Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18g19f
(1124 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 32 0.13
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 30 0.68
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 3.6
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 6.3
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 27 6.3
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 26 8.3
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 32.3 bits (70), Expect = 0.13
Identities = 38/147 (25%), Positives = 56/147 (38%)
Frame = +1
Query: 298 ILATSNVTGLIM*SVETEPFQKTTMMLIVKVTMAVEETETKTITLEMDTPTPAWLLKYVL 477
+ T TG ++T T IV VT TET T+T+ TPT
Sbjct: 858 VTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV---TPTGT-----ST 909
Query: 478 KKIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTT 657
V +P + T++ V + + T ++TG ++T + T
Sbjct: 910 GTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTVTPTGTSTGTTTVVIQTPTTVTAT 969
Query: 658 RMLIVKVTMAVEETETKTITLEMDTPT 738
IV VT TET T+T+ TPT
Sbjct: 970 ETDIVTVTTGYTGTETSTVTV---TPT 993
Score = 32.3 bits (70), Expect = 0.13
Identities = 38/147 (25%), Positives = 56/147 (38%)
Frame = +1
Query: 298 ILATSNVTGLIM*SVETEPFQKTTMMLIVKVTMAVEETETKTITLEMDTPTPAWLLKYVL 477
+ T TG ++T T IV VT TET T+T+ TPT
Sbjct: 902 VTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV---TPTGT-----ST 953
Query: 478 KKIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTT 657
V +P + T++ V + + T ++TG ++T + T
Sbjct: 954 GTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTVTPTGTSTGTTTVVIQTPTTVTAT 1013
Query: 658 RMLIVKVTMAVEETETKTITLEMDTPT 738
IV VT TET T+T+ TPT
Sbjct: 1014 ETDIVTVTTGYTGTETSTVTV---TPT 1037
Score = 32.3 bits (70), Expect = 0.13
Identities = 38/147 (25%), Positives = 56/147 (38%)
Frame = +1
Query: 298 ILATSNVTGLIM*SVETEPFQKTTMMLIVKVTMAVEETETKTITLEMDTPTPAWLLKYVL 477
+ T TG ++T T IV VT TET T+T+ TPT
Sbjct: 946 VTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV---TPTGT-----ST 997
Query: 478 KKIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTT 657
V +P + T++ V + + T ++TG ++T + T
Sbjct: 998 GTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTVTPTGTSTGTTTVVIQTPTTVTAT 1057
Query: 658 RMLIVKVTMAVEETETKTITLEMDTPT 738
IV VT TET T+T+ TPT
Sbjct: 1058 ETDIVTVTTGYTGTETSTVTV---TPT 1081
Score = 32.3 bits (70), Expect = 0.13
Identities = 38/147 (25%), Positives = 56/147 (38%)
Frame = +1
Query: 298 ILATSNVTGLIM*SVETEPFQKTTMMLIVKVTMAVEETETKTITLEMDTPTPAWLLKYVL 477
+ T TG ++T T IV VT TET T+T+ TPT
Sbjct: 990 VTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV---TPTGT-----ST 1041
Query: 478 KKIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTT 657
V +P + T++ V + + T ++TG ++T + T
Sbjct: 1042 GTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTVTPTGTSTGTTTVVIQTPTTVTAT 1101
Query: 658 RMLIVKVTMAVEETETKTITLEMDTPT 738
IV VT TET T+T+ TPT
Sbjct: 1102 ETDIVTVTTGYTGTETSTVTV---TPT 1125
Score = 31.1 bits (67), Expect = 0.29
Identities = 37/143 (25%), Positives = 55/143 (38%)
Frame = +1
Query: 310 SNVTGLIM*SVETEPFQKTTMMLIVKVTMAVEETETKTITLEMDTPTPAWLLKYVLKKIQ 489
+ TG ++T T IV VT TET T+T+ TPT
Sbjct: 818 TGTTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV---TPTGT-----STGTTT 869
Query: 490 TVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTTRMLI 669
V +P + T++ V + + T ++TG ++T + T I
Sbjct: 870 VVIQTPTTVTATETDIVTVTTGYTGTETSTVTVTPTGTSTGTTTVVIQTPTTVTATETDI 929
Query: 670 VKVTMAVEETETKTITLEMDTPT 738
V VT TET T+T+ TPT
Sbjct: 930 VTVTTGYTGTETSTVTV---TPT 949
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 583 IILITSSATGLIM*SVETESFQKTTRMLIVKVTMAVEETETKTITLEMDTPT 738
+ +I + TG ++T + T IV VT TET T+T+ TPT
Sbjct: 813 VTVIPTGTTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV---TPT 861
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.9 bits (64), Expect = 0.68
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +1
Query: 364 TTMMLIVKVTMAVEETETKTITLEMDTPTPAWLLKYVLKKIQTVFWSPMSTAPDFTNVSI 543
T M I +T +EET T T +E T P + + + T+ +T P +I
Sbjct: 58 TPMEEITTITTPMEETTTITPMVETTTILPMAAMTTPMVETTTIPTVETTTTPMVETTTI 117
Query: 544 VIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTTRMLIVKVTMAVEETETKTITLE 723
P +++ I + + L+ ++ T + TT + + +T +EET T T +E
Sbjct: 118 T---P--MVETTTITPMVEAMITLMEETMTTPMEETTTILPMAAMTTPMEETTTTTPMVE 172
Query: 724 MDT-PT 738
T PT
Sbjct: 173 TTTIPT 178
Score = 29.5 bits (63), Expect = 0.90
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Frame = +1
Query: 346 TEPFQKTTMMLIVKVTMAVEETETKTITL-EMDTPTPAWLLKYVLKKIQTVFWSPMSTAP 522
T P ++TT + T + ET T + E T P + +++ T +T P
Sbjct: 158 TTPMEETTTTTPMVETTTIPTVETMTTPMVEAMTILPMAAMTTPMEETTTTPMEETTTTP 217
Query: 523 DF-TNVSIVIQ*PSFVLQICCIILITSSATGLIM*SVETESFQKTTRMLIVKVTMAVEET 699
T ++ +++ + ++ ++++ T M ++ T + + TT + +T VEET
Sbjct: 218 MVETMITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTT-LPTAAMTTPVEET 276
Query: 700 ETKTITLEMDTPT 738
T + M TPT
Sbjct: 277 TTTPMVETMITPT 289
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.5 bits (58), Expect = 3.6
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Frame = +1
Query: 427 TLEMDTPTPAWLLKYVLK---KIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQIC---CII 588
T+ +D PTP+W+ + V T +P+ T V + I PS+V + I
Sbjct: 673 TVLVDVPTPSWITETVTSGSVGFTTTIATPIGTTAG--TVLVDIPTPSWVTETVTSGSIG 730
Query: 589 LITSSAT------GLIM*SVETESF-QKTTRMLIVKVTMAVEETETKTI-TLEMDTPTPA 744
T+ AT G ++ V T S+ +T V T + T T+ +D PTP+
Sbjct: 731 FTTTIATPIGSTAGTVLVDVPTPSWVTETVTSGSVGFTTTIATPIGSTAGTVLVDIPTPS 790
Query: 745 WLLKYV 762
W+ + V
Sbjct: 791 WVTETV 796
Score = 27.5 bits (58), Expect = 3.6
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 14/126 (11%)
Frame = +1
Query: 427 TLEMDTPTPAWLLKYVLKK---IQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICC---II 588
T+ +D PTP+W+ + V T +P+ T V + I PS+V + +
Sbjct: 889 TVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAG--TVLVDIPTPSWVTETVTSGSVG 946
Query: 589 LITSSAT------GLIM*SVETESF--QKTTRMLIVKVTMAVEETETKTITLEMDTPTPA 744
T+ AT G ++ + T S+ + T + T T T+ +D PTP+
Sbjct: 947 FTTTIATPIGTTAGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLVDIPTPS 1006
Query: 745 WLLKYV 762
W+ + V
Sbjct: 1007 WVTETV 1012
Score = 27.1 bits (57), Expect = 4.8
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 14/126 (11%)
Frame = +1
Query: 427 TLEMDTPTPAWLLKYVLK---KIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQ-------- 573
T+ +D PTP+W+ + V T +P+ T V + + PS+V +
Sbjct: 817 TVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAG--TVVVDVPTPSWVTETVTSGSVG 874
Query: 574 -ICCIILITSSATGLIM*SVETESF--QKTTRMLIVKVTMAVEETETKTITLEMDTPTPA 744
I S G ++ + T S+ + T + T T T+ +D PTP+
Sbjct: 875 FTTTIATPIGSTAGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLVDIPTPS 934
Query: 745 WLLKYV 762
W+ + V
Sbjct: 935 WVTETV 940
Score = 26.6 bits (56), Expect = 6.3
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Frame = +1
Query: 427 TLEMDTPTPAWLLKYVLKKIQTVFWSPMSTAPDFT--NVSIVIQ*PSFVLQIC---CIIL 591
T+ +D PTP+W+ + V F + ++T T V + I PS+V + +
Sbjct: 853 TVVVDVPTPSWVTETVTSG-SVGFTTTIATPIGSTAGTVLVDIPTPSWVTETVTSGSVGF 911
Query: 592 ITSSAT------GLIM*SVETESF--QKTTRMLIVKVTMAVEETETKTITLEMDTPTPAW 747
T+ AT G ++ + T S+ + T + T T T+ +D PTP+W
Sbjct: 912 TTTIATPVGTTAGTVLVDIPTPSWVTETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSW 971
Query: 748 LLKYV 762
+ + V
Sbjct: 972 VTETV 976
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 6.3
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Frame = +1
Query: 427 TLEMDTPTPAWLLKYVLKKIQTVFWSPMSTAPDFT--NVSIVIQ*PSFVLQIC---CIIL 591
T+ +D PTP+W+ + V F + ++T T V + I PS+V + +
Sbjct: 644 TVVVDIPTPSWVTETVTSG-SVGFTTTIATPVGSTAGTVLVDIPTPSWVTETVTSGSVEF 702
Query: 592 ITSSAT------GLIM*SVETESF--QKTTRMLIVKVTMAVEETETKTITLEMDTPTPAW 747
T+ AT G ++ + T S+ + T + T T T+ +D PTP+W
Sbjct: 703 TTTIATPVGTTAGTVVVDIPTPSWVTETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSW 762
Query: 748 LLKYV 762
+ + V
Sbjct: 763 VTETV 767
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 445 PTPAWLLKYVLKKIQTVFWSPMSTAPDFTNVSIVIQ*PSFVLQICCI 585
PTP W L YV ++ F +S N+ + + P FVL C +
Sbjct: 75 PTPGWPLNYVFGNERSRFEKILSNFV-LRNLMLQVLAPCFVLLWCAV 120
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 8.3
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 453 SLATEIC-AEKDSDGVLVAHEHCTRFYKCFDSH--PVALICPPNL 578
S AT + E D D L+ H H T +K F+ H + L+ P+L
Sbjct: 294 SAATSLAPVEDDEDDELLLHRHITNKHKDFNLHVKQLGLLHKPSL 338
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,818,794
Number of Sequences: 5004
Number of extensions: 69890
Number of successful extensions: 221
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 597654600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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