Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18e21r
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102656-1|AAM27485.1|  236|Drosophila melanogaster GH04183p pro...   172   2e-43
AY071444-1|AAL49066.1|  144|Drosophila melanogaster RE52852p pro...   172   2e-43
AE014296-606|AAN11547.1|  144|Drosophila melanogaster CG12740-PD...   172   2e-43
AE014296-605|AAF47742.1|  144|Drosophila melanogaster CG12740-PB...   172   2e-43
AE014296-604|AAN11546.1|  144|Drosophila melanogaster CG12740-PA...   172   2e-43
AE014296-607|AAF47743.1|  165|Drosophila melanogaster CG12740-PC...   143   1e-34
AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p pro...    28   5.9  
AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA...    28   5.9  

>AY102656-1|AAM27485.1|  236|Drosophila melanogaster GH04183p
           protein.
          Length = 236

 Score =  172 bits (419), Expect = 2e-43
 Identities = 81/138 (58%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -3

Query: 416 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 237
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 96  SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 155

Query: 236 FTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHXRTDLCKATLRRASAILR 57
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  +  R DL +A LRRASA+LR
Sbjct: 156 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 215

Query: 56  SQR--PIKAKKAKXSRNQ 9
           SQ+  P+K KKA+ ++ +
Sbjct: 216 SQKPAPVKGKKAEFAKGK 233


>AY071444-1|AAL49066.1|  144|Drosophila melanogaster RE52852p
           protein.
          Length = 144

 Score =  172 bits (419), Expect = 2e-43
 Identities = 81/138 (58%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -3

Query: 416 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 237
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 236 FTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHXRTDLCKATLRRASAILR 57
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  +  R DL +A LRRASA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 56  SQR--PIKAKKAKXSRNQ 9
           SQ+  P+K KKA+ ++ +
Sbjct: 124 SQKPAPVKGKKAEFAKGK 141


>AE014296-606|AAN11547.1|  144|Drosophila melanogaster CG12740-PD,
           isoform D protein.
          Length = 144

 Score =  172 bits (419), Expect = 2e-43
 Identities = 81/138 (58%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -3

Query: 416 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 237
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 236 FTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHXRTDLCKATLRRASAILR 57
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  +  R DL +A LRRASA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 56  SQR--PIKAKKAKXSRNQ 9
           SQ+  P+K KKA+ ++ +
Sbjct: 124 SQKPAPVKGKKAEFAKGK 141


>AE014296-605|AAF47742.1|  144|Drosophila melanogaster CG12740-PB,
           isoform B protein.
          Length = 144

 Score =  172 bits (419), Expect = 2e-43
 Identities = 81/138 (58%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -3

Query: 416 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 237
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 236 FTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHXRTDLCKATLRRASAILR 57
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  +  R DL +A LRRASA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 56  SQR--PIKAKKAKXSRNQ 9
           SQ+  P+K KKA+ ++ +
Sbjct: 124 SQKPAPVKGKKAEFAKGK 141


>AE014296-604|AAN11546.1|  144|Drosophila melanogaster CG12740-PA,
           isoform A protein.
          Length = 144

 Score =  172 bits (419), Expect = 2e-43
 Identities = 81/138 (58%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -3

Query: 416 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 237
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 236 FTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHXRTDLCKATLRRASAILR 57
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  +  R DL +A LRRASA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 56  SQR--PIKAKKAKXSRNQ 9
           SQ+  P+K KKA+ ++ +
Sbjct: 124 SQKPAPVKGKKAEFAKGK 141


>AE014296-607|AAF47743.1|  165|Drosophila melanogaster CG12740-PC,
           isoform C protein.
          Length = 165

 Score =  143 bits (347), Expect = 1e-34
 Identities = 65/112 (58%), Positives = 85/112 (75%)
 Frame = -3

Query: 416 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 237
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 236 FTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHXRTDLCKATL 81
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  +  R DL +  +
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQVIM 115


>AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p
           protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/59 (35%), Positives = 26/59 (44%)
 Frame = -3

Query: 365 KKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAK 189
           K    K+P S   NNV+N  S      + K      +NP  K   V  KK+ AT K AK
Sbjct: 74  KTAGAKRPLS---NNVSNPDSSPSQKRLKKDNTLPKKNPVNKSSNVAAKKSAATSKSAK 129


>AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA
           protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/59 (35%), Positives = 26/59 (44%)
 Frame = -3

Query: 365 KKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAK 189
           K    K+P S   NNV+N  S      + K      +NP  K   V  KK+ AT K AK
Sbjct: 74  KTAGAKRPLS---NNVSNPDSSPSQKRLKKDNTLPKKNPVNKSSNVAAKKSAATSKSAK 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,197,727
Number of Sequences: 53049
Number of extensions: 470120
Number of successful extensions: 1038
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)