Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18f16r
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075459-1|AAL68272.1|  417|Drosophila melanogaster RE15159p pro...    59   6e-09
AE014134-2956|AAF53688.2|  417|Drosophila melanogaster CG31751-P...    59   6e-09
AE014134-2955|AAF53686.2|  417|Drosophila melanogaster CG31751-P...    59   6e-09

>AY075459-1|AAL68272.1|  417|Drosophila melanogaster RE15159p
           protein.
          Length = 417

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
 Frame = -3

Query: 813 LAGYTVTRRLPDEEYRLLKTLISARLVQSLILGAYTLEQDPKNTYVTSTEKANGWELLRK 634
           L+GYT    + + E  LLK  ++AR VQSL++G YT    P N Y+  T++  GW+LL+K
Sbjct: 333 LSGYTSLNPIENSELALLKYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQE-KGWKLLQK 391

Query: 633 IRKTKPTENGDPTD--WKAIANEFLTRS 556
           + +    E+ D  D  W +  +++LT+S
Sbjct: 392 LWR----ESFDDIDELWASTGHQYLTQS 415


>AE014134-2956|AAF53688.2|  417|Drosophila melanogaster CG31751-PB,
           isoform B protein.
          Length = 417

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
 Frame = -3

Query: 813 LAGYTVTRRLPDEEYRLLKTLISARLVQSLILGAYTLEQDPKNTYVTSTEKANGWELLRK 634
           L+GYT    + + E  LLK  ++AR VQSL++G YT    P N Y+  T++  GW+LL+K
Sbjct: 333 LSGYTSLNPIENSELALLKYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQE-KGWKLLQK 391

Query: 633 IRKTKPTENGDPTD--WKAIANEFLTRS 556
           + +    E+ D  D  W +  +++LT+S
Sbjct: 392 LWR----ESFDDIDELWASTGHQYLTQS 415


>AE014134-2955|AAF53686.2|  417|Drosophila melanogaster CG31751-PA,
           isoform A protein.
          Length = 417

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
 Frame = -3

Query: 813 LAGYTVTRRLPDEEYRLLKTLISARLVQSLILGAYTLEQDPKNTYVTSTEKANGWELLRK 634
           L+GYT    + + E  LLK  ++AR VQSL++G YT    P N Y+  T++  GW+LL+K
Sbjct: 333 LSGYTSLNPIENSELALLKYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQE-KGWKLLQK 391

Query: 633 IRKTKPTENGDPTD--WKAIANEFLTRS 556
           + +    E+ D  D  W +  +++LT+S
Sbjct: 392 LWR----ESFDDIDELWASTGHQYLTQS 415


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,591,311
Number of Sequences: 53049
Number of extensions: 577785
Number of successful extensions: 1376
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)