Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18j23f
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033510-10|CAA22063.2|  274|Caenorhabditis elegans Hypothetical...    29   2.4  
AL033510-2|CAA22065.1|  281|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z50863-5|CAA90738.2|  746|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z50863-4|CAL36493.1|  412|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z49153-2|CAA89023.2|  746|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z75714-11|CAB00063.2|  723|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z75714-10|CAN99711.1|  721|Caenorhabditis elegans Hypothetical p...    28   5.5  
AC006708-19|AAF60423.3|  588|Caenorhabditis elegans Mtm (myotubu...    28   7.3  

>AL033510-10|CAA22063.2|  274|Caenorhabditis elegans Hypothetical
           protein Y40H7A.3 protein.
          Length = 274

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 132 FTMYNFTKNPVYAIGCCRYFLI*KRRLSFFTVCP 31
           F M+NF +NP   I CC Y  I +  +S + V P
Sbjct: 236 FRMFNFERNPSCTI-CCEYSFINEMCMSRYQVIP 268


>AL033510-2|CAA22065.1|  281|Caenorhabditis elegans Hypothetical
           protein Y40H7A.2 protein.
          Length = 281

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 132 FTMYNFTKNPVYAIGCCRYFLI*KRRLSFFTVCP 31
           F M+NF +NP   I CC Y  I +  +S + V P
Sbjct: 243 FRMFNFERNPSCTI-CCEYSFINEMCMSRYQVIP 275


>Z50863-5|CAA90738.2|  746|Caenorhabditis elegans Hypothetical
           protein C14H10.2a protein.
          Length = 746

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/31 (32%), Positives = 23/31 (74%)
 Frame = +2

Query: 461 KVTEWQSFCNTSNKISQLDNVNY*QQKTILF 553
           K+ + +SFC+  NK+S+L++ +  Q++ ++F
Sbjct: 648 KLLQHRSFCDKINKLSELEDASRIQEELVMF 678


>Z50863-4|CAL36493.1|  412|Caenorhabditis elegans Hypothetical
           protein C14H10.2b protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/31 (32%), Positives = 23/31 (74%)
 Frame = +2

Query: 461 KVTEWQSFCNTSNKISQLDNVNY*QQKTILF 553
           K+ + +SFC+  NK+S+L++ +  Q++ ++F
Sbjct: 314 KLLQHRSFCDKINKLSELEDASRIQEELVMF 344


>Z49153-2|CAA89023.2|  746|Caenorhabditis elegans Hypothetical
           protein C14H10.2a protein.
          Length = 746

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/31 (32%), Positives = 23/31 (74%)
 Frame = +2

Query: 461 KVTEWQSFCNTSNKISQLDNVNY*QQKTILF 553
           K+ + +SFC+  NK+S+L++ +  Q++ ++F
Sbjct: 648 KLLQHRSFCDKINKLSELEDASRIQEELVMF 678


>Z75714-11|CAB00063.2|  723|Caenorhabditis elegans Hypothetical
           protein ZC434.6b protein.
          Length = 723

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +2

Query: 398 VSPAAVIVLDKLLSI---QRNIGLKVTEWQSFCNTSNK 502
           +S   V VL  ++S+    R++G ++ +WQ   NTSN+
Sbjct: 295 ISVGEVSVLTSIISVLAAARSMGTQIEKWQKASNTSNR 332


>Z75714-10|CAN99711.1|  721|Caenorhabditis elegans Hypothetical
           protein ZC434.6a protein.
          Length = 721

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +2

Query: 398 VSPAAVIVLDKLLSI---QRNIGLKVTEWQSFCNTSNK 502
           +S   V VL  ++S+    R++G ++ +WQ   NTSN+
Sbjct: 295 ISVGEVSVLTSIISVLAAARSMGTQIEKWQKASNTSNR 332


>AC006708-19|AAF60423.3|  588|Caenorhabditis elegans Mtm
           (myotubularin) family protein 1 protein.
          Length = 588

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 186 TISKQNDHKYNYYMYTELFTMYNFTKNP 103
           +++K+ D  Y + +Y + + +Y FT NP
Sbjct: 96  SVAKRGDDNYGFTIYCKDYRVYRFTCNP 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,189,787
Number of Sequences: 27780
Number of extensions: 299977
Number of successful extensions: 634
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)