Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18i13f
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061325-1|AAL28873.1|  366|Drosophila melanogaster LD24213p pro...    73   4e-13
AE014297-4101|AAN14105.1|  363|Drosophila melanogaster CG5930-PB...    73   4e-13
AE014297-4100|AAF56687.2|  366|Drosophila melanogaster CG5930-PA...    73   4e-13
AY059450-1|AAL13356.1|  735|Drosophila melanogaster LD15404p pro...    31   2.2  
AE014298-2792|AAF48907.2|  735|Drosophila melanogaster CG32541-P...    31   2.2  
AE014297-4102|AAN14106.1|  324|Drosophila melanogaster CG5930-PC...    30   3.0  
U10070-1|AAC13765.1|  887|Drosophila melanogaster villin-like pr...    29   9.1  
AY121684-1|AAM52011.1|  887|Drosophila melanogaster RE36860p pro...    29   9.1  
AE014134-2860|AAN10991.1|  888|Drosophila melanogaster CG6433-PB...    29   9.1  
AE014134-2859|AAF53623.1|  887|Drosophila melanogaster CG6433-PA...    29   9.1  

>AY061325-1|AAL28873.1|  366|Drosophila melanogaster LD24213p
           protein.
          Length = 366

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 32/55 (58%), Positives = 45/55 (81%)
 Frame = +3

Query: 318 MTTSQLAVLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
           M   Q +VLK+Y+ V++DVI+ VR++FLD+GVDEQVLQE+KQ+W+ KL AS A +
Sbjct: 1   MALCQTSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVE 55



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 534 QKVNGSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPG 704
           Q+VN  N          +  Q++  A +S          LDPN  +PV +TLP+  G
Sbjct: 132 QEVNSQNPPPLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRIMPVNITLPSPAG 188


>AE014297-4101|AAN14105.1|  363|Drosophila melanogaster CG5930-PB,
           isoform B protein.
          Length = 363

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 32/55 (58%), Positives = 45/55 (81%)
 Frame = +3

Query: 318 MTTSQLAVLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
           M   Q +VLK+Y+ V++DVI+ VR++FLD+GVDEQVLQE+KQ+W+ KL AS A +
Sbjct: 1   MALCQTSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVE 55



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 534 QKVNGSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPG 704
           Q+VN  N          +  Q++  A +S          LDPN  +PV +TLP+  G
Sbjct: 129 QEVNSQNPPPLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRIMPVNITLPSPAG 185


>AE014297-4100|AAF56687.2|  366|Drosophila melanogaster CG5930-PA,
           isoform A protein.
          Length = 366

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 32/55 (58%), Positives = 45/55 (81%)
 Frame = +3

Query: 318 MTTSQLAVLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATD 482
           M   Q +VLK+Y+ V++DVI+ VR++FLD+GVDEQVLQE+KQ+W+ KL AS A +
Sbjct: 1   MALCQTSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVE 55



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 534 QKVNGSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPG 704
           Q+VN  N          +  Q++  A +S          LDPN  +PV +TLP+  G
Sbjct: 132 QEVNSQNPPPLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRIMPVNITLPSPAG 188


>AY059450-1|AAL13356.1|  735|Drosophila melanogaster LD15404p
           protein.
          Length = 735

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 546 GSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPGVS 710
           G N  H    +GH      +++  SS  G    H++ P++   ++  +PA P  S
Sbjct: 107 GHNHGHAAATLGHPHSHSHNNSSGSSSHGHVGSHLIFPDDMDSIEFCMPAAPSSS 161


>AE014298-2792|AAF48907.2|  735|Drosophila melanogaster CG32541-PA
           protein.
          Length = 735

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 546 GSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPGVS 710
           G N  H    +GH      +++  SS  G    H++ P++   ++  +PA P  S
Sbjct: 107 GHNHGHAAATLGHPHSHSHNNSSGSSSHGHVGSHLIFPDDMDSIEFCMPAAPSSS 161


>AE014297-4102|AAN14106.1|  324|Drosophila melanogaster CG5930-PC,
           isoform C protein.
          Length = 324

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 534 QKVNGSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPG 704
           Q+VN  N          +  Q++  A +S          LDPN  +PV +TLP+  G
Sbjct: 90  QEVNSQNPPPLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRIMPVNITLPSPAG 146


>U10070-1|AAC13765.1|  887|Drosophila melanogaster villin-like
           protein protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 378 SGVRNSFLDDGVDEQVLQELKQLWKTKL 461
           SG   + +DDG ++ + QE K+LW T L
Sbjct: 223 SGSPITIVDDGYEQAMSQEHKELWNTML 250


>AY121684-1|AAM52011.1|  887|Drosophila melanogaster RE36860p
           protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 378 SGVRNSFLDDGVDEQVLQELKQLWKTKL 461
           SG   + +DDG ++ + QE K+LW T L
Sbjct: 223 SGSPITIVDDGYEQAMSQEHKELWNTML 250


>AE014134-2860|AAN10991.1|  888|Drosophila melanogaster CG6433-PB,
           isoform B protein.
          Length = 888

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 378 SGVRNSFLDDGVDEQVLQELKQLWKTKL 461
           SG   + +DDG ++ + QE K+LW T L
Sbjct: 224 SGSPITIVDDGYEQAMSQEHKELWNTML 251


>AE014134-2859|AAF53623.1|  887|Drosophila melanogaster CG6433-PA,
           isoform A protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 378 SGVRNSFLDDGVDEQVLQELKQLWKTKL 461
           SG   + +DDG ++ + QE K+LW T L
Sbjct: 223 SGSPITIVDDGYEQAMSQEHKELWNTML 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,620,141
Number of Sequences: 53049
Number of extensions: 531963
Number of successful extensions: 1396
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)