Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18h11f
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.2  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   5.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 115 NWFPCKLFFLRRLHHLVIFLSDSVLFSLD 29
           NW P    +LRR    +    D +LF+++
Sbjct: 108 NWQPIATKYLRRYEDNIFLPEDCLLFTIE 136


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 115 NWFPCKLFFLRRLHHLVIFLSDSVLFSLD 29
           NW P    +LRR    +    D +LF+++
Sbjct: 123 NWQPIATKYLRRYEDNIFLPEDCLLFTIE 151


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 237 GQKPSHPIWQQHGSRWSHNSRLQYYFRSRIL 329
           G+KP   +W  +  R    S  +Y  R  IL
Sbjct: 802 GEKPIGILWNMNNKRLDPKSDSRYTIREEIL 832


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 78  KRRRKNNLHGNQLCL 122
           K+RRK NL+ NQ+ +
Sbjct: 8   KKRRKKNLNQNQMMI 22


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 406 NHIGMLPYILETKRNLSSLLGSHEVILDEETEI 504
           N IG    + +TK  L ++L +H+V + E+T I
Sbjct: 443 NCIGARFAVYQTKVGLITILRNHKVEVCEKTII 475


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +1

Query: 673 IPESVLVSILKYAVKLVQSENVDITKPE 756
           +P+ V  + LK+ ++ V    +D+++ E
Sbjct: 77  MPQDVCFNDLKFIIEFVYRGEIDVSQAE 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,444
Number of Sequences: 438
Number of extensions: 4747
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)