Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18f12f
(464 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071747-1|AAL49369.1| 58|Drosophila melanogaster RH56317p pro... 61 6e-10
AE014296-3726|AAN12206.1| 58|Drosophila melanogaster CG33169-P... 61 6e-10
AE014296-3725|AAO41287.1| 234|Drosophila melanogaster CG33169-P... 46 2e-05
L14849-1|AAA28748.1| 548|Drosophila melanogaster tyrosine phosp... 28 7.1
L11253-1|AAA75339.1| 548|Drosophila melanogaster protein ( D.me... 28 7.1
L11250-1|AAA75348.1| 548|Drosophila melanogaster protein ( D.me... 28 7.1
AE014296-244|AAN11476.1| 431|Drosophila melanogaster CG9181-PD,... 28 7.1
AE014296-243|AAF47487.1| 548|Drosophila melanogaster CG9181-PA,... 28 7.1
Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subuni... 27 9.4
BT030434-1|ABO52854.1| 492|Drosophila melanogaster IP18315p pro... 27 9.4
AY121632-1|AAM51959.1| 542|Drosophila melanogaster GM01935p pro... 27 9.4
AE014296-247|AAN11477.1| 469|Drosophila melanogaster CG32320-PA... 27 9.4
AE013599-3724|AAF47096.1| 314|Drosophila melanogaster CG13562-P... 27 9.4
AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-P... 27 9.4
>AY071747-1|AAL49369.1| 58|Drosophila melanogaster RH56317p
protein.
Length = 58
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/57 (45%), Positives = 43/57 (75%)
Frame = +2
Query: 71 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 241
MR+LKG VKET +QK+ERK + + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 1 MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57
>AE014296-3726|AAN12206.1| 58|Drosophila melanogaster CG33169-PA,
isoform A protein.
Length = 58
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/57 (45%), Positives = 43/57 (75%)
Frame = +2
Query: 71 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 241
MR+LKG VKET +QK+ERK + + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 1 MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57
>AE014296-3725|AAO41287.1| 234|Drosophila melanogaster CG33169-PB,
isoform B protein.
Length = 234
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +2
Query: 71 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVY 211
MR+LKG VKET +QK+ERK + + + +I T+VLP + V+ + + V+
Sbjct: 1 MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLFVH 47
>L14849-1|AAA28748.1| 548|Drosophila melanogaster tyrosine
phosphatase protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 80 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 223
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>L11253-1|AAA75339.1| 548|Drosophila melanogaster protein (
D.melanogaster proteintyrosine phosphatase mRNA,
complete cds. ).
Length = 548
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 80 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 223
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>L11250-1|AAA75348.1| 548|Drosophila melanogaster protein (
D.melanogaster proteintyrosine phosphatase gene, exons
2-6 and complete cds.).
Length = 548
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 80 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 223
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>AE014296-244|AAN11476.1| 431|Drosophila melanogaster CG9181-PD,
isoform D protein.
Length = 431
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 80 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 223
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 382 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 429
>AE014296-243|AAF47487.1| 548|Drosophila melanogaster CG9181-PA,
isoform A protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 80 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 223
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subunit of
RNA polymeraseI (A) protein.
Length = 1644
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 67 EDEEAEGSRQRDS*AEKGKKTRIREN--AKTNTYDCVTNCRCNIFINLCVR 213
ED+E +G D+ + R+ N K TYD + C + +NL VR
Sbjct: 1412 EDDEEKGQDGNDNDGDDKAVERLLSNDMVKAYTYDKENHLWCQVKLNLSVR 1462
>BT030434-1|ABO52854.1| 492|Drosophila melanogaster IP18315p
protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 113 KRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVY 217
+++ K+EF R ++H + L ++IF+L+ +Y
Sbjct: 106 EQDVKEEFEAQRHKLHFVYLWLNLIIFILLLTIIY 140
>AY121632-1|AAM51959.1| 542|Drosophila melanogaster GM01935p
protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 67 EDEEAEGSRQRDS*AEKGKKTRIREN--AKTNTYDCVTNCRCNIFINLCVR 213
ED+E +G D+ + R+ N K TYD + C + +NL VR
Sbjct: 310 EDDEEKGQDGNDNDGDDKAVERLLSNDMVKAYTYDKENHLWCQVKLNLSVR 360
>AE014296-247|AAN11477.1| 469|Drosophila melanogaster CG32320-PA
protein.
Length = 469
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 113 KRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVY 217
+++ K+EF R ++H + L ++IF+L+ +Y
Sbjct: 180 EQDVKEEFEAQRHKLHFVYLWLNLIIFILLLTIIY 214
>AE013599-3724|AAF47096.1| 314|Drosophila melanogaster CG13562-PA
protein.
Length = 314
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 174 GNTIVCICFRIFANSCFLSLFCLAVSLTGPFSFLI 70
G ++CI + + A+S ++ L+ +LTG S +I
Sbjct: 95 GGCVICIDYSVVASSSYMRLYTNFDTLTGAISSII 129
>AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-PA
protein.
Length = 1642
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 67 EDEEAEGSRQRDS*AEKGKKTRIREN--AKTNTYDCVTNCRCNIFINLCVR 213
ED+E +G D+ + R+ N K TYD + C + +NL VR
Sbjct: 1410 EDDEEKGQDGNDNDGDDKAVERLLSNDMVKAYTYDKENHLWCQVKLNLSVR 1460
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,175,302
Number of Sequences: 53049
Number of extensions: 377271
Number of successful extensions: 1381
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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