Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18j03f
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 79 4e-15
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 72 5e-13
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 72 5e-13
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 71 1e-12
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 65 4e-11
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 65 4e-11
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 65 4e-11
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 65 4e-11
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 65 4e-11
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 65 4e-11
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 65 4e-11
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 59 3e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 56 3e-08
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 56 3e-08
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 52 4e-07
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 52 4e-07
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 51 7e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 51 7e-07
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 51 1e-06
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 51 1e-06
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 51 1e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 50 1e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 50 2e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 48 7e-06
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 48 7e-06
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 48 7e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 47 2e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 46 2e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 46 2e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 4e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 8e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 1e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 43 3e-04
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 41 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 41 0.001
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 41 0.001
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 40 0.002
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 39 0.003
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 39 0.003
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 39 0.003
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 38 0.006
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.006
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.006
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.006
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 37 0.013
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 37 0.013
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 36 0.030
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.039
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.052
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.052
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 35 0.052
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.052
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.068
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.16
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 33 0.21
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.28
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 30 1.5
U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 30 1.5
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 30 1.5
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 30 1.5
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.9
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.9
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 1.9
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.9
U80843-12|AAB37961.2| 317|Caenorhabditis elegans Hypothetical p... 29 2.6
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 29 2.6
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 3.4
AF016665-8|AAC71178.1| 324|Caenorhabditis elegans Serpentine re... 29 3.4
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z78537-1|CAB01719.1| 182|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z66494-2|CAA91257.1| 821|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 28 7.9
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 7.9
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 28 7.9
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +1
Query: 487 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 666
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 667 GQPMKVQLSTSRVRQRPGM 723
G+ + ++ STS++R PGM
Sbjct: 62 GKVVNIKKSTSKLRPTPGM 80
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 432
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 433 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 534
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +1
Query: 487 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 666
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 667 GQPMKVQLSTSRVRQRPGM 723
G+ + ++ STS++R PGM
Sbjct: 62 GKVVNIKKSTSKLRPTPGM 80
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 432
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 433 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 534
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 71.7 bits (168), Expect = 5e-13
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +1
Query: 232 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 390
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 391 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 549
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 170
Query: 550 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 690
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 171 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 223
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 417
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 418 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 540
+ G +K+ +++K ++V NL + ++
Sbjct: 212 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 271
Query: 541 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 272 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 331
Query: 700 RVRQR 714
+ +R
Sbjct: 332 KEDRR 336
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Frame = +1
Query: 397 AIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 573
A+ +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 26 AMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS 85
Query: 574 CDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
C + + YGFVH + +AI+++NGM++ G+ + V R ++ +G
Sbjct: 86 CKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 143
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 71.7 bits (168), Expect = 5e-13
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +1
Query: 232 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 390
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 391 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 549
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 233
Query: 550 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 690
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
+++G+L E+ L F G V+ + R+ Y +V+ + A+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 412 NGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 585
N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 586 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
+ YGFVH + +AI+++NGM++ G+ + V R ++ +G
Sbjct: 154 DEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 206
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 417
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 418 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 540
+ G +K+ +++K ++V NL + ++
Sbjct: 275 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 334
Query: 541 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 394
Query: 700 RVRQR 714
+ +R
Sbjct: 395 KEDRR 399
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +1
Query: 232 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 390
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 391 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 549
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + ++F
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVF 233
Query: 550 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 690
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
+++G+L E+ L F G V+ + R+ Y +V+ + A+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 412 NGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 585
N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 586 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
+ YGFVH + +AI+++NGM++ G+ + V R ++ +G
Sbjct: 154 DEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 206
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 32/185 (17%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 417
+++ N D + L +F K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 418 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 540
+ G +K+ +++K ++V NL + ++
Sbjct: 275 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 334
Query: 541 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V +
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQR 394
Query: 700 RVRQR 714
+ +R
Sbjct: 395 KEDRR 399
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 67.7 bits (158), Expect = 8e-12
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Frame = +1
Query: 223 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 378
E ++ + F +F+G+LS + L+ F K+G V E ++R+ YGFV N
Sbjct: 126 EMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPN 185
Query: 379 EQVGREAIQNLNGELVHGQAIKIEAAKSR---------------KAPSTPTTKIFVGNLT 513
+Q AI +NG+ + +A++ A + + T ++VGN++
Sbjct: 186 KQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNIS 245
Query: 514 DKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 687
+T ++R+LF +G + E I + Y FV + AI E+NG + G +V+
Sbjct: 246 QQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGN--QVR 303
Query: 688 LSTSRVRQRP 717
S R + P
Sbjct: 304 CSWGRTQAVP 313
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLNGELVH 429
+++GN+S +TT+ADLR LF YG + E I + Y FV E ++ +AI +NG+ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMA 298
Query: 430 GQAIKIEAAKSRKAPS 477
G ++ +++ P+
Sbjct: 299 GNQVRCSWGRTQAVPN 314
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 217 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 372
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 488 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 373 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 474
EN Q AI +NG + + +K++ R P
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 217 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 372
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 488 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 373 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 474
EN Q AI +NG + + +K++ R P
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 217 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 372
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 417 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 476
Query: 373 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 474
EN Q AI +NG + + +K++ R P
Sbjct: 477 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+GFV + +AI +NG + + +KVQL R
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 507
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = +1
Query: 235 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 381
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+F KFG
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 562 TVVECDIVRN 591
+ +C ++R+
Sbjct: 167 HIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 448 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 217 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 372
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 488 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 373 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 474
EN Q AI +NG + + +K++ R P
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 63.7 bits (148), Expect = 1e-10
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREAIQNLNGE 420
+++GNL TE + LF + G+V + ++ + Y FV + +A+Q +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 421 LVHGQAIKIEAA-----KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 585
L+ + +K+ A + K +T +FVG+L+ + ++RE FQ FG V + ++
Sbjct: 108 LLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVI 167
Query: 586 RN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
R+ YGFV + AI+++NG + + ++ +T +
Sbjct: 168 RDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Frame = +1
Query: 223 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 378
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 126 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 185
Query: 379 EQVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFV 501
+ AI+ +NG+ + + I+ A + S T ++V
Sbjct: 186 REEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 245
Query: 502 GNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 672
GN+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 246 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +1
Query: 424 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---- 591
+H + + E P T ++VGNL + LF + G+V + ++ +
Sbjct: 26 MHSKLAEREGFHLGNGSDEPRT-LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSND 84
Query: 592 -YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 714
Y FV G + A++ +N ++ + MKV + +Q+
Sbjct: 85 PYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQ 126
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
++IG+L +EA L F G V+ + R+ Y +V+ + A+ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 412 NGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 585
N E++HG+ ++I + + A IF+ NL V + F FG ++ C +
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 586 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
+ YGFVH + AI+++NGM++ + + V R ++ +G
Sbjct: 179 DDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELG 231
Score = 54.4 bits (125), Expect = 8e-08
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Frame = +1
Query: 244 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAI 402
G IFI NL + F +G ++ C + + YGFVH E E + AI
Sbjct: 143 GNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAI 202
Query: 403 QNLNGELVHGQAI-------KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ +NG L+ + + + + K T +FV N + ++ +F KFG
Sbjct: 203 EKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFG 262
Query: 562 TVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 714
+ ++ + +GFV A+++LN +++G K LS R +++
Sbjct: 263 EITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK--LSVCRAQKK 318
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
++IG+L +EA L F G V+ + R+ Y +V+ + A+ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 412 NGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 585
N E++HG+ ++I + + A IF+ NL V + F FG ++ C +
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 586 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
+ YGFVH + AI+++NGM++ + + V R ++ +G
Sbjct: 179 DDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELG 231
Score = 54.4 bits (125), Expect = 8e-08
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Frame = +1
Query: 244 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAI 402
G IFI NL + F +G ++ C + + YGFVH E E + AI
Sbjct: 143 GNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAI 202
Query: 403 QNLNGELVHGQAI-------KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
+ +NG L+ + + + + K T +FV N + ++ +F KFG
Sbjct: 203 EKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFG 262
Query: 562 TVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 714
+ ++ + +GFV A+++LN +++G K LS R +++
Sbjct: 263 EITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK--LSVCRAQKK 318
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Frame = +1
Query: 223 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 378
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 13 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 72
Query: 379 EQVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFV 501
+ AI+ +NG+ + + I+ A + S T ++V
Sbjct: 73 REEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 132
Query: 502 GNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 672
GN+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 133 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +1
Query: 466 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 621
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 15 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Query: 622 DVNDAIKELNGMMVDGQPMKVQLSTSR 702
+ AI+++NG + + ++ +T +
Sbjct: 75 EAERAIEQMNGQWLGRRTIRTNWATRK 101
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Frame = +1
Query: 223 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 378
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 23 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 82
Query: 379 EQVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFV 501
+ AI+ +NG+ + + I+ A + S T ++V
Sbjct: 83 REEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 142
Query: 502 GNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 672
GN+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 143 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +1
Query: 466 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 621
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 25 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Query: 622 DVNDAIKELNGMMVDGQPMKVQLSTSR 702
+ AI+++NG + + ++ +T +
Sbjct: 85 EAERAIEQMNGQWLGRRTIRTNWATRK 111
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Frame = +1
Query: 223 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 378
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 94 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 153
Query: 379 EQVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFV 501
+ AI+ +NG+ + + I+ A + S T ++V
Sbjct: 154 REEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 213
Query: 502 GNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 672
GN+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 214 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 435
+++GNL TE + LF + G+V + ++ F M+ +N + GQ
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVI----FDEMK-----------VNWAVEPGQ 92
Query: 436 AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------- 591
+ K +T +FVG+L+ + ++RE FQ FG V + ++R+
Sbjct: 93 -------QQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 145
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
YGFV + AI+++NG + + ++ +T +
Sbjct: 146 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREAIQNLNGE 420
+F+ NL T+ L LF + G V++ I+ Y FV + A+Q+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGR 101
Query: 421 LVHGQAIKIEAAKSRKAP----STPTTK----IFVGNLTDKTRAPEVRELFQKFGTVVEC 576
+ + + + A + P S P T +FVG+L + + ++RE F KFG V E
Sbjct: 102 ELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEA 161
Query: 577 DIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
I+R+ YGFV D AI E+NG + + ++ +T +
Sbjct: 162 KIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +1
Query: 220 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHME 375
+ SK + F +F+G+L + LR F K+G V E I+R+ YGFV
Sbjct: 122 NRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYP 181
Query: 376 NEQVGREAIQNLNGELVHGQAIK 444
+ AI +NG + + I+
Sbjct: 182 RREDAERAIDEMNGAWLGRRTIR 204
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Frame = +1
Query: 238 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGR 393
G + I L T+ ++R LF G + C +VR+ YGFV+ E+
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 394 EAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 573
A+ + NG + + IK+ A+ + ++V + E+ +F+ FG ++
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYARPSN-DQIKGSNLYVSGIPKSMTLHELESIFRPFGQIIT 156
Query: 574 CDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDG 669
I+ + GFV D + + AIK LNG + G
Sbjct: 157 SRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSG 196
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREA 399
T + +F+ NLS T + L LF ++G +V I+R+ Y FV M N A
Sbjct: 371 TAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNA 430
Query: 400 IQNLNGELVHGQAIKI 447
+ +LNG + G+ +++
Sbjct: 431 MLSLNGTNLAGKTLQV 446
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +1
Query: 415 GELVHGQAIKIEAAKSRKAPSTPTTK--IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 588
G H Q + A+ + P + T +FV NL+ T + +LF +FG +V I+R
Sbjct: 348 GLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILR 407
Query: 589 N-------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
+ Y FV + + +A+ LNG + G+ ++V +S
Sbjct: 408 DLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSS 451
Score = 35.1 bits (77), Expect = 0.052
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +1
Query: 487 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 642
T + + L EVR LF G + C +VR+ YGFV+ D A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 643 ELNGMMVDGQPMKV 684
NG+ + + +KV
Sbjct: 102 SFNGLRLQNKTIKV 115
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +1
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
Q G+ + G A+ + P P ++ V N+ + R P+++ +F+KFG
Sbjct: 119 QQGQPVVATTAGSTNGSAAVTQPDPSTSSGPDGPK-RLHVSNIPFRFRDPDLKTMFEKFG 177
Query: 562 TVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 714
V + +I+ N +GFV ++ D A +EL+G M++G+ ++V +T+RV +
Sbjct: 178 VVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSK 234
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 244 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 405
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 406 NLNGELVHGQAIKIEAAKSR 465
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +1
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 561
Q G+ + G A+ + P P ++ V N+ + R P+++ +F+KFG
Sbjct: 119 QQGQPVVATTAGSTNGSAAVTQPDPSTSSGPDGPK-RLHVSNIPFRFRDPDLKTMFEKFG 177
Query: 562 TVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 714
V + +I+ N +GFV ++ D A +EL+G M++G+ ++V +T+RV +
Sbjct: 178 VVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSK 234
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 244 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 405
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 406 NLNGELVHGQAIKIEAAKSR 465
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 417
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 418 ELVHGQAIKIEAA 456
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 466 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 642
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 643 ELNGMMVDGQPMKVQLS 693
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 417
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 418 ELVHGQAIKIEAA 456
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 466 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 642
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 643 ELNGMMVDGQPMKVQLS 693
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELN 651
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 652 GMMVDGQPMKVQLSTSRVRQR 714
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +1
Query: 220 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENE 381
S S G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N
Sbjct: 90 STSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNP 149
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSR 465
A NG + G+ +++ A R
Sbjct: 150 DDADRARAEFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELN 651
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 652 GMMVDGQPMKVQLSTSRVRQR 714
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +1
Query: 220 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENE 381
S S G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N
Sbjct: 90 STSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNP 149
Query: 382 QVGREAIQNLNGELVHGQAIKIEAAKSR 465
A NG + G+ +++ A R
Sbjct: 150 DDADRARAEFNGTTIEGRRVEVNLATQR 177
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMM 660
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 661 VDGQPMKVQLSTSRVRQRPGMG 726
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMM 660
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 661 VDGQPMKVQLSTSRVRQRPGMG 726
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMM 660
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 661 VDGQPMKVQLSTSRVRQRPGMG 726
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 50.4 bits (115), Expect = 1e-06
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Frame = +1
Query: 235 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENEQVGR 393
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQ 646
Query: 394 EAIQNLNGELVHGQAIKIEAAKSRK------APSTPTTKIFVGNLTDKTRAPEVRELFQK 555
+A+ + V G+ + I A K + + +K+FV N+ + E++ LF K
Sbjct: 647 QALLK-DRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSK 705
Query: 556 FGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 714
FGTV V + FV D + + +M+ + ++V LS V++
Sbjct: 706 FGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNPPVKKD 765
Query: 715 PGMG 726
G
Sbjct: 766 KSHG 769
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 417
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 418 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 540
+ G +K+ +++K ++V NL + ++
Sbjct: 215 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 274
Query: 541 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 275 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 334
Query: 700 RVRQR 714
+ +R
Sbjct: 335 KEDRR 339
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Frame = +1
Query: 370 MENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELF 549
M G I+NL+ V + + + + T ++V N D + +LF
Sbjct: 114 MRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 173
Query: 550 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 690
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 174 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 226
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 432
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 433 QAIKIEAAKSR 465
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 669
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 670 QPMKVQLSTSR 702
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 432
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 433 QAIKIEAAKSR 465
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 669
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 670 QPMKVQLSTSR 702
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 432
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 433 QAIKIEAAKSR 465
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 669
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 670 QPMKVQLSTSR 702
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 412 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC-DIVR 588
N ++G+ IK+ A + + IFVGNL + + + F FG +++ I+R
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 589 NY------GFVHLD-ATGDVND-AIKELNGMMVDGQPMKVQLSTSR 702
+ GF ++ A+ + +D A++ +NG + + + V + R
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 412 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC-DIVR 588
N ++G+ IK+ A + + IFVGNL + + + F FG +++ I+R
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 589 NY------GFVHLD-ATGDVND-AIKELNGMMVDGQPMKVQLSTSR 702
+ GF ++ A+ + +D A++ +NG + + + V + R
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 190
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 48.0 bits (109), Expect = 7e-06
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 408
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 409 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 576
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 577 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+I+ R +GFV D V+ + + MV+G V+ S+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 48.0 bits (109), Expect = 7e-06
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 408
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 409 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 576
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 577 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+I+ R +GFV D V+ + + MV+G V+ S+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 48.0 bits (109), Expect = 7e-06
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 408
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 409 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 576
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 577 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+I+ R +GFV D V+ + + MV+G V+ S+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVRKGLSK 192
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Frame = +1
Query: 280 KTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 435
KTT+ + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 436 AIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVRELF-----QKFGTVVECDI----- 582
++ R P+ ++IFVG LTDK ++R++F T V D+
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKP 300
Query: 583 VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
R + FV L ++ + + I + V+G + + ++ R +G
Sbjct: 301 FRGFAFVTL-SSAEAAERIVSKGSLTVNGLSVGLSIAQPREENNQSVG 347
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLF----EKY-GTVVECDI-----VRNYGFVHMENEQVGREAI 402
+IF+G L+DK E LR +F + Y T V D+ R + FV + + + E I
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAA-ERI 318
Query: 403 QNLNGELVHGQAIKIEAAKSRK 468
+ V+G ++ + A+ R+
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPRE 340
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGM 657
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 658 MVDGQPMKVQLSTSRVRQRPG 720
DG+ ++V+ + + PG
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPG 90
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 238 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 405
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 406 NLNGELVHGQAIKIE 450
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 411
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q AI+NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 412 NGELVHGQAIKIEAA 456
NG + G+ +++++A
Sbjct: 80 NGYELSGRILRVDSA 94
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 648
+FVGN++ +R +F K G V+ +V + YGF+ AI+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 649 NGMMVDGQPMKV 684
NG + G+ ++V
Sbjct: 80 NGYELSGRILRV 91
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 411
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 412 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 567
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 411
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 412 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 567
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGM 657
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 658 MVDGQPMKVQLS 693
DG+ ++V+ +
Sbjct: 70 EFDGRRIRVEFT 81
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 238 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 405
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 406 NLNGELVHGQAIKIE 450
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 8e-05
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Frame = +1
Query: 244 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 399
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 400 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRA-PEVREL 546
+ +G+LV G+ +++ AK + PS G +T A P+V EL
Sbjct: 77 LDRTDGKLVDGRELRVTLAKYDR-PSDERGGRGGGGGRRRTAAEPDVAEL 125
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +1
Query: 463 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 615
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 616 TGDVNDAIKELNGMMVDGQPMKVQLS 693
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +1
Query: 244 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 399
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 400 IQNLNGELVHGQAIKIEAAK 459
+ +G+LV G+ +++ AK
Sbjct: 77 LDRTDGKLVDGRELRVTLAK 96
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +1
Query: 463 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 615
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 616 TGDVNDAIKELNGMMVDGQPMKVQLS 693
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 399
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 400 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 564
+ + +A++++ A + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 565 VVECDIVR 588
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 37.9 bits (84), Expect = 0.007
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Frame = +1
Query: 304 PLFEKYGTVVECDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPS 477
P YG++ NY + ME++ A+Q ++ A + R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 478 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 633
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 634 AIKELNGMMVDGQPMKVQLSTSRVRQRP 717
AI +NG + + +KVQL R RP
Sbjct: 486 AITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/66 (24%), Positives = 40/66 (60%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 432
+++IG L ++ ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 433 QAIKIE 450
+ + +E
Sbjct: 63 ERVILE 68
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 669
++++G L ++ +V F+ +G + + + +GFV D +DA+ +LNG + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 670 QPMKVQLSTSRV---RQRPGMG 726
+ + ++ +V +R G G
Sbjct: 63 ERVILEFPRRKVGYNEERSGSG 84
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 399
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 400 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 564
+ + +A++++ A + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 565 VVECDIVR 588
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 37.9 bits (84), Expect = 0.007
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Frame = +1
Query: 304 PLFEKYGTVVECDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPS 477
P YG++ NY + ME++ A+Q ++ A + R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 478 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 633
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 634 AIKELNGMMVDGQPMKVQLSTSRVRQRP 717
AI +NG + + +KVQL R RP
Sbjct: 486 AITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +1
Query: 250 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 405
F +++GN +TTE DL F + G V IV R + FV E + A+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 406 NLNGELVHGQAIKIEAAKSR 465
NG +G+A+++ A++R
Sbjct: 64 QFNGVDFNGRALRVNLAQNR 83
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 435
++I N+ + TE L LF++Y ++ V++Y F+H +A++ NG+ + G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 436 AIKIEAAK 459
++ AK
Sbjct: 439 VVEASLAK 446
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/67 (22%), Positives = 38/67 (56%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQ 672
+++ N+ + ++ ELF+++ ++ V++Y F+H + D A++E NG ++G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 673 PMKVQLS 693
++ L+
Sbjct: 439 VVEASLA 445
Score = 35.1 bits (77), Expect = 0.052
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 408
+I++G++ E L PLFEK G + + ++ R Y FV N++ A +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 409 LNG-ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 543
+G E+ G+ +K+ S T++F+GN+ E+ E
Sbjct: 261 YDGHEISTGKPLKVNV-------SIANTRLFIGNIPKTKSKDEILE 299
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 41.5 bits (93), Expect = 6e-04
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVEC--DIVRNYGFVHMENEQVGREAIQNLNGELV 426
++++G S + +R L + E DIV N H V ++ N L
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLLA 69
Query: 427 H--GQAIKIEAAKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGT----VVEC 576
G K+ AK P+ + + +FV ++ P+ EL+Q FG VV+C
Sbjct: 70 KFSGLFTKVNFAKKEPKPAENVMSNISNVFVRGISRDM--PDT-ELYQAFGGITDGVVQC 126
Query: 577 DIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL----STSRVRQRP 717
+ YGFV D + I E++G ++G+ + V + R R+RP
Sbjct: 127 HVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRKRKRP 177
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +1
Query: 481 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDA 636
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 637 IKELNGMMVDGQPMKVQLSTSRVRQRPGMG 726
+L +DG ++V S ++ P G
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTKRGHSPTPG 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +1
Query: 268 NLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGEL 423
NLS TTE DLR +F ++G + +CD+V R +GF++ + A L
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 424 VHGQAIKIEAAKSRKAPSTPTTKIFVGN 507
+ G I+++ + +++ S PT ++G+
Sbjct: 142 LDGHKIRVDFSLTKRGHS-PTPGQYMGD 168
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = +1
Query: 544 LFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV 705
+F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V L+T RV
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 706 RQR 714
+
Sbjct: 61 HNK 63
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 307 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 465
+FEK G VV+ +I+ N +GFV M+N A NG + G+ +++ A R
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +1
Query: 454 AKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLD 612
A++ +A P +FVG + +T ++R F+ +G + + +V R Y F+
Sbjct: 93 AENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYS 152
Query: 613 ATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQ 711
+++ A K+ +G+ VDG+ + V R ++
Sbjct: 153 DKAEMHTAYKKADGIKVDGKRLVVDYERGRTQK 185
Score = 35.1 bits (77), Expect = 0.052
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 414
+F+G ++ +T+E+ LR FE YG + + +V R Y F+ ++ A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 415 GELVHGQAIKIEAAKSRKAPSTPTTKIFVG-NLTDKTRAP----EVRELFQKFG 561
G V G+ + ++ + R + ++ G T KTR E RE+ FG
Sbjct: 166 GIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTREAKSVIEEREIASGFG 219
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Frame = +1
Query: 454 AKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV---------RNY 594
A R++P+ +P ++ + NL+ + E+F +G + D+ R Y
Sbjct: 118 ASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGY 177
Query: 595 GFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
G+V D D +IK ++G +DG + V+++ R
Sbjct: 178 GYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGR 213
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQ 405
++ I NLS + L +F YG + D+ R YG+V +N + ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 406 NLNGELVHGQAIKIEAAKSRKA 471
+++G + G A+ +E R++
Sbjct: 194 HMDGGQIDGMAVHVEMTIGRQS 215
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +1
Query: 247 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 402
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 403 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 576
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 282
Query: 577 DIVRNYGFVHLDATGDVNDAIKELNGMMV 663
D + Y +V + T +A + L G +
Sbjct: 283 DHGQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +1
Query: 247 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 402
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 403 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 576
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 282
Query: 577 DIVRNYGFVHLDATGDVNDAIKELNGMMV 663
D + Y +V + T +A + L G +
Sbjct: 283 DHGQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +1
Query: 247 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 402
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 403 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 576
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 205 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 259
Query: 577 DIVRNYGFVHLDATGDVNDAIKELNGMMV 663
D + Y +V + T +A + L G +
Sbjct: 260 DHGQPYAYVVYENTHTSQEACRSLRGACI 288
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGRE 396
+G F +++GN +TTE +L F G + + CD R + F+ E +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 397 AIQNLNGELVHGQAIKIEAA 456
A++ +NG +G+ +++ A
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 648
++VGN +T E+ F G + IV R + F+ G A++++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 649 NGMMVDGQPMKVQLS 693
NG +G+P++V L+
Sbjct: 67 NGAEFNGRPLRVNLA 81
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
I+IG LS +E D+ +F +YG V+ +++R+ + F+ ++++ A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 412 NGELVHGQAIKIEAAKSRKAP 474
NG +H + I+++ + K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 400 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKT-RAPEVRELFQKFGTVVEC 576
I NL G I + S K P ++F+GN+ ++ ELF+ FG ++
Sbjct: 56 ILNLVGSAAVNSDISYDT--SSKDPHMIRARVFIGNIARAIITRDDIIELFRPFGKIIAV 113
Query: 577 DIV--RNYGFVHLDATGDVNDAIKELNGM 657
+ + +GFV + G +++ + LNGM
Sbjct: 114 NYFAQQGFGFVQFNEAGSADESCRSLNGM 142
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 396
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 397 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 552
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 553 KFGTVVECDIV---RNYGFV 603
FGT+ + +I+ R GFV
Sbjct: 170 TFGTLDQVEILGQPRGLGFV 189
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 396
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 397 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 552
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 553 KFGTVVECDIV---RNYGFV 603
FGT+ + +I+ R GFV
Sbjct: 190 TFGTLDQVEILGQPRGLGFV 209
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 396
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 397 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 552
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 553 KFGTVVECDIV---RNYGFV 603
FGT+ + +I+ R GFV
Sbjct: 191 TFGTLDQVEILGQPRGLGFV 210
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 412 NGELVHGQAIKIEAAKS 462
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 481 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 636
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 637 IKELNGMMVDGQPMKVQLSTS 699
+++ +++D + + V S S
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 412 NGELVHGQAIKIEAAKS 462
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 481 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 636
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 637 IKELNGMMVDGQPMKVQLSTS 699
+++ +++D + + V S S
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 411
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 412 NGELVHGQAIKIEAAKS 462
+ L+ + I ++ ++S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 481 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 636
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 637 IKELNGMMVDGQPMKVQLSTS 699
+++ +++D + + V S S
Sbjct: 230 FFKMDNVLIDDRRIHVDFSQS 250
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 396
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 397 AIQNLNGELVHGQAIKIEAAKSRK 468
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +1
Query: 478 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 633
T TKIFVG L T + E F++FG + E ++ R YGFV +
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 634 AIKELNGMMVDGQPMKVQLS 693
A K+ N ++DG+ V L+
Sbjct: 92 ACKDPN-PIIDGRKANVNLA 110
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 408
KIF+G L T++ L FE++G + E ++ R YGFV M++ A ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 409 LNGELVHGQAIKIEAAKSRKAPST 480
N ++ G+ + A P T
Sbjct: 96 PN-PIIDGRKANVNLAYLGAKPRT 118
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +1
Query: 250 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 405
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 406 NLNGELVHGQAIKI 447
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +1
Query: 250 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 405
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 406 NLNGELVHGQAIKI 447
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 396
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 397 AIQNLNGELVHGQAIKIEAAKSRK 468
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 591
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.013
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 241 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC 339
TG ++F+GNL ++ E +L+ LF +G + EC
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 466 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 609
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +1
Query: 250 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 405
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 406 NLNGELVHGQAIK 444
+N + GQ ++
Sbjct: 267 GMNMFDLGGQYLR 279
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 35.9 bits (79), Expect = 0.030
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Frame = +1
Query: 364 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 543
+ +E E E IQN + + A + +KA + +F+GN+ + EV E
Sbjct: 22 MEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEVEE 79
Query: 544 LFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
F+ G +V I +N+ ++ D + + +A+ +NG + +P+ V T+
Sbjct: 80 HFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV---TA 135
Query: 700 RVRQRPGMG 726
+ PGMG
Sbjct: 136 KRTNIPGMG 144
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 411
+++G ++ TE L F +G VV I R +GFV + + AI N+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 412 NGELVHGQAIKIEAAKSRKA 471
N + G+ I++ A+ KA
Sbjct: 73 NESELFGKTIRVNFARPPKA 92
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVHMENEQVGREAIQNL 411
+F+ N+ ++ TE D+ F +YG + + ++ Y V E ++ EAI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 412 NGELVHGQAIKIE 450
N + GQ +K++
Sbjct: 117 NDTDLLGQNVKVD 129
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 396
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 648
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 125
Query: 649 NGMMVDGQPMKVQL 690
++ + K+ L
Sbjct: 126 TPKQLEFRSRKLNL 139
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 35.1 bits (77), Expect = 0.052
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 364 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 543
+ +E E + IQN + + A + +KA + +F+GN+ + E+ E
Sbjct: 16 MEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEIEE 73
Query: 544 LFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
F+ G +V+ I +N+ ++ D + + +A+ +NG + +P+ V T+
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV---TA 129
Query: 700 RVRQRPGMG 726
+ PGMG
Sbjct: 130 KRTNIPGMG 138
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 396
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 648
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 126
Query: 649 NGMMVDGQPMKVQL 690
++ + K+ L
Sbjct: 127 TPKQLEFRSRKLNL 140
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.068
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Frame = +1
Query: 256 IFIGNLSDKTTEADLRPLFEK-YGTVVEC--------------DIVRNYGFVHMENEQVG 390
+F+ NL+ TT+ L LF K YG +V+ + +GFV
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702
Query: 391 REAIQNLNGELVHGQAIKIEAAKSRKAPSTPT-------------TKIFVGNLTDKTRAP 531
+ A++++ GEL+ G +++++ + A TK+ V NL +
Sbjct: 703 KTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTKLLVRNLPFEASVK 762
Query: 532 EVRELFQKFGTVVECDIVRNYG 597
EV LF+ FG V I + G
Sbjct: 763 EVETLFETFGAVKTIRIPKKPG 784
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 247 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 348
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +1
Query: 247 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQ 405
T ++ + NL TE LR FEKYG + + + R + FV +E A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 406 NLNGELVHGQAIKIEAAK 459
N + + + +E +
Sbjct: 62 KSNQTFFNSKKLTVEECR 79
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 484 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFVHLDATGDVNDAIK 642
TT++ V NL ++R+ F+K+G + + + R + FV G ++A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 643 ELNGMMVDGQPMKVQ 687
+ N + + + V+
Sbjct: 62 KSNQTFFNSKKLTVE 76
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 693
+GFV D A+K++ G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +1
Query: 250 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR--------NYGFVHMENEQVGREAIQ 405
F++F G+L ++ ++ L F KY + + +VR YGFV + + A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 406 NLNGELVHGQAIKI 447
++G+ V + IK+
Sbjct: 263 EMDGKYVGNRPIKL 276
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 645
++F G+L ++ + + F+K+ + + +VR YGFV + D A++E
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 646 LNGMMVDGQPMKVQLSTSRVR 708
++G V +P+K++ S + R
Sbjct: 264 MDGKYVGNRPIKLRKSAWKER 284
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 217 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 372
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 324 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 383
Query: 373 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 474
EN Q AI +NG + + +K++ R P
Sbjct: 384 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 417
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 592 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 702
+GFV + +AI +NG + + +KVQL R
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 414
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 253 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 351
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 645
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 646 LNGMMVDGQPMKVQLS 693
LNGM + + + VQL+
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical
protein B0222.2 protein.
Length = 477
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 442 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATG 621
K++ + RK PS K +V L D+TR + R + + F T ++ GF H
Sbjct: 278 KLQNVQQRKTPSGKIRKFYVWLLPDRTRV-DGRNITKLFST-IQVFTACFAGFAH--GAN 333
Query: 622 DVNDAIKEL 648
DV++AI L
Sbjct: 334 DVSNAIAPL 342
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 645
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 646 LNGMMVDGQPMKVQLS 693
LNGM + + + VQL+
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 645
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 325
Query: 646 LNGMMVDGQPMKVQLS 693
LNGM + + + VQL+
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 490 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 645
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 328
Query: 646 LNGMMVDGQPMKVQLS 693
LNGM + + + VQL+
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 600
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 600
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 600
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 600
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>U80843-12|AAB37961.2| 317|Caenorhabditis elegans Hypothetical
protein C32B5.5 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/49 (20%), Positives = 27/49 (55%)
Frame = -1
Query: 314 SNSGLRSASVVLSERFPMKILKVPVPGILDSETHTFHEMSQQRLKRWYF 168
S S ++S++ + P+ ++K+P +L + + + ++ K+W+F
Sbjct: 144 SRSLSAASSLIANSCLPLSLIKLPFKSLLKTNNNPITSIVNRKTKKWHF 192
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.5 bits (63), Expect = 2.6
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 55 LVFIFLTCVIYCYSLYIVTH 114
L+F F++C ++ Y++Y+V H
Sbjct: 104 LIFFFISCTMFLYAVYLVKH 123
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +1
Query: 208 NVCVSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-------NYGFV 366
N+C + F + + ++ D +A+L +F+KY + + R GFV
Sbjct: 142 NLCFANDSYNPNSEFNLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFV 201
Query: 367 HMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 465
N+ + A+ ++ V G I ++ A SR
Sbjct: 202 RFGNQTDQQMALVEMHRTKVGGCRIILKLAGSR 234
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +1
Query: 457 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-----VRNYGFVHLDATG 621
+ K P +++ NL K E+ E+F KFG V + + R FV +
Sbjct: 9 RGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIF 68
Query: 622 DVNDAIKELNGMMVDGQPMKV 684
D A + L+G V + + V
Sbjct: 69 DAKTACEHLSGYNVSNRYLVV 89
>AF016665-8|AAC71178.1| 324|Caenorhabditis elegans Serpentine
receptor, class h protein250 protein.
Length = 324
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 55 LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYS 153
+ F+F+ CV+ Y + H I++NFI ++S
Sbjct: 249 MTFMFIPCVLLLYIVIFKYHNQILNNFIIILFS 281
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 349 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 465
+ + +V ENEQ AI LNG + +K+ A+ R
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Frame = +1
Query: 475 STP--TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGD 624
STP +T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
Query: 625 VNDAIKELNGMMVDGQPMKVQ 687
A+ LN V Q K+Q
Sbjct: 135 AAAAVDGLNTEGVQAQMAKLQ 155
>Z78537-1|CAB01719.1| 182|Caenorhabditis elegans Hypothetical
protein C09F12.1 protein.
Length = 182
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 55 LVFIFLTCVIYCYSLYIV---THVSIISNFIYPVYSLIFSEKYHRF 183
+V+ FLTC+ C YI+ T ++IS + + ++++ ++++F
Sbjct: 95 VVYNFLTCLACCCKKYIIHPLTLFAVISTILLLIAVIVYAAEWNQF 140
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 430 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 567
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 430 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 567
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z66494-2|CAA91257.1| 821|Caenorhabditis elegans Hypothetical
protein C34C6.2 protein.
Length = 821
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1
Query: 106 VTHVSIISN-FIYPVYSLIFSEKYHRFRRC*LIS*NVCVSESKMPGTGTFKIFIGNLSDK 282
V+ VS IS+ F++ + S I +E +IS +CVS + G + IG + D+
Sbjct: 713 VSDVSFISHHFVFTLLSAITTE---------VISIYICVSMISLTGLNKHHLRIGIIDDE 763
Query: 283 ---TTEADLRPLFEKYGTVVECDIVRN 354
T+E P F K+ D + N
Sbjct: 764 TVCTSECPFSPFFAKFTITDGVDFLNN 790
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +1
Query: 475 STPT-TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDV 627
+TP+ T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 628 NDAIKELNGMMVDGQPMKVQ 687
A+ LN V Q K+Q
Sbjct: 162 AAAVDGLNTEGVQAQMAKLQ 181
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 445 IEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 567
++ + +R + + +FVGN+ VR +F FGT+
Sbjct: 129 LQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTI 169
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 692 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 543
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 692 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 543
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 24 VYCVGNSWSLFGVHIFNLCYILLFFV 101
V+C +SLFGVH + ++LFFV
Sbjct: 638 VWCSIGMFSLFGVHATDNAIVVLFFV 663
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 692 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 543
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 532 EVRELFQKFGTVVECDIVRNY--GFVHLD--ATGDVNDAIKELNGMMVDGQPMKVQLSTS 699
E+ + QK+G V + + N+ G V + T + + A+K L+G +VDG+ + +L
Sbjct: 337 EMTQSCQKYGIVKKVVVYANHPDGVVSVTFPTTEESDMAVKYLHGRVVDGRKLTAELWDG 396
Query: 700 RVR 708
R +
Sbjct: 397 RTK 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,950,331
Number of Sequences: 27780
Number of extensions: 333210
Number of successful extensions: 1455
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -