Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18e16f
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   265   3e-73
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   241   4e-66
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   241   4e-66
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   238   4e-65
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score =  265 bits (649), Expect = 3e-73
 Identities = 114/217 (52%), Positives = 162/217 (74%)
 Frame = +2

Query: 68  TVCLLSLLFVACSGIIIKNGEVQDWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYI 247
           T+  ++ L +A S I   +    +W++ +++YQIYPRSF DSDGDGIGDLNGIT+++++I
Sbjct: 5   TIVTVACLLLAASPIDCVDA---NWYKNALVYQIYPRSFQDSDGDGIGDLNGITARMDHI 61

Query: 248 KELGVGAVWLSPIFKSPMVDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLV 427
            ++G  A+WLSPI+KSP VDFGYDI+NF ++   YGT+ DF+ L+++A  L +KV+LD V
Sbjct: 62  ADIGADALWLSPIYKSPQVDFGYDISNFTDVDPVYGTLADFDRLVRRAKSLGLKVILDFV 121

Query: 428 PNHTSNESVWFQEALNGNEKYYNYFVWEDGIIDENGNRQPPNNWLSHFRGSAWEYKEEVG 607
           PNH+S+E  WF++++   + Y  Y+VW D  I  NG RQPPNNWLS F GSAW++ EE  
Sbjct: 122 PNHSSHEHPWFKKSVQRIKPYDEYYVWRDARI-VNGTRQPPNNWLSVFWGSAWQWNEERK 180

Query: 608 KYYLHQFAVGQPDLNYRNQDVVDEMKNIIRFWLGKGI 718
           +YYLHQFA GQPDLNYR+  +  EMKN++ FW+ +G+
Sbjct: 181 QYYLHQFATGQPDLNYRSAALDQEMKNVLTFWMNRGV 217


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  241 bits (591), Expect = 4e-66
 Identities = 104/190 (54%), Positives = 138/190 (72%)
 Frame = +2

Query: 146 ETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGYDIA 325
           E  I+YQ+YPRSF DS+GDGIGD+ GI  KL++  E+GV   WLSPI+ SPMVDFGYDI+
Sbjct: 28  EDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSPMVDFGYDIS 87

Query: 326 NFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFV 505
           N+ ++H  +GT+ D + L+  A+E  +K++LD VPNHTS++  WFQ +L   E Y NY++
Sbjct: 88  NYTDVHPIFGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147

Query: 506 WEDGIIDENGNRQPPNNWLSHFRGSAWEYKEEVGKYYLHQFAVGQPDLNYRNQDVVDEMK 685
           W  G I  NG R PP NW+  F GSAW ++EE   YYLHQFA  QPDLNY N  V+D+M+
Sbjct: 148 WHPGKI-VNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQFAPEQPDLNYYNPVVLDDMQ 206

Query: 686 NIIRFWLGKG 715
           N++RFWL +G
Sbjct: 207 NVLRFWLRRG 216


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score =  241 bits (591), Expect = 4e-66
 Identities = 104/190 (54%), Positives = 138/190 (72%)
 Frame = +2

Query: 146 ETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGYDIA 325
           E  I+YQ+YPRSF DS+GDGIGD+ GI  KL++  E+GV   WLSPI+ SPMVDFGYDI+
Sbjct: 28  EDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSPMVDFGYDIS 87

Query: 326 NFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFV 505
           N+ ++H  +GT+ D + L+  A+E  +K++LD VPNHTS++  WFQ +L   E Y NY++
Sbjct: 88  NYTDVHPIFGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147

Query: 506 WEDGIIDENGNRQPPNNWLSHFRGSAWEYKEEVGKYYLHQFAVGQPDLNYRNQDVVDEMK 685
           W  G I  NG R PP NW+  F GSAW ++EE   YYLHQFA  QPDLNY N  V+D+M+
Sbjct: 148 WHPGKI-VNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQFAPEQPDLNYYNPVVLDDMQ 206

Query: 686 NIIRFWLGKG 715
           N++RFWL +G
Sbjct: 207 NVLRFWLRRG 216


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score =  238 bits (582), Expect = 4e-65
 Identities = 111/227 (48%), Positives = 153/227 (67%), Gaps = 8/227 (3%)
 Frame = +2

Query: 62  MKTVCLLSLLFVACSGIIIKNGEVQDWWETSILYQIYPRSFADSDGDGIGDLNGITSKLE 241
           MK++ ++ LL     G    N   + WW+ +I YQ+YPRSF DS+ DGIGDL GI  KL 
Sbjct: 1   MKSLVVVVLLLAVGLGAGQNN---KGWWKNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLS 57

Query: 242 YIKELGVGAVWLSPIFKSPMVDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLD 421
           +  E G+ A+WLSPI +SPMVDFGYDI++F ++   +GT++D E L  +A + ++KV+LD
Sbjct: 58  HFIESGITAIWLSPINRSPMVDFGYDISDFKDVDPIFGTIKDLEDLTAEAKKQNLKVILD 117

Query: 422 LVPNHTSNESVWFQEAL-----NGNEKYYNYFVWEDGIIDENGN---RQPPNNWLSHFRG 577
           LVPNHTS++  WFQ ++     N   KY +Y++W D + D+ GN    + PNNWLS F G
Sbjct: 118 LVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVDPVKDDKGNPIKDKYPNNWLSVFNG 177

Query: 578 SAWEYKEEVGKYYLHQFAVGQPDLNYRNQDVVDEMKNIIRFWLGKGI 718
           + W + E   ++Y HQF   QPDLNYRN DV +EMKNI++FWL KGI
Sbjct: 178 TGWTFHEGRKQFYFHQFYKQQPDLNYRNSDVREEMKNIMKFWLDKGI 224


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 314 YDIANFYEIHHEYGTMEDFEALLKKANELDIK 409
           Y+I NF +  H       ++ + K  N LDI+
Sbjct: 400 YEILNFRKSEHNGTNGYQYQVVGKWFNSLDIR 431


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 314 YDIANFYEIHHEYGTMEDFEALLKKANELDIK 409
           Y+I NF +  H       ++ + K  N LDI+
Sbjct: 490 YEILNFRKSEHNGTNGYQYQVVGKWFNSLDIR 521


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,068
Number of Sequences: 438
Number of extensions: 5220
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)