Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18f01r
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 194 6e-50
01_06_0663 - 30991390-30992340 104 1e-22
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 93 2e-19
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 93 4e-19
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 92 5e-19
05_07_0134 - 27911920-27912762 80 2e-15
06_01_0080 + 644021-645463 40 0.003
06_03_0219 - 18227559-18227858,18227864-18228340 35 0.10
02_01_0384 - 2781362-2782299,2782320-2782428 33 0.31
12_02_0842 - 23588826-23589198,23589548-23590203 32 0.54
03_02_0386 + 8009884-8010133,8010274-8010338,8010545-8010658,801... 31 1.2
07_01_0885 + 7353926-7354770,7354845-7355487 30 2.2
04_01_0035 - 433848-434372,434905-435381 30 2.9
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.8
07_03_1086 + 23858419-23859423,23859527-23859610 29 5.0
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 6.7
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 29 6.7
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.7
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 8.8
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 8.8
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 194 bits (474), Expect = 6e-50
Identities = 112/287 (39%), Positives = 165/287 (57%), Gaps = 12/287 (4%)
Frame = -1
Query: 848 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY 669
MA NLV G+ V +D +++ + + +G+ S +++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 668 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 525
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 524 GVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGM 345
GV A+ L FM GG +E + + PLL MG K +CG G+G VAK+ NNM M I+ +
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 180
Query: 344 ATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNEL 165
+E +G +G++ VL D+ N SSAR WS++ Y PVPG++ PSSRNYDGGF ++L
Sbjct: 181 GVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVPSSRNYDGGFTSKL 240
Query: 164 MVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 24
M KDL+LA A G+ P G+ A ++YR + + G KDFS F+
Sbjct: 241 MTKDLDLAMASASGVGFNCPFGSQALEIYRKLCADGCELKDFSCAFR 287
>01_06_0663 - 30991390-30992340
Length = 316
Score = 104 bits (249), Expect = 1e-22
Identities = 84/279 (30%), Positives = 122/279 (43%), Gaps = 1/279 (0%)
Frame = -1
Query: 884 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVS 705
VA++G G MG MA +L+ G+ + Y+ + G T A S
Sbjct: 22 VAWVGTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRAAAAAADVIFL 81
Query: 704 ILTSNKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 528
++ V L G +A G LL+D +T DP + +I A K DAPVS
Sbjct: 82 MVGFPSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVS 141
Query: 527 GGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITG 348
GG GA++ATL+ AGG R PL K+MG + G G+GQ AKL N + + T
Sbjct: 142 GGDRGARSATLSIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAKLGNQIAIASTM 200
Query: 347 MATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNE 168
+ E M K GL+ L+ ++ +A S S ++Y R+ GF
Sbjct: 201 VGLVEGMVYAHKAGLDVAKWLEAISTGAAGSKSLDLY-------GKRMLERDMAAGFYVR 253
Query: 167 LMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYG 51
VKDL + + +P A+A QLY + + G G
Sbjct: 254 HFVKDLGICLSECQAMGLALPGLALAHQLYVSLLAHGEG 292
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 93.5 bits (222), Expect = 2e-19
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Frame = -1
Query: 563 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVA 384
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 383 KLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAP 204
KL NM+MG A +E +++ GL P+ LLDVL+ + + P+ L +
Sbjct: 170 KLVVNMIMGSMMNALSEGLSLADNSGLSPQTLLDVLDLGAIAN-------PMFKLKGPSM 222
Query: 203 SSRNYDGGFKNELMVKDLELASGMALGIRSPI--PLGAVATQLYRIVQSRGYGQKDFSFV 30
+Y+ F + KD+ LA +ALG + + P+ A + + ++ +S G G DFS V
Sbjct: 223 LQGSYNPAFPLKHQQKDMRLA--LALGDENAVSMPVAAASNEAFKKARSLGLGDLDFSAV 280
Query: 29 FQLLK 15
+++LK
Sbjct: 281 YEVLK 285
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1
Query: 884 VAFLGLGNMGGFMAANLVKKGFTV 813
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
Score = 25.8 bits (54), Expect(2) = 0.002
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 692 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 600
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 92.7 bits (220), Expect = 4e-19
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 2/296 (0%)
Frame = -1
Query: 884 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVS 705
V FLGLG MG MA+NL+ G V ++ ++ + G S +
Sbjct: 53 VGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFA 112
Query: 704 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD-APVS 528
+L + ++V G +G G +D ST+D K I G F + S
Sbjct: 113 MLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFS 172
Query: 527 GGVMGAQNATLAFMA-GGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGIT 351
+G F + + ++ + + +F G +G G KL NM+MG
Sbjct: 173 SCTVGPMLTRYLFSRLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMGSM 232
Query: 350 GMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKN 171
++ +E + + K+GL+P L++V++ + + P+ L + Y F
Sbjct: 233 MVSFSEGLLLSEKVGLDPNTLVEVISQGA-------ISAPMFSLKGPSMVKAAYPTAFPL 285
Query: 170 ELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQLLKEENK 3
+ KDL LA +A + IP A A +LY++ +S G +DFS V + LK + +
Sbjct: 286 KHQQKDLRLALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIEALKAKEQ 341
>06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 92.3 bits (219), Expect = 5e-19
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 4/296 (1%)
Frame = -1
Query: 896 TDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXX 717
T K + F+GLG MG MA++L+K GF+V YD K L G +S
Sbjct: 322 TAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDS-PEEVSKDV 380
Query: 716 XXVSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTIDPN-VPKQIFPIALE-KGLGF 546
+ I+ +N+V + V G G V+ G+ +I SST+ P V K + E + +
Sbjct: 381 EILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKL 440
Query: 545 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHC-GQIGSGQVAKLTNN 369
DAPVSGGV A TL +K + S+ + + K + G G+ K+ N
Sbjct: 441 VDAPVSGGVKRAAEGTLT--TNMQKLVHDCSIFYVTALSEKLYVIKGGCGAASSVKMVNQ 498
Query: 368 MLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNY 189
+L G+ + AE M G ++ L + L +++ ++ SW VP ++ +Y
Sbjct: 499 LLAGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWM--FGNRVPHML-----DNDY 551
Query: 188 DGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQL 21
++ VKDL + S + R P+ + ++A QL+ + G+G+ D + V ++
Sbjct: 552 TPYSAVDIFVKDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVKV 607
>05_07_0134 - 27911920-27912762
Length = 280
Score = 80.2 bits (189), Expect = 2e-15
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 3/284 (1%)
Frame = -1
Query: 848 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY 669
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 668 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 492
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 491 FMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIK 312
+AGG + PL +G + + G GSGQ +K+ N + + + +E +
Sbjct: 121 LLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQIAVAGAVVGASEALAFANA 179
Query: 311 MGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGM 132
GL+ + LD ++ +A S +++ R + G + ++KDL +A
Sbjct: 180 AGLDAPLFLDAVSKGAAGSRVMDIF-------GERMLRREFASGGSVKYIIKDLGMALET 232
Query: 131 ALGIR--SPIPLGAVATQLYRIVQSRGYGQKDFSFVFQLLKEEN 6
G +P A+ Q++ + + G G + +++ N
Sbjct: 233 EEGPEGAKALPGAAMFRQMFSAMAANGDGDLSLQGLITVVERLN 276
>06_01_0080 + 644021-645463
Length = 480
Score = 39.9 bits (89), Expect = 0.003
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Frame = -1
Query: 884 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXXXXV 708
+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 6 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVN 65
Query: 707 SILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 546
SI V++ V G + AH ++G +ID ++ E+GL +
Sbjct: 66 SIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLY 125
Query: 545 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLP-LLKV------MGAKQFHCGQIGSGQV 387
VSGG GA+N + M GG E ++ LLKV G + G+ GSG
Sbjct: 126 LGMGVSGGEEGARNGP-SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNF 184
Query: 386 AKLTNN 369
K+ +N
Sbjct: 185 VKMVHN 190
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = +1
Query: 343 AIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMT 522
++PV+PI+ L V+L + P P C A T+RR S PP R+A P
Sbjct: 56 SLPVVPIH-LPVALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRR 113
Query: 523 PPDTGASVNPSPFS 564
PP+ PS FS
Sbjct: 114 PPELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +1
Query: 379 SLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSP 558
S A P P++ +T R LS ++ PA +R P +PP GAS P
Sbjct: 180 SSAIPPPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRR 239
Query: 559 FSRAIGKICLGTFG 600
S A C G G
Sbjct: 240 SSSAASPSCAGVEG 253
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 32.3 bits (70), Expect = 0.54
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 199 LDGAVGTSPGTGQYTSVDQERADELFSTSNRTFGSSPILMPMFMHSAVAIPVMPINMLLV 378
LDG G G+Y + ++ AD+L + +R ++PIL P S + + + L
Sbjct: 128 LDGDERGCAG-GRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPSVTLSLA 186
Query: 379 SLATCPEPICP 411
S A P P P
Sbjct: 187 SAAVAPAPAAP 197
>03_02_0386 +
8009884-8010133,8010274-8010338,8010545-8010658,
8010736-8010895,8010975-8011093,8011209-8011635,
8011834-8012057,8012863-8012973,8013056-8013188,
8013259-8013365,8013430-8013444,8013482-8013571,
8013855-8013917,8013973-8014053,8014136-8014208,
8014312-8014367,8014460-8014554,8014649-8014683,
8015449-8015525
Length = 764
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -1
Query: 335 ECMNMGIKMGLEPKVLLDV-LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMV 159
+C++MG++ G PK+ +DV L + R +V + L+ R+YDG + E M
Sbjct: 484 KCIDMGMEFGTLPKMDVDVPLTSLHIRRTLLDVPKKIDILIVIMADDRSYDG--EIEEMC 541
Query: 158 KDLELASGMALGIRSPIPLGAVATQL-YRIVQS 63
+ L + L S L VA Q+ ++V+S
Sbjct: 542 ESLRIVYVFCLPCLSKRNLKRVARQIQLKVVKS 574
>07_01_0885 + 7353926-7354770,7354845-7355487
Length = 495
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 269 SSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLE 147
S+ R W E+YCPV ++ P+ + D + L + LE
Sbjct: 216 SAIRLWKVELYCPVVAMIMEHPAHQTKDEKLQFSLNYQHLE 256
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = -1
Query: 890 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXX 711
K+V +GLG++G +A L G T+ Y+ S+ ++ + N +
Sbjct: 163 KHVGIIGLGSIGSLIAKRLQAFGCTI-SYN-SRRPKDSVSYNYFPDVTDLAAASDVLIVA 220
Query: 710 VSILTSNKVVLDVY----LGKDGVVAHAKKGSLLIDSSTI 603
++ + ++D LGKDGVV + +G ++ ++ I
Sbjct: 221 CALNDETRHIVDSSVLEALGKDGVVVNIARGGIVDEAELI 260
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 848 MAANLVKKGFTVRGYDPSKDALN 780
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -3
Query: 660 RWRCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHR 541
R R SC SEC DL ++P AGIHR
Sbjct: 10 RRRSTSCYSDSGDSSCSEPFSECGSDDLSFTPAAAAGIHR 49
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 513 THDSSRYRCICESQPFL*GYREDLFGNIRIYC 608
+H +S Y + E L +DL GNIR+YC
Sbjct: 370 SHAASGYHKVLEENRKLYNQIQDLRGNIRVYC 401
>10_08_0426 - 17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 813 NCETLFNQVRSHEPSHVSEAEESHILVG 896
N + + N V SH PSH SE E+ +L G
Sbjct: 1072 NSDKISNDVGSHSPSH-SERNEARVLTG 1098
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 635 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 754
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 884 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 756
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 412 QWNCLAPITLRRG-RDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRA 570
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,736,648
Number of Sequences: 37544
Number of extensions: 739499
Number of successful extensions: 2428
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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