Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18h02f
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 27 0.19
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.25
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.25
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 4.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.4
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 7.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 7.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.2
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 9.5
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.5
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.5
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.6 bits (56), Expect = 0.19
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 360 SLGNNYRARYYDGRISNDHGRNSRLFFNI 274
SL NNY Y+ +N + N +L++NI
Sbjct: 84 SLSNNYNYSNYNNYNNNYNNYNKKLYYNI 112
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 420 VHWARGHNGGVSHDHRGYT 364
+HW GHNGG S GYT
Sbjct: 1422 LHWKSGHNGGAS--LTGYT 1438
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 489 HWARGHNGRVS 457
HW GHNG S
Sbjct: 1423 HWKSGHNGGAS 1433
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 420 VHWARGHNGGVSHDHRGYT 364
+HW GHNGG S GYT
Sbjct: 1418 LHWKSGHNGGAS--LTGYT 1434
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 489 HWARGHNGRVS 457
HW GHNG S
Sbjct: 1419 HWKSGHNGGAS 1429
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 402 HNGGVSHDHRGYTRSLGNNYRARYYD 325
+N ++++ Y + NNY+ YY+
Sbjct: 330 NNNNYNNNYNNYNNNNYNNYKKLYYN 355
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 3.1
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -1
Query: 531 PRTTGDTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY-TRSL 355
P T G + + H+ H H G H + + G G H H + T+SL
Sbjct: 302 PGVYPSTAGFLPPSYHPHQHHPSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSL 361
Query: 354 GN-NYR 340
+ +YR
Sbjct: 362 QHLHYR 367
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ +GP + +P H+GPL P
Sbjct: 125 GNFPPRPMGPWISIQEQIPRFRHIGPLTP 153
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -1
Query: 384 HDHRGYTRSLGNNYRARYYD 325
H++ Y + NNY+ YY+
Sbjct: 91 HNNNNYNNNNYNNYKKLYYN 110
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ +GP + +P H+GPL P
Sbjct: 366 GNFPPRPMGPWISIQEQIPRFRHIGPLTP 394
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GHYESPDVGPALVEAPIVPSPVHVGPLVP 183
G++ S +GP + +P H+GP P
Sbjct: 133 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 161
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -1
Query: 384 HDHRGYTRSLGNNYRARYYD 325
+++ Y + NNY+ YY+
Sbjct: 335 NNYNNYNNNYNNNYKKLYYN 354
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 387 SHDHRGYTRSLGNNYRARYYD 325
++++ Y + NNYR YY+
Sbjct: 90 NYNNNNYKKLYCNNYRKLYYN 110
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 148 VPSPVHVGPLVPGQLTPLVHI 210
VP P+H G P + P + I
Sbjct: 346 VPVPIHCGNFPPRPMGPWISI 366
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 91 KRGHYESPDVG 123
KRG YE P VG
Sbjct: 610 KRGKYEEPTVG 620
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -1
Query: 492 EHWARGHNGR-VSHDHG 445
E+ +RGH+G+ SH HG
Sbjct: 391 ENNSRGHSGQSSSHHHG 407
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 94 RGHYESPDVGPAL 132
RGH E VGPA+
Sbjct: 142 RGHIEDDYVGPAM 154
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -1
Query: 540 GVXPRTTGDTDGHVTDEHWARGHN 469
G+ TGD G + HW H+
Sbjct: 102 GIIIAYTGDVHGVIGAGHWIGDHD 125
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 249 NGGSAGSIVDVNKNVDERGKLSRN 178
N S++D N VD +++RN
Sbjct: 296 NSQGPSSVIDTNTGVDYFTQINRN 319
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.313 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,540
Number of Sequences: 438
Number of extensions: 2425
Number of successful extensions: 26
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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