Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18i13f
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77225-1|CAA54442.1| 376|Homo sapiens TFIIA/alpha, p55 protein. 65 3e-10
X75383-1|CAA53151.1| 376|Homo sapiens TFIIA protein. 65 3e-10
D14887-1|BAA03604.1| 376|Homo sapiens 'TFIIA-42' protein. 65 3e-10
BC107156-1|AAI07157.1| 376|Homo sapiens general transcription f... 65 3e-10
BC107155-1|AAI07156.1| 376|Homo sapiens general transcription f... 65 3e-10
AC010582-2|AAF26776.1| 376|Homo sapiens TFIIA-42 protein. 65 3e-10
BC064585-1|AAH64585.1| 477|Homo sapiens GTF2A1L protein protein. 64 5e-10
BC025991-1|AAH25991.1| 478|Homo sapiens TFIIA-alpha/beta-like f... 64 5e-10
AK223350-1|BAD97070.1| 478|Homo sapiens TFIIA-alpha/beta-like f... 64 5e-10
AF106857-1|AAD39634.1| 478|Homo sapiens TFIIA large subunit iso... 64 5e-10
BC101774-1|AAI01775.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 64 7e-10
BC101772-1|AAI01773.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 64 7e-10
AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein. 64 7e-10
AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein. 64 7e-10
AY032980-1|AAL62340.1| 242|Homo sapiens Angrgm-52 protein. 31 4.5
>X77225-1|CAA54442.1| 376|Homo sapiens TFIIA/alpha, p55 protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI+ VR+ FLDDGVDEQVL ELK LW+ KL S A D
Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVD 57
>X75383-1|CAA53151.1| 376|Homo sapiens TFIIA protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI+ VR+ FLDDGVDEQVL ELK LW+ KL S A D
Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVD 57
>D14887-1|BAA03604.1| 376|Homo sapiens 'TFIIA-42' protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI+ VR+ FLDDGVDEQVL ELK LW+ KL S A D
Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVD 57
>BC107156-1|AAI07157.1| 376|Homo sapiens general transcription
factor IIA, 1, 19/37kDa protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI+ VR+ FLDDGVDEQVL ELK LW+ KL S A D
Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVD 57
>BC107155-1|AAI07156.1| 376|Homo sapiens general transcription
factor IIA, 1, 19/37kDa protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI+ VR+ FLDDGVDEQVL ELK LW+ KL S A D
Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVD 57
>AC010582-2|AAF26776.1| 376|Homo sapiens TFIIA-42 protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI+ VR+ FLDDGVDEQVL ELK LW+ KL S A D
Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVD 57
>BC064585-1|AAH64585.1| 477|Homo sapiens GTF2A1L protein protein.
Length = 477
Score = 64.1 bits (149), Expect = 5e-10
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 6 VPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 53
>BC025991-1|AAH25991.1| 478|Homo sapiens TFIIA-alpha/beta-like
factor protein.
Length = 478
Score = 64.1 bits (149), Expect = 5e-10
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 7 VPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 54
>AK223350-1|BAD97070.1| 478|Homo sapiens TFIIA-alpha/beta-like
factor isoform 1 variant protein.
Length = 478
Score = 64.1 bits (149), Expect = 5e-10
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 7 VPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 54
>AF106857-1|AAD39634.1| 478|Homo sapiens TFIIA large subunit
isoform ALF protein.
Length = 478
Score = 64.1 bits (149), Expect = 5e-10
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = +3
Query: 339 VLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
V KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 7 VPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 54
>BC101774-1|AAI01775.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 63.7 bits (148), Expect = 7e-10
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +3
Query: 345 KLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 713 KLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 758
>BC101772-1|AAI01773.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 63.7 bits (148), Expect = 7e-10
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +3
Query: 345 KLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 713 KLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 758
>AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein.
Length = 1182
Score = 63.7 bits (148), Expect = 7e-10
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +3
Query: 345 KLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 713 KLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 758
>AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein.
Length = 1182
Score = 63.7 bits (148), Expect = 7e-10
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +3
Query: 345 KLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
KLY V++DVI GVRN F ++G++EQVL++LKQLW+TK+ S AT+
Sbjct: 713 KLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATE 758
>AY032980-1|AAL62340.1| 242|Homo sapiens Angrgm-52 protein.
Length = 242
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 83 LK*ATLATYYLKYIKLVINISELTNCVNS 169
LK +T A+Y IKL+ N++ L NC NS
Sbjct: 40 LKTSTQASYQYMVIKLIPNVNGLNNCTNS 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,062,578
Number of Sequences: 237096
Number of extensions: 1716949
Number of successful extensions: 4216
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4205
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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