Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18f07r
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069171-1|AAL39316.1|  544|Drosophila melanogaster GH21176p pro...   126   3e-29
AY058776-1|AAL14005.1|  544|Drosophila melanogaster SD05904p pro...   126   3e-29
AE013599-2547|AAM68486.1|  544|Drosophila melanogaster CG6406-PB...   126   3e-29
AE013599-2546|AAF57803.1|  544|Drosophila melanogaster CG6406-PA...   126   3e-29
M82887-1|AAB59218.1|  640|Drosophila melanogaster dual bar prote...    31   1.6  
M82884-1|AAA28383.2|  645|Drosophila melanogaster dual bar prote...    31   1.6  
BT022144-1|AAY51539.1|  645|Drosophila melanogaster IP01479p pro...    31   1.6  
AY058351-1|AAL13580.1|  798|Drosophila melanogaster GH12381p pro...    31   1.6  
AE014298-2565|AAF48725.1|  645|Drosophila melanogaster CG5488-PA...    31   1.6  
AE014297-3929|AAF56578.1|  798|Drosophila melanogaster CG12290-P...    31   1.6  
AY075488-1|AAL68298.1|  308|Drosophila melanogaster RE41571p pro...    30   4.9  
AE014298-2819|AAF48936.1|  308|Drosophila melanogaster CG7876-PA...    30   4.9  
AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA...    30   4.9  
AE014298-1830|AAN09644.1|  582|Drosophila melanogaster CG32644-P...    29   6.5  
AE014296-2056|AAF49992.1|  401|Drosophila melanogaster CG5897-PA...    29   6.5  
AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p pro...    29   8.6  
AY061159-1|AAL28707.1|  129|Drosophila melanogaster LD12764p pro...    29   8.6  
AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB...    29   8.6  

>AY069171-1|AAL39316.1|  544|Drosophila melanogaster GH21176p
           protein.
          Length = 544

 Score =  126 bits (305), Expect = 3e-29
 Identities = 65/101 (64%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = -2

Query: 881 DVDQRAQYELFPEVMIVTSAVINSLKNNASGQPFDGPMGISVALSPATTTVT--MSKSMI 708
           D+  RA YE++ EV++VTSAV NSL  N SGQP DGPMG+SVAL+P+TTTVT  +SKSMI
Sbjct: 274 DIHNRAIYEMYSEVILVTSAVRNSLHANPSGQPNDGPMGLSVALTPSTTTVTTSVSKSMI 333

Query: 707 TNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEGESET 585
           TNASFRTKKLPDDIPIQ    T  ++   L S+TEE E  T
Sbjct: 334 TNASFRTKKLPDDIPIQVQDLTIQQAPQQLASVTEETEPGT 374


>AY058776-1|AAL14005.1|  544|Drosophila melanogaster SD05904p
           protein.
          Length = 544

 Score =  126 bits (305), Expect = 3e-29
 Identities = 65/101 (64%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = -2

Query: 881 DVDQRAQYELFPEVMIVTSAVINSLKNNASGQPFDGPMGISVALSPATTTVT--MSKSMI 708
           D+  RA YE++ EV++VTSAV NSL  N SGQP DGPMG+SVAL+P+TTTVT  +SKSMI
Sbjct: 274 DIHNRAIYEMYSEVILVTSAVRNSLHANPSGQPNDGPMGLSVALTPSTTTVTTSVSKSMI 333

Query: 707 TNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEGESET 585
           TNASFRTKKLPDDIPIQ    T  ++   L S+TEE E  T
Sbjct: 334 TNASFRTKKLPDDIPIQVQDLTIQQAPQQLASVTEETEPGT 374


>AE013599-2547|AAM68486.1|  544|Drosophila melanogaster CG6406-PB,
           isoform B protein.
          Length = 544

 Score =  126 bits (305), Expect = 3e-29
 Identities = 65/101 (64%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = -2

Query: 881 DVDQRAQYELFPEVMIVTSAVINSLKNNASGQPFDGPMGISVALSPATTTVT--MSKSMI 708
           D+  RA YE++ EV++VTSAV NSL  N SGQP DGPMG+SVAL+P+TTTVT  +SKSMI
Sbjct: 274 DIHNRAIYEMYSEVILVTSAVRNSLHANPSGQPNDGPMGLSVALTPSTTTVTTSVSKSMI 333

Query: 707 TNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEGESET 585
           TNASFRTKKLPDDIPIQ    T  ++   L S+TEE E  T
Sbjct: 334 TNASFRTKKLPDDIPIQVQDLTIQQAPQQLASVTEETEPGT 374


>AE013599-2546|AAF57803.1|  544|Drosophila melanogaster CG6406-PA,
           isoform A protein.
          Length = 544

 Score =  126 bits (305), Expect = 3e-29
 Identities = 65/101 (64%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = -2

Query: 881 DVDQRAQYELFPEVMIVTSAVINSLKNNASGQPFDGPMGISVALSPATTTVT--MSKSMI 708
           D+  RA YE++ EV++VTSAV NSL  N SGQP DGPMG+SVAL+P+TTTVT  +SKSMI
Sbjct: 274 DIHNRAIYEMYSEVILVTSAVRNSLHANPSGQPNDGPMGLSVALTPSTTTVTTSVSKSMI 333

Query: 707 TNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEGESET 585
           TNASFRTKKLPDDIPIQ    T  ++   L S+TEE E  T
Sbjct: 334 TNASFRTKKLPDDIPIQVQDLTIQQAPQQLASVTEETEPGT 374


>M82887-1|AAB59218.1|  640|Drosophila melanogaster dual bar protein
           protein.
          Length = 640

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 458 SSKGIWNSLSGGSGDMVDGLQ-KTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHIT 285
           +  G  N L GG G  + G Q  T D S   +   KD+    +  + SS N D+ SH++
Sbjct: 310 NGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLS 368


>M82884-1|AAA28383.2|  645|Drosophila melanogaster dual bar protein
           protein.
          Length = 645

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 458 SSKGIWNSLSGGSGDMVDGLQ-KTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHIT 285
           +  G  N L GG G  + G Q  T D S   +   KD+    +  + SS N D+ SH++
Sbjct: 315 NGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLS 373


>BT022144-1|AAY51539.1|  645|Drosophila melanogaster IP01479p
           protein.
          Length = 645

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 458 SSKGIWNSLSGGSGDMVDGLQ-KTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHIT 285
           +  G  N L GG G  + G Q  T D S   +   KD+    +  + SS N D+ SH++
Sbjct: 315 NGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLS 373


>AY058351-1|AAL13580.1|  798|Drosophila melanogaster GH12381p
           protein.
          Length = 798

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = -2

Query: 416 DMVDGLQKTADSSVETNGTSKDEKISMTSVHNSSE----NSDTRSHITPDSLDIDTTP 255
           D   GLQ+   SSV+TNGT+           NSS+    +S++  ++TP S  +   P
Sbjct: 636 DSSSGLQRNCSSSVKTNGTAGPAASGAQLQRNSSKLSQYSSNSCKYLTPQSSLVSQVP 693


>AE014298-2565|AAF48725.1|  645|Drosophila melanogaster CG5488-PA
           protein.
          Length = 645

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 458 SSKGIWNSLSGGSGDMVDGLQ-KTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHIT 285
           +  G  N L GG G  + G Q  T D S   +   KD+    +  + SS N D+ SH++
Sbjct: 315 NGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLS 373


>AE014297-3929|AAF56578.1|  798|Drosophila melanogaster CG12290-PA
           protein.
          Length = 798

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = -2

Query: 416 DMVDGLQKTADSSVETNGTSKDEKISMTSVHNSSE----NSDTRSHITPDSLDIDTTP 255
           D   GLQ+   SSV+TNGT+           NSS+    +S++  ++TP S  +   P
Sbjct: 636 DSSSGLQRNCSSSVKTNGTAGPAASGAQLQRNSSKLSQYSSNSCKYLTPQSSLVSQVP 693


>AY075488-1|AAL68298.1|  308|Drosophila melanogaster RE41571p
           protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 746 PATTTV-TMSKSMITNASFRTKKLPDDIPIQAGQATTAESTD-VLTSITEEGESET 585
           PAT    T  KS  T+A   T K   D PI    +T   STD   T  TE GE  T
Sbjct: 192 PATDAPGTTEKSETTDAPGTTDKSDTDAPITDEPSTAETSTDEPNTETTESGEETT 247


>AE014298-2819|AAF48936.1|  308|Drosophila melanogaster CG7876-PA
           protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 746 PATTTV-TMSKSMITNASFRTKKLPDDIPIQAGQATTAESTD-VLTSITEEGESET 585
           PAT    T  KS  T+A   T K   D PI    +T   STD   T  TE GE  T
Sbjct: 192 PATDAPGTTEKSETTDAPGTTDKSDTDAPITDEPSTAETSTDEPNTETTESGEETT 247


>AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA
           protein.
          Length = 1027

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = -2

Query: 413 MVDGLQKTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHITPDSLDID 264
           ++DG  + ADS+V++  TS D  +S++    +S +    S + P++  ID
Sbjct: 737 LLDGSSQEADSNVDSEPTSIDIDLSVSPYGGNSSSMADNSRLPPNNDVID 786


>AE014298-1830|AAN09644.1|  582|Drosophila melanogaster CG32644-PB
           protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 21/83 (25%), Positives = 34/83 (40%)
 Frame = -2

Query: 773 PMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEGE 594
           P+  +     +TTT T+  S  TNA+F T         +A   TT E T   T  T   +
Sbjct: 248 PVTTTTTTEASTTTTTIEPSTSTNAAFTT-----TTSTEASTTTTTEGTTTSTEQTTTTK 302

Query: 593 SETAPIQRGIIARNSKAKLSSFP 525
           + +      I+   ++   S+ P
Sbjct: 303 TTSPSTSTEILTTTTELTTSTEP 325


>AE014296-2056|AAF49992.1|  401|Drosophila melanogaster CG5897-PA
           protein.
          Length = 401

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -1

Query: 624 CADFNYRGRRIGNCSDTTRHNCSKFESQTIFFPSIRQKN 508
           C+   Y  R+ GNC     H CSK +   I  P     N
Sbjct: 237 CSVGRYFNRKTGNCQSWMPHYCSKDDEDNILTPPSTDHN 275


>AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p protein.
          Length = 1052

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 428  GGSGDMVDGLQKTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHITP 282
            G +G +VDGL   A+ S +   TS     S T   NSS +S+      P
Sbjct: 1003 GVTGSVVDGLMVAANGSGQGGPTSTTSTTSSTPNSNSSSSSNQSPPAAP 1051


>AY061159-1|AAL28707.1|  129|Drosophila melanogaster LD12764p
           protein.
          Length = 129

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +1

Query: 688 VRNDAFVIIDLDMVTVVVAGDNATLIPIGPSNGCPEALFFSEFITALVTIITSGNN 855
           VR     ++ + M+T+VV      +IP+  S G  +   F++F  ALVT   SG +
Sbjct: 4   VRPMVIAMVMMMMMTLVVHW-RQIIIPVASSGGNSDGRLFTKFPCALVTTSISGGS 58


>AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB,
            isoform B protein.
          Length = 1052

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 428  GGSGDMVDGLQKTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHITP 282
            G +G +VDGL   A+ S +   TS     S T   NSS +S+      P
Sbjct: 1003 GVTGSVVDGLMVAANGSGQGGPTSTTSTTSSTPNSNSSSSSNQSPPAAP 1051


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,278,179
Number of Sequences: 53049
Number of extensions: 759281
Number of successful extensions: 2705
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2696
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)