Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18h11f
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11 pr...    32   2.6  
BC001726-1|AAH01726.2|  408|Homo sapiens NOL11 protein protein.        32   2.6  
AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.                  32   2.6  
AL110271-1|CAB53709.1|  314|Homo sapiens hypothetical protein pr...    32   2.6  
AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens ...    32   2.6  

>BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11
           protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 529 PLFPVDDQIKGLLKLGLTERSICAQIIPNLLEKGDFVNIMCTIRKFSDIPESVLVSILK 705
           P F   + +  L++  +   S+C  ++   L+K D   +   +++F DIPESV  + LK
Sbjct: 448 PSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQFPDIPESVTCACLK 506


>BC001726-1|AAH01726.2|  408|Homo sapiens NOL11 protein protein.
          Length = 408

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 529 PLFPVDDQIKGLLKLGLTERSICAQIIPNLLEKGDFVNIMCTIRKFSDIPESVLVSILK 705
           P F   + +  L++  +   S+C  ++   L+K D   +   +++F DIPESV  + LK
Sbjct: 137 PSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQFPDIPESVTCACLK 195


>AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 529 PLFPVDDQIKGLLKLGLTERSICAQIIPNLLEKGDFVNIMCTIRKFSDIPESVLVSILK 705
           P F   + +  L++  +   S+C  ++   L+K D   +   +++F DIPESV  + LK
Sbjct: 448 PSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQFPDIPESVTCACLK 506


>AL110271-1|CAB53709.1|  314|Homo sapiens hypothetical protein
           protein.
          Length = 314

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 529 PLFPVDDQIKGLLKLGLTERSICAQIIPNLLEKGDFVNIMCTIRKFSDIPESVLVSILK 705
           P F   + +  L++  +   S+C  ++   L+K D   +   +++F DIPESV  + LK
Sbjct: 43  PSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQFPDIPESVTCACLK 101


>AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13640 fis, clone PLACE1011221. ).
          Length = 719

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 529 PLFPVDDQIKGLLKLGLTERSICAQIIPNLLEKGDFVNIMCTIRKFSDIPESVLVSILK 705
           P F   + +  L++  +   S+C  ++   L+K D   +   +++F DIPESV  + LK
Sbjct: 448 PSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQFPDIPESVTCACLK 506


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,556,138
Number of Sequences: 237096
Number of extensions: 2430726
Number of successful extensions: 6163
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6163
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)