Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18f18r
(827 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389... 70 3e-12
03_06_0226 + 32495088-32495237,32496189-32496351,32496438-324965... 67 2e-11
03_05_0497 + 24932336-24932485,24934037-24934199,24934306-249344... 63 2e-10
04_04_0712 + 27476319-27476569,27477150-27477402,27477535-274779... 62 7e-10
05_01_0411 + 3243025-3243092,3243348-3243496,3243740-3243872,324... 42 8e-04
05_07_0111 - 27752339-27752777,27753356-27753840,27753956-27754120 41 0.001
05_01_0207 + 1493224-1493385,1493475-1493839,1494313-1494390,149... 40 0.002
12_02_1140 + 26411424-26411998,26412491-26412761,26412848-26413405 37 0.017
08_01_0408 - 3616655-3617108,3617190-3617596,3618120-3618287 37 0.017
02_02_0601 + 12021766-12022197 35 0.069
01_06_1526 + 38003071-38003247,38003338-38003690,38004489-38004987 34 0.12
02_01_0225 - 1469295-1469733,1472352-1472767,1473603-1473658,147... 33 0.21
08_02_0469 - 17531189-17531678,17531773-17531798,17533511-17533669 33 0.37
01_01_0976 + 7711634-7711801,7712741-7713183,7715813-7716251 32 0.64
05_04_0387 - 20834510-20834978,20836866-20837329,20837458-20837634 31 1.1
04_03_1024 - 21801411-21801725,21801881-21801989,21802200-218023... 29 4.5
07_03_0576 + 19638725-19638779,19638988-19639144,19639871-196401... 28 7.9
06_03_1047 - 27133869-27134345,27134444-27134701,27134841-271350... 28 7.9
03_06_0653 - 35305279-35306163 28 7.9
>02_05_0183 +
26537676-26537752,26538481-26538649,26538736-26538910,
26539008-26539137,26540425-26540558,26540629-26540771,
26540894-26541092,26541183-26541514
Length = 452
Score = 69.7 bits (163), Expect = 3e-12
Identities = 43/111 (38%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETILPPRPAFVMPT 648
P EGMP + F KG +V+F+V FPE Q + +E ILPPRP +
Sbjct: 342 PGQHKAINDEGMPQHGRPFMKGRLFVEFNVEFPEPGALTPGQCRSLEKILPPRPRNQLSD 401
Query: 647 GE--DVEEVNLMDYFTPSESSR----GREEAYASDDEEHMHAGPGVQCAHQ 513
E EE + D E R R+EAY DD+E AGP VQCA Q
Sbjct: 402 MELDQCEETTMHDVNIEEEMRRRQQHRRQEAYDEDDDEDAGAGPRVQCAQQ 452
>03_06_0226 +
32495088-32495237,32496189-32496351,32496438-32496576,
32496669-32496945,32497051-32497249,32497379-32497704
Length = 417
Score = 66.9 bits (156), Expect = 2e-11
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETILPPRPA--FVM 654
P EGMP+Y+ F KG Y+ F V FP++ N +Q K +ET+LPPRP +
Sbjct: 309 PDSFKAVNDEGMPMYQRPFMKGKLYIHFSVEFPDS--LNPDQCKALETVLPPRPVSQYTD 366
Query: 653 PTGEDVEEVNLMDYFTPSESSRGREEAY--ASDDEEHMHAGPG--VQCAHQ 513
++ EE D E R +++ A D++E MH G VQCA Q
Sbjct: 367 MELDECEETMPYDVNIEEEMRRRQQQQQQEAYDEDEDMHGGGAQRVQCAQQ 417
>03_05_0497 +
24932336-24932485,24934037-24934199,24934306-24934447,
24934528-24934804,24934887-24935085,24935169-24935491
Length = 417
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETILPPRPAFVMPT 648
P EGMP+Y+ F KG Y+ F V FP++ EQ K +E +LPP+PA +
Sbjct: 310 PDQFKAINDEGMPMYQRPFMKGKLYIHFTVEFPDS--LAPEQCKALEAVLPPKPASQLTE 367
Query: 647 GE--DVEEVNLMDYFTPSESSRGREEA--YASDDEEHMHAG-PGVQCAHQ 513
E + EE + D E R + +A A D+++ M G VQCA Q
Sbjct: 368 MEIDECEETTMHDVNNIEEEMRRKAQAAQEAYDEDDEMPGGAQRVQCAQQ 417
>04_04_0712 +
27476319-27476569,27477150-27477402,27477535-27477914,
27479738-27479864,27479945-27480110,27480221-27480359,
27481854-27481987,27482087-27482229,27482367-27482565,
27482688-27483010
Length = 704
Score = 61.7 bits (143), Expect = 7e-10
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETILPPRPAFVMPT 648
P EGMP + F KG +V+F+V FPE+ + +Q + +E ILPP+P +
Sbjct: 597 PGQHKAINDEGMPHHGRPFMKGRLFVEFNVEFPESGVLSRDQCRALEMILPPKPGHQLSD 656
Query: 647 G--EDVEEVNLMDYFTPSESSR----GREEAYASDDEEHMHAGPGVQCAHQ 513
+ EE + D E R ++EAY D+EE P VQCA Q
Sbjct: 657 MDLDQCEETTMHDVNIEEEMRRKQYQRKQEAYDEDEEED---APRVQCAQQ 704
>05_01_0411 +
3243025-3243092,3243348-3243496,3243740-3243872,
3244740-3244860,3245065-3245181,3245303-3245389,
3245941-3246000,3246097-3246174,3246587-3246658,
3246767-3246925
Length = 347
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/50 (38%), Positives = 35/50 (70%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETIL 678
P + +KGEGMP+Y++ +KG+ YV F+V+FP+ ++Q ++++IL
Sbjct: 300 PKEVRKFKGEGMPLYQS-NKKGDLYVTFEVLFPKT--LTDDQKSKLKSIL 346
>05_07_0111 - 27752339-27752777,27753356-27753840,27753956-27754120
Length = 362
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEE 705
P V +GEGMPI K+ +KGN VKFD+ FP A+++
Sbjct: 313 PGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQK 353
>05_01_0207 +
1493224-1493385,1493475-1493839,1494313-1494390,
1496134-1496157,1496213-1496654
Length = 356
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETILP 675
P V KGEGMPI K +KG+ ++F + FP N +Q I+ +LP
Sbjct: 306 PTSEEVVKGEGMPITKEPSKKGDLKIRFQIKFPTN--LTSDQKSGIQQLLP 354
>12_02_1140 + 26411424-26411998,26412491-26412761,26412848-26413405
Length = 467
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFP 729
P L GEGMP++ F KG YV F V FP
Sbjct: 348 PGQLKAIDGEGMPVHGMPFAKGTLYVAFRVAFP 380
>08_01_0408 - 3616655-3617108,3617190-3617596,3618120-3618287
Length = 342
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -1
Query: 800 EGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQ 702
EGMPI K +GN +KFD+VFP+ +++ Q
Sbjct: 297 EGMPIVKENGRRGNLRIKFDIVFPKRLSSDQRQ 329
>02_02_0601 + 12021766-12022197
Length = 143
Score = 35.1 bits (77), Expect = 0.069
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETIL 678
P V EGMPI K+ +KGN +KF++ FP EQ +I+ +L
Sbjct: 94 PGYEEVVLREGMPIPKDPSKKGNLRIKFNIKFPSR--LTSEQKSEIKRLL 141
>01_06_1526 + 38003071-38003247,38003338-38003690,38004489-38004987
Length = 342
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETIL 678
P + KGEGMPI +G+ VKF++ FP+ +EQ + IL
Sbjct: 289 PGYEKIIKGEGMPIADQKGARGDLRVKFEIAFPKQ--LTDEQRDGLAQIL 336
>02_01_0225 -
1469295-1469733,1472352-1472767,1473603-1473658,
1473827-1473995
Length = 359
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 812 VYKGEGMPIYKNLFEKGNFYVKFDVVFP 729
V EG PI K +KGN +KFDV FP
Sbjct: 315 VLANEGWPIRKEPGKKGNLKIKFDVTFP 342
>08_02_0469 - 17531189-17531678,17531773-17531798,17533511-17533669
Length = 224
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -1
Query: 812 VYKGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETIL 678
V EGMPI + G+ ++FDV FPE Q QI+ IL
Sbjct: 178 VVPSEGMPIAREPGRHGSLRIRFDVAFPER--LTRRQRAQIKRIL 220
>01_01_0976 + 7711634-7711801,7712741-7713183,7715813-7716251
Length = 349
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIYKNLFEKGNFYVKFDVVFP 729
P + V GEGMP K +KG+ +KF++ FP
Sbjct: 300 PDYVEVVPGEGMPNPKGPNKKGDLKIKFNIRFP 332
>05_04_0387 - 20834510-20834978,20836866-20837329,20837458-20837634
Length = 369
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -1
Query: 827 PXMLNVYKGEGMPIY-------KNLFEKGNFYVKFDVVFPEN 723
P V GEGMP+ K +G+ VKFDVVFP+N
Sbjct: 311 PGYEKVVAGEGMPVVAAGGGGEKAAAARGDLRVKFDVVFPKN 352
>04_03_1024 -
21801411-21801725,21801881-21801989,21802200-21802375,
21802489-21802571,21803228-21803279
Length = 244
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 644 EDVEEVNLMDYFTPSESSRGREEAYASDDEEHMHAGPG 531
EDV++ +L+D + E+ + SDDE+ ++ G G
Sbjct: 12 EDVDDDDLLDDNEDDDDDYSFEDDFESDDEQDLYVGDG 49
>07_03_0576 +
19638725-19638779,19638988-19639144,19639871-19640113,
19640267-19640801,19640897-19641054,19641194-19641626
Length = 526
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 812 VYKGEGMPIYKNLFEKGNFYVKFDVVFPE 726
V K EG PI + L KGN + FDV FP+
Sbjct: 484 VIKDEGWPIGEGL--KGNLRIIFDVSFPK 510
>06_03_1047 -
27133869-27134345,27134444-27134701,27134841-27135041,
27135242-27135584,27135674-27135732,27136256-27136581,
27136753-27136849,27137072-27137182,27137691-27138305,
27139578-27139880
Length = 929
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 671 RPAFVMPTGEDVEEVNLMDYFTPSESSRGREEAYASDDEEHMHAG-PGVQCA 519
RPA G+++E+V L+D + E G A A+ +EE H G+ C+
Sbjct: 14 RPAAAGGGGDEMEDVRLLDSY--DEEMGGGAAAAAAGEEEEAHVRVTGMTCS 63
>03_06_0653 - 35305279-35306163
Length = 294
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -1
Query: 737 VFPENHF--ANEEQLKQIETILPPRP--AFVMPTGEDVEEVNLMDYFTPSESSRGREEAY 570
+FP F E +++++ +P AF E+ EE + DY + + SS EEA
Sbjct: 126 LFPGEKFYLLPERTIERLQRQIPESSVGAFDNADEEEEEEEDTQDYSSGAASSSSEEEAA 185
Query: 569 ASDDEEHMHAGPGVQCAHQ 513
DD+ A CA +
Sbjct: 186 CDDDDGDECAARRWCCARE 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,775,804
Number of Sequences: 37544
Number of extensions: 283587
Number of successful extensions: 621
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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