Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18f07r
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040641-4|AAB94945.1| 451|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF040641-3|AAT81205.1| 509|Caenorhabditis elegans Hypothetical ... 54 1e-07
CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical ... 33 0.27
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 32 0.63
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division... 30 2.6
U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 5.9
Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical pr... 28 7.8
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 7.8
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 28 7.8
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 28 7.8
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 28 7.8
>AF040641-4|AAB94945.1| 451|Caenorhabditis elegans Hypothetical
protein D1069.3a protein.
Length = 451
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/98 (30%), Positives = 52/98 (53%)
Frame = -2
Query: 890 AVKDVDQRAQYELFPEVMIVTSAVINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSM 711
A+ + RAQYE+ P+ ++V +++ NSL +N + G + + P T + M
Sbjct: 286 AIDAIHLRAQYEMLPDTLLVVNSLRNSLLDNMWSKEKRGEL---MWTRPQHKDQTKRRDM 342
Query: 710 ITNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEG 597
+TNAS + K++P+DIP+ Q + S + EEG
Sbjct: 343 VTNASLKMKRMPEDIPVLERQKESTSSR--FNELMEEG 378
>AF040641-3|AAT81205.1| 509|Caenorhabditis elegans Hypothetical
protein D1069.3b protein.
Length = 509
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/98 (30%), Positives = 52/98 (53%)
Frame = -2
Query: 890 AVKDVDQRAQYELFPEVMIVTSAVINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSM 711
A+ + RAQYE+ P+ ++V +++ NSL +N + G + + P T + M
Sbjct: 286 AIDAIHLRAQYEMLPDTLLVVNSLRNSLLDNMWSKEKRGEL---MWTRPQHKDQTKRRDM 342
Query: 710 ITNASFRTKKLPDDIPIQAGQATTAESTDVLTSITEEG 597
+TNAS + K++P+DIP+ Q + S + EEG
Sbjct: 343 VTNASLKMKRMPEDIPVLERQKESTSSR--FNELMEEG 378
>CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical
protein C42C1.2 protein.
Length = 574
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -2
Query: 374 ETNGTSKDEKISMTSVHNSSENSDTRSHITPDSLDIDTTPRFA 246
E NG S DEK S T NS+EN D +TP D + + FA
Sbjct: 126 EMNGFSSDEKKSETRKRNSNENDDD-PMLTPGGDDTEKSSMFA 167
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = -2
Query: 830 TSAVINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAG 651
T+ + S + ++ +P + S + SP T+TVT S S T + P
Sbjct: 429 TTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVT---------TPTSTE 479
Query: 650 QATTAESTDVLTSITEEGESETAP 579
+T+ S+ V TS T S T P
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGP 503
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = -2
Query: 830 TSAVINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAG 651
T+ + S + ++ +P + S + SP T+TVT S S T + P
Sbjct: 429 TTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVT---------TPTSTE 479
Query: 650 QATTAESTDVLTSITEEGESETAP 579
+T+ S+ V TS T S T P
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGP 503
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 377 VETNGTSKDEKISMTSVHNS-SENSDTRSHITPDSLDIDTTPR 252
V+ NG + E+ + H+S + T SH+TP I+TTP+
Sbjct: 351 VQHNGITHHEESTAQHYHDSMNAGPSTSSHVTPQMSMINTTPQ 393
>AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division
cycle related protein25.1 protein.
Length = 604
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = -2
Query: 416 DMVDGLQKTADSSVETNGTSKDEKISMTSVHNSSENS 306
D+ +G+ ++ + E +G+S+D +SMTS + S+ S
Sbjct: 24 DVANGINESPKTLFEEDGSSRDSGVSMTSCSDKSDAS 60
>U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical
protein C06A6.2a protein.
Length = 639
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 199 TSGLVYSNYTELTCMAAKRGVVSISNESGVICERVSE 309
TS L NY+EL M K ++ + NE+G +RV +
Sbjct: 403 TSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVKQ 439
>U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical
protein C06A6.2b protein.
Length = 642
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 199 TSGLVYSNYTELTCMAAKRGVVSISNESGVICERVSE 309
TS L NY+EL M K ++ + NE+G +RV +
Sbjct: 403 TSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVKQ 439
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -1
Query: 711 DNKCIIPH*ETARRYSNTSRTSDNSRVHRCADFNYRGRRIGNCSDTTRHNCSK 553
D+ C P + +R + + +C F YRG + + + TR NC K
Sbjct: 786 DDPCTAPPRNPGVGEFHATRWAFDGSARKCVPFEYRGMKGNSNNFLTRENCEK 838
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = -2
Query: 821 VINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAGQAT 642
+ N +K+ PFD + + +TTT T A+ T P P AG
Sbjct: 2000 IYNFVKSRGYNTPFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTP-STP-GAGTTG 2057
Query: 641 TAESTDVLTSITEEGESETAPI 576
T + +T+ G S T PI
Sbjct: 2058 TPGTGPTVTAAPTNGISTTQPI 2079
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = -2
Query: 821 VINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAGQAT 642
+ N +K+ PFD + + +TTT T A+ T P P AG
Sbjct: 2000 IYNFVKSRGYNTPFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTP-STP-GAGTTG 2057
Query: 641 TAESTDVLTSITEEGESETAPI 576
T + +T+ G S T PI
Sbjct: 2058 TPGTGPTVTAAPTNGISTTQPI 2079
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = -2
Query: 821 VINSLKNNASGQPFDGPMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAGQAT 642
+ N +K+ PFD + + +TTT T A+ T P P AG
Sbjct: 2000 IYNFVKSRGYNTPFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTP-STP-GAGTTG 2057
Query: 641 TAESTDVLTSITEEGESETAPI 576
T + +T+ G S T PI
Sbjct: 2058 TPGTGPTVTAAPTNGISTTQPI 2079
>Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical
protein C48G7.1 protein.
Length = 658
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 317 SENSDTRSHITPDSLDIDTTPRFAAMQ 237
S S + H +SLDID+TPR A+ +
Sbjct: 258 SFGSSNKEHKRKESLDIDSTPRLASCE 284
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 422 SGDMVDGLQKTADSSVETNGTSKDEKISMTSVHNSSENSDTRSHITPDS 276
SGD V + + E N KDE S T+V N+ E + T + + ++
Sbjct: 170 SGDAVTTTTELSMEDREGNDDPKDESESGTTVSNNEETTTTENKVADEA 218
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 747 TSNYNGYHVQIYDNKCIIPH*ETARRYSNTSRTSDNSRVHRCA-DFN 610
+SNY+ +NK + E R+++ TSR S++S R + DFN
Sbjct: 470 SSNYDKARSVFTENKSFDSYAEFKRKHTRTSRDSNSSNATRSSRDFN 516
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 747 TSNYNGYHVQIYDNKCIIPH*ETARRYSNTSRTSDNSRVHRCA-DFN 610
+SNY+ +NK + E R+++ TSR S++S R + DFN
Sbjct: 425 SSNYDKARSVFTENKSFDSYAEFKRKHTRTSRDSNSSNATRSSRDFN 471
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 747 TSNYNGYHVQIYDNKCIIPH*ETARRYSNTSRTSDNSRVHRCA-DFN 610
+SNY+ +NK + E R+++ TSR S++S R + DFN
Sbjct: 520 SSNYDKARSVFTENKSFDSYAEFKRKHTRTSRDSNSSNATRSSRDFN 566
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,888
Number of Sequences: 27780
Number of extensions: 395285
Number of successful extensions: 1291
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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