Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18g19f
(1124 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 57 3e-08
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 44 2e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 42 8e-04
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 42 8e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 35 0.12
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.49
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 33 0.49
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 33 0.49
AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical ... 32 0.85
L10990-7|AAB59174.1| 378|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC006679-14|AAK84462.2| 421|Caenorhabditis elegans Hypothetical... 29 6.0
U97008-10|AAB52315.2| 494|Caenorhabditis elegans Cytochrome p45... 29 7.9
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 2/151 (1%)
Frame = +3
Query: 183 CARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECGDRTIP 359
C +G DG+ RF C G + CP +L+++ + E CDW HNV ECG+
Sbjct: 25 CTNVG-DGMYPLGACEPRFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE--G 81
Query: 360 XXXXXXXXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCF 539
+ L +C E DGV + + + C
Sbjct: 82 EENEFSGDGSGESSGDEEITFGDSSGESSGDELLENVC-ESLKDGVYSSGTCSSSYIICN 140
Query: 540 DSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
P L C L+Y+P N++C W + EC
Sbjct: 141 SGSPRFLSCSTPLIYDPTNKKCSWKGMIDEC 171
Score = 53.2 bits (122), Expect = 3e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +3
Query: 114 VIKENTNK--ATKGVNFESGKAT-EICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPP 284
+I + TNK + KG+ E + + E C SDG + E F+ C+EG CP
Sbjct: 153 LIYDPTNKKCSWKGMIDECSQVSGEYCE---SDGNISKSECSNVFFSCSEGIAHRRNCPA 209
Query: 285 NLLFNPSNEQCDWPHNV-ECGDRT 353
NL+FNP+ CDWP NV +C +++
Sbjct: 210 NLVFNPAISSCDWPKNVMDCSEKS 233
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 483 DSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-ECGDR 638
+SDG + E F+ C + CP NL++NP CDWP NV +C ++
Sbjct: 180 ESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 42.7 bits (96), Expect = 5e-04
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 522 RFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-ECGD 635
RF C + CP +L+Y+ N E CDW HNV ECG+
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGE 79
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 153 NFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPH- 329
N+++ +A C + D L A + R C GR +CPP+L+FN ++ CD+P
Sbjct: 300 NYKASEALTPCTNM--DNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPET 357
Query: 330 NVEC 341
+++C
Sbjct: 358 SLKC 361
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 159 ESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV- 335
E + + C + DG + F C G P+ + CP L+F+ N+ CD+ NV
Sbjct: 231 EKSEKPQNCGEV--DGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVD 288
Query: 336 EC 341
EC
Sbjct: 289 EC 290
Score = 36.3 bits (80), Expect = 0.040
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 489 DGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
DG + F C + P+ + CP L+++ N+ CD+ NV EC
Sbjct: 243 DGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 34.7 bits (76), Expect = 0.12
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 180 ICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-EC 341
+C + DG+ + + + C G P L C L+++P+N++C W + EC
Sbjct: 118 VCESL-KDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDEC 171
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 489 DGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPH-NVEC 629
D L A + R C + CPP+L++N N+ CD+P +++C
Sbjct: 314 DNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +3
Query: 165 GKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV 335
G+ C+ GS + +C FY+C GR V + CP +FNP CDWP V
Sbjct: 1239 GQTNGECSEHGS--FIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 471 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 623
C+E S + +C FY+C V + CP ++NP CDWP V
Sbjct: 1245 CSEHGS--FIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 33.5 bits (73), Expect = 0.28
Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 1/127 (0%)
Frame = +3
Query: 234 RFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRTIPXXXXXXXXXXXXXXXXXX 413
+F C G KCP +L+FN + C + D T
Sbjct: 114 QFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEVKQDTTTAPQVYEDGEEGYGEASGEI 173
Query: 414 XXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTR-FYKCFDSHPVALICPPNLLYNP 590
+ P C + DG + C FY C ++ CPP ++N
Sbjct: 174 AGDYERQPSNEQPDSIDFDCNGLE-DGNYA--DGCNDVFYSCSNNMVFQRYCPPGTVFNI 230
Query: 591 NNEQCDW 611
N + CD+
Sbjct: 231 NQQSCDF 237
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 237 FYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV 335
FY CA G+ VA CP NL+FNP +CD+ NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 222 EHCTR-FYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVE 338
E CT+ F+ C +GR A CP +L+FN + CD+ N E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 38.3 bits (85), Expect = 0.010
Identities = 39/188 (20%), Positives = 62/188 (32%), Gaps = 10/188 (5%)
Frame = +3
Query: 93 VALSNASVIKENTNKATKGVNFESGKATEICARI--GSDGILVAHEHCTRFY-KCAEGRP 263
++ N + T V S + C R+ G+ G+ C +Y C
Sbjct: 758 ISYQNYGYSQSTTKAYNPSVTTPSPQHAAFCERLENGNYGL-----DCEDYYISCNNFET 812
Query: 264 VALKCPPNLLFNPSNEQCDWPHNVE-CGD-----RTIPXXXXXXXXXXXXXXXXXXXXXX 425
+CP L ++ N +CD+ +VE C + T P
Sbjct: 813 TINRCPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTPAAEQPGTTKYTTYNYPNIDYTS 872
Query: 426 XXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFY-KCFDSHPVALICPPNLLYNPNNEQ 602
LA DG+ A +C++ Y +C + C P L YN N
Sbjct: 873 TTPGPVDTTPLAKAFSCSGRPDGIY-ALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGM 931
Query: 603 CDWPHNVE 626
C + H V+
Sbjct: 932 CAYKHTVD 939
Score = 37.9 bits (84), Expect = 0.013
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 525 FYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 623
FY C + VA CP NL++NP +CD+ NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 510 EHCTR-FYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVE 626
E CT+ F+ C D A CP +L++N CD+ N E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 32.3 bits (70), Expect = 0.65
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 ALSNASVIKENTNKATKGVNFESGKATEICARIGSDGILVAHEHCTR-FYKCAEGRPVAL 272
A + AS ++ N FE+G C ++ D + C+ F++C+ G+
Sbjct: 174 AAAYASPTYDSDNYIVTTKEFENGHNGLDC-KVTGDMHFTDNVKCSPYFWQCSNGKLFRK 232
Query: 273 KCPPNLLFNPSNEQCDWPHNVE 338
CP L++ CD+P +V+
Sbjct: 233 TCPEKLIYVLDQNLCDFPESVK 254
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 237 FYKCAEGRPVALKCPPNLLFNPSNEQCDWPHN 332
+Y+CA G KCP ++ P ++CD+ N
Sbjct: 131 YYQCANGISYMRKCPYQQVYVPILKRCDYHTN 162
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 468 ICAEKDSDGVLVAHEHCTRFY-KCFDSHPVALICPPNLLYNPNNEQCDWPHNVE 626
+CA++D DG C ++ KC++ CP L Y+ ++CD NVE
Sbjct: 688 MCAKRD-DGNYGFD--CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE 738
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 198 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECGDRTIP 359
+DGI T F C+ G + CP +L+FNP+ CDWP +V EC P
Sbjct: 251 ADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 39.5 bits (88), Expect = 0.004
Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 2/145 (1%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECGDRTIPXXXXXX 377
DG + + F C GR + + CP L F+ S +CD+ NV EC + +
Sbjct: 312 DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGEAS 371
Query: 378 XXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA 557
C D+ L A R C + H
Sbjct: 372 GEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNG--LHAIGCSPRVLSCQNGHVDI 429
Query: 558 LICPPNLLYNPNNEQCDWPH-NVEC 629
CP +L++N + CD+P +++C
Sbjct: 430 FECPSSLVFNDQSLICDYPQTSLKC 454
Score = 36.7 bits (81), Expect = 0.030
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV 335
DG+ E +F C+ G + CP +L++N CDW HNV
Sbjct: 29 DGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 36.3 bits (80), Expect = 0.040
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 465 EICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
E E +DG+ T F C + CP +L++NP CDWP +V EC
Sbjct: 244 EPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 33.5 bits (73), Expect = 0.28
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 489 DGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 623
DG+ E +F C + CP +L+YN CDW HNV
Sbjct: 29 DGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 483 DSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
+ DG + + F C + + + CP L ++ + +CD+ NV EC
Sbjct: 310 EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 192 IGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPH-NVEC 341
+G D L A R C G +CP +L+FN + CD+P +++C
Sbjct: 404 VGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 123 ENTNKATKGVNFESGKAT--EICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLF 296
E + +A+ G SG+ T +C + DG + T ++ C L CP L +
Sbjct: 117 EGSGEAS-GEGSGSGEETVENVCENL-EDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFY 174
Query: 297 NPSNEQCDWPHNVE 338
+ +++C W VE
Sbjct: 175 DADSQKCIWKSLVE 188
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 468 ICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVE 626
+C E DG + T ++ C + L CP L Y+ ++++C W VE
Sbjct: 137 VC-ENLEDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 198 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECGDRTIP 359
+DGI T F C+ G + CP +L+FNP+ CDWP +V EC P
Sbjct: 251 ADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 39.5 bits (88), Expect = 0.004
Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 2/145 (1%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECGDRTIPXXXXXX 377
DG + + F C GR + + CP L F+ S +CD+ NV EC + +
Sbjct: 312 DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGEAS 371
Query: 378 XXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA 557
C D+ L A R C + H
Sbjct: 372 GEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNG--LHAIGCSPRVLSCQNGHVDI 429
Query: 558 LICPPNLLYNPNNEQCDWPH-NVEC 629
CP +L++N + CD+P +++C
Sbjct: 430 FECPSSLVFNDQSLICDYPQTSLKC 454
Score = 36.7 bits (81), Expect = 0.030
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV 335
DG+ E +F C+ G + CP +L++N CDW HNV
Sbjct: 29 DGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 36.3 bits (80), Expect = 0.040
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 465 EICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
E E +DG+ T F C + CP +L++NP CDWP +V EC
Sbjct: 244 EPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 33.5 bits (73), Expect = 0.28
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 489 DGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 623
DG+ E +F C + CP +L+YN CDW HNV
Sbjct: 29 DGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 483 DSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
+ DG + + F C + + + CP L ++ + +CD+ NV EC
Sbjct: 310 EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 192 IGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPH-NVEC 341
+G D L A R C G +CP +L+FN + CD+P +++C
Sbjct: 404 VGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 123 ENTNKATKGVNFESGKAT--EICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLF 296
E + +A+ G SG+ T +C + DG + T ++ C L CP L +
Sbjct: 117 EGSGEAS-GEGSGSGEETVENVCENL-EDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFY 174
Query: 297 NPSNEQCDWPHNVE 338
+ +++C W VE
Sbjct: 175 DADSQKCIWKSLVE 188
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 468 ICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVE 626
+C E DG + T ++ C + L CP L Y+ ++++C W VE
Sbjct: 137 VC-ENLEDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 341
DG C +F +C G +CP L F+ CD P +C
Sbjct: 569 DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
Score = 33.1 bits (72), Expect = 0.37
Identities = 31/167 (18%), Positives = 51/167 (30%)
Frame = +3
Query: 129 TNKATKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSN 308
T T+ + T +C+ SDG +C F C + ++ CP L ++ S
Sbjct: 463 TTTTTRAATTTTASNTNVCSG-KSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASL 521
Query: 309 EQCDWPHNVECGDRTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDS 488
+ C C T P+ T +
Sbjct: 522 KYCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRA------------PTTTTP-AFKCTK 568
Query: 489 DGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 629
DG C +F +C + CP L ++ + CD P +C
Sbjct: 569 DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECG 344
DG+ +F C+ G + CP +L+++P C++ +NV +CG
Sbjct: 66 DGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 32.3 bits (70), Expect = 0.65
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 471 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-ECG 632
C+ K+ DG+ +F C + CP +L+Y+P C++ +NV +CG
Sbjct: 61 CSTKE-DGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECG 344
DG+ +F C+ G + CP +L+++P C++ +NV +CG
Sbjct: 66 DGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 32.3 bits (70), Expect = 0.65
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 471 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-ECG 632
C+ K+ DG+ +F C + CP +L+Y+P C++ +NV +CG
Sbjct: 61 CSTKE-DGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 198 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-EC 341
+DG E + C+ G + ++CP L F+ + CD+ NV EC
Sbjct: 218 ADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
S T+ C K +DG E + C + + + + CP L ++ CD+ NV EC
Sbjct: 208 SAVTKSCVGK-ADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 201 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-ECG 344
DG+ +F C+ G + CP +L+++P C++ +NV +CG
Sbjct: 66 DGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 32.3 bits (70), Expect = 0.65
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 471 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-ECG 632
C+ K+ DG+ +F C + CP +L+Y+P C++ +NV +CG
Sbjct: 61 CSTKE-DGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 198 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNV-EC 341
+DG E + C+ G + ++CP L F+ + CD+ NV EC
Sbjct: 218 ADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV-EC 629
S T+ C K +DG E + C + + + + CP L ++ CD+ NV EC
Sbjct: 208 SAVTKSCVGK-ADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical
protein ZC132.4 protein.
Length = 831
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +3
Query: 87 YAVALSNASVIKENTNKATKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPV 266
+ + LS+ + N+ T GV + A I ++ V H + YKCA G
Sbjct: 358 WKLQLSDDKITATIANEVTTGVTMTLKDNVTMSAWISNEKCYVKASHASGCYKCATGSSA 417
Query: 267 ALKC 278
L+C
Sbjct: 418 TLQC 421
>L10990-7|AAB59174.1| 378|Caenorhabditis elegans Hypothetical
protein C30A5.4 protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 111 SVIKENTNKATKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGR 260
SV + T+ G F + ++C R+G + I+ AH+ C Y GR
Sbjct: 268 SVFEWKTSSRGSGFTFGTNVIDDVCKRLGVELIIRAHQMCFDGYWVLSGR 317
>AC006679-14|AAK84462.2| 421|Caenorhabditis elegans Hypothetical
protein R13A5.11 protein.
Length = 421
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 111 SVIKENTNKATKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGR 260
SV + + G F + ++C R+G + I+ AH+ C Y GR
Sbjct: 311 SVFEWKASSRGSGFTFGTNVIDDVCKRLGVELIIRAHQMCFDGYWVLSGR 360
>U97008-10|AAB52315.2| 494|Caenorhabditis elegans Cytochrome p450
family protein 35A2 protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = +1
Query: 439 DTPTPAWLLKYVLKKIQTVFWSPMSTAPDFTNVSIV-----IQ*PSFVLQICCIILITSS 603
D P W LK K WS TA +F + I+ +V+ + T +
Sbjct: 217 DMTAPVWFLKTFFKHRYDKIWSAQETAKNFAAAEAIKRVESIKSGKYVIDENNLQDYTDA 276
Query: 604 ATGLIM*SVETESFQ-KTTRMLIVKVTMAVEETETKTI 714
I E++ F +T + +I+ + M +ET T T+
Sbjct: 277 FLLKIQKEGESKDFNIETLKTMIIDLWMTGQETTTTTL 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,462,217
Number of Sequences: 27780
Number of extensions: 410217
Number of successful extensions: 1136
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3036427278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -