAH58845.1| 963|Homo sapiens esophageal cancer associated
protein protein.
Length = 963
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 824 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 883
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 884 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 922
>BC050464-1|AAH50464.1| 963|Homo sapiens esophageal cancer associated
protein protein.
Length = 963
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 824 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 883
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 884 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 922
>BC014900-1|AAH14900.2| 869|Homo sapiens MGC16824 protein protein.
Length = 869
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 730 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 789
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 790 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 828
>AL136744-1|CAB66678.1| 568|Homo sapiens hypothetical protein
protein.
Length = 568
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 429 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 488
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 489 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 527
>AK024693-1|BAB14965.1| 824|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21040 fis, clone CAE10642. ).
Length = 824
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 685 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 744
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 745 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 783
>AF461052-1|AAL67806.2| 813|Homo sapiens esophageal cancer
associated protein protein.
Length = 813
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 674 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 733
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 734 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 772
>AC002550-3|AAC05806.1| 206|Homo sapiens Unknown gene product
protein.
Length = 206
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = -3
Query: 780 ILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKE 601
+L LLS M+QE Y +HID V SND LYG D +F++ + + ++L LK L ++
Sbjct: 67 VLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEA 126
Query: 600 TKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKK 484
K+Q +L L F ++ DL + + L+ NLW L+++
Sbjct: 127 LKRQSSLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQR 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,040,316
Number of Sequences: 237096
Number of extensions: 2236075
Number of successful extensions: 4562
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4562
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -