Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18f07f
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0437 - 3347960-3349246                                           46   5e-05
03_05_0950 - 29090734-29091747                                         41   0.001

>11_01_0437 - 3347960-3349246
          Length = 428

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +1

Query: 493 CTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLSSVAQGKKKTYRCIETLLIGIYNFEVVDE 672
           C  L+    S +  L+   L F+P L   YL  +      +    E +L+ +Y+ E  + 
Sbjct: 92  CHWLYDTLLSPDPDLRLAALAFLPLLSSLYLLRLPPALPSSLSGFEAVLLAVYSSEAKNR 151

Query: 673 NGKPKVVSFRLPSLAQSSIYHEPLS 747
            GKP +V  ++P L+  S+YH PLS
Sbjct: 152 QGKPVLV--QVPDLSVPSLYHTPLS 174


>03_05_0950 - 29090734-29091747
          Length = 337

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/85 (25%), Positives = 42/85 (49%)
 Frame = +1

Query: 484 ENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLSSVAQGKKKTYRCIETLLIGIYNFEV 663
           + +C  L+  ++S   ++Q   L+F+P L   Y+S      +K     E +L+ +Y    
Sbjct: 66  DGLCRWLYDAFQSNLPEIQLAVLRFVPALAGVYMSRAV--SRKPLAGFEAVLLALY-AHA 122

Query: 664 VDENGKPKVVSFRLPSLAQSSIYHE 738
             + G  +  +  LP+LA  S+YH+
Sbjct: 123 AAQRGSGEAETVSLPNLANPSVYHD 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,410,371
Number of Sequences: 37544
Number of extensions: 354231
Number of successful extensions: 784
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)