Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18f07f
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 34 0.001
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.60
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 1.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 24 1.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 24 1.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.2
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 23 4.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.6
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 9.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.8
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 9.8
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 34.3 bits (75), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 514 YRSKEIQLQRFTLQFIPTLIYNYLSSVAQGKKKTYRCIETLLIGIYNFEVVDENGKPKVV 693
Y K + L +PTLI NY+ +V +GK ++T +++F E G P V
Sbjct: 882 YALKFFPFDKHILDKLPTLISNYIEAVKEGKFMNVNMLDT-YESVHSFPT--ETGLPFVY 938
Query: 694 SFRLPSLAQSS 726
+F + L ++S
Sbjct: 939 TFNVIKLTKTS 949
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.4 bits (53), Expect = 0.60
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 282 FYIINLILSCASIEIFSV 229
FY +NLI+ C SI SV
Sbjct: 237 FYTVNLIVPCVSISYLSV 254
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 282 FYIINLILSCASIEIFSV 229
FY +NLI+ C I SV
Sbjct: 238 FYTVNLIIPCVGISFLSV 255
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 400 IFNLFYCEDETVTYNCELENDAQLVQILENV 492
I+ LF+ D+ Y+ EL A+ ++EN+
Sbjct: 38 IYELFWHVDQPTVYHPELYQKARTFNLVENL 68
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 400 IFNLFYCEDETVTYNCELENDAQLVQILENV 492
I+ LF+ D+ Y+ EL A+ ++EN+
Sbjct: 38 IYELFWHVDQPTVYHPELYQKARTFNLVENL 68
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 474 TDIRECLYTTI*FL*IK-RNTTSKIYVTIHSHSYI*LFELCGTR*KK 611
+D+ C+ + F+ T +K+ T H+YI LCG K+
Sbjct: 11 SDVSSCVIFGVLFVLFSFLRTRTKLQPTYFHHTYIIYESLCGRHEKR 57
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 474 TDIRECLYTTI*FL*IK-RNTTSKIYVTIHSHSYI*LFELCGTR*KK 611
+D+ C+ + F+ T +K+ T H+YI LCG K+
Sbjct: 11 SDVSSCVIFGVLFVLFSFLRTRTKLQPTYFHHTYIIYESLCGRHEKR 57
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 282 FYIINLILSCASIEIFSV 229
FY +NLI+ C I +V
Sbjct: 242 FYTVNLIIPCMGISFLTV 259
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 282 FYIINLILSCASIEIFSV 229
FY +NLI+ C I +V
Sbjct: 251 FYTVNLIIPCVGITFLTV 268
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 656 KLYMPISNVSMHLYVFFLPCATEL 585
K+Y+ + + MH+ LPC L
Sbjct: 24 KVYVSLGALKMHIRTHTLPCKCHL 47
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 282 FYIINLILSCASIEIFSV 229
FY +N+I+ C I +V
Sbjct: 246 FYTVNIIIPCMGISFLTV 263
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 282 FYIINLILSCASIEIFSV 229
FY +N+I+ C I +V
Sbjct: 246 FYTVNIIIPCMGISFLTV 263
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 75 VICFILPI*CFFRFKCVIALVYQLFSVCESA 167
++ FIL + +R C++++ Q F E A
Sbjct: 54 ILQFILDVRLDYRISCLLSIFKQEFDETERA 84
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 282 FYIINLILSCASI 244
FY+ NLIL C I
Sbjct: 215 FYVFNLILPCILI 227
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 75 VICFILPI*CFFRFKCVIALVYQLFSVCESA 167
++ FIL + +R C++++ Q F E A
Sbjct: 22 ILQFILDVRLDYRISCLLSIFKQEFDETERA 52
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,533
Number of Sequences: 438
Number of extensions: 4728
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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