Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18j04f
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74472-2|CAA98945.1|  188|Caenorhabditis elegans Hypothetical pr...   103   8e-23
Z81522-3|CAB04234.2|  167|Caenorhabditis elegans Hypothetical pr...    37   0.013
U39999-3|AAR85904.2|  114|Caenorhabditis elegans Insulin related...    33   0.17 
AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical ...    31   0.88 
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U28731-5|AAA68299.1|  125|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical...    29   2.7  

>Z74472-2|CAA98945.1|  188|Caenorhabditis elegans Hypothetical
           protein F23H12.2 protein.
          Length = 188

 Score =  103 bits (248), Expect = 8e-23
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
 Frame = +2

Query: 113 MMEITRTTLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERR---LNAQQNASRSRT 283
           ++   ++ + +A GIAG  FLGYC+YFD +R   P +K K+R++R     A   A R   
Sbjct: 5   ILGFNKSNVVLAAGIAGAAFLGYCIYFDHKRINAPDYKDKIRQKRRAQAGAGGMAPRRPA 64

Query: 284 LGG--PVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVL 457
             G    PD+ D   MQRFFLQ++Q                H+  AV +CG+++QLLS+ 
Sbjct: 65  AAGNDAAPDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGESQQLLSIF 124

Query: 458 QQTMPAPIFHLLLKKLPEVSERLRSSMKARSNVMQEE 568
           QQT+    F  ++++LP   ERL     A+++  + E
Sbjct: 125 QQTLSEDQFRAVVQQLPSTRERLAEMFGAKADEAENE 161


>Z81522-3|CAB04234.2|  167|Caenorhabditis elegans Hypothetical
           protein F32B4.2 protein.
          Length = 167

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 8/142 (5%)
 Frame = +2

Query: 140 GIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGP-------V 298
           G+ VG A  L +    Y+ Q+++          E       ++S  R  GG        +
Sbjct: 13  GVVVGGAALLAIAAYYYWSQKKKSSDTSSATSSESNDVVMMSSSEPRADGGADSKAKFNI 72

Query: 299 PDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXX-VEHLGQAVAVCGQTEQLLSVLQQTMPA 475
            D N     ++ F++Q+                  H+  A+ + G+T QLL VL+ ++  
Sbjct: 73  EDENVRRVCEKLFMEQMDLGEAYLEDEETEELGAIHMANAIVLTGETAQLLKVLRGSISP 132

Query: 476 PIFHLLLKKLPEVSERLRSSMK 541
             F  + K LP    R+   ++
Sbjct: 133 AHFANIQKYLPSADLRVHQLLQ 154


>U39999-3|AAR85904.2|  114|Caenorhabditis elegans Insulin related
           protein 15 protein.
          Length = 114

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 112 NDGNHKNNVRYSCRNCGNTVLGLLCIL*PAKAQGSAVQKEVERAKTECTTKCFEVSYPRW 291
           ND   ++N  +S R+CG ++   +  L      G A+Q E+ RA   C+T C +     W
Sbjct: 23  NDFQPRDNKHHSYRSCGESLSRRVAFL----CNGGAIQTEILRALDCCSTGCTDKQIFSW 78


>AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.3 protein.
          Length = 745

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 170 FLGYCVYFDQQRRKDPLFKKKLRERRLN--AQQNASRSRTLGGPVPDMNDHEA 322
           F  YC +  QQ R + + ++K  ERRL   ++ +AS++R  GG  P     E+
Sbjct: 205 FGAYCYWKVQQWRDEKMAREKAWERRLARVSEVSASKNRNAGGVDPAKRPRES 257


>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
           protein C14C10.4 protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 481 LPSAS*ETARSFRTPPILDEGEEQRNAGRR 570
           L SA+ +T ++  TPP L + +EQ N GR+
Sbjct: 18  LSSAAAQTTKNTATPPPLKQQQEQSNDGRK 47


>U28731-5|AAA68299.1|  125|Caenorhabditis elegans Hypothetical
           protein F12A10.6 protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = -2

Query: 279 RDLEAFCCAFSLRSLNFFLNSGSLRLCWS----KYTQ*PKNSVPAI 154
           RD E    A  +       NSG+L +CW     ++   P+NS+PAI
Sbjct: 51  RDKEKVRQAVEMVGAAKIFNSGNLPICWKFQFRQFADLPENSIPAI 96


>AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical
           protein C15F1.2 protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1

Query: 415 SLPEMFDSSFKITCSQQLFAELNLLQEKSLH 323
           SL  + ++SF+ + S++ F + NL+QEK  H
Sbjct: 683 SLRRLLNTSFEYSKSRECFHDANLIQEKCTH 713


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,351,440
Number of Sequences: 27780
Number of extensions: 290138
Number of successful extensions: 1032
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)