Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18e05r
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 374 e-104
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 374 e-104
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 374 e-104
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 81 8e-16
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 81 8e-16
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 61 1e-09
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 59 4e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 59 4e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 59 4e-09
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 56 3e-08
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 49 4e-06
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 49 4e-06
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.2
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 30 2.7
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 2.7
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 4.7
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 6.2
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 8.2
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 8.2
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 8.2
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 374 bits (919), Expect = e-104
Identities = 172/219 (78%), Positives = 193/219 (88%)
Frame = -3
Query: 918 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 739
A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP
Sbjct: 189 ASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 248
Query: 738 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 559
N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P K A F A
Sbjct: 249 QNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHA 308
Query: 558 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 379
QVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV
Sbjct: 309 QVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIV 368
Query: 378 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 369 ELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 374 bits (919), Expect = e-104
Identities = 172/219 (78%), Positives = 193/219 (88%)
Frame = -3
Query: 918 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 739
A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP
Sbjct: 223 ASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
Query: 738 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 559
N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P K A F A
Sbjct: 283 QNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHA 342
Query: 558 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 379
QVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV
Sbjct: 343 QVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIV 402
Query: 378 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 403 ELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 374 bits (919), Expect = e-104
Identities = 172/219 (78%), Positives = 193/219 (88%)
Frame = -3
Query: 918 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 739
A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP
Sbjct: 223 ASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
Query: 738 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 559
N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P K A F A
Sbjct: 283 QNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHA 342
Query: 558 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 379
QVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV
Sbjct: 343 QVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIV 402
Query: 378 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 403 ELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 113 bits (271), Expect = 2e-25
Identities = 68/219 (31%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Frame = -3
Query: 912 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 736
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPN 375
Query: 735 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQ 556
+V + + V GDN+ F +K + EL+ G++ S ++ K F A+
Sbjct: 376 KQPVQVLQIWADDVETERVVAGDNIKFKLKGIEENELQGGFII-CSPDSLAKTGRVFDAE 434
Query: 555 VIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVN 376
V+VL H I++GY+ VL +A + +D++TG+ K +K + I+
Sbjct: 435 VLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEKCIMR 492
Query: 375 LVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 262
L +P +E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 493 LESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein
K07A12.4b protein.
Length = 592
Score = 81.4 bits (192), Expect = 8e-16
Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Frame = -3
Query: 915 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 736
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMS 429
Query: 735 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTA 559
++T +++ + GD + ++ E ++ G V + + + F
Sbjct: 430 SVTAATVKECANNDGSRHCFAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEV 489
Query: 558 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 379
+++ I G L H+ + C F + +++ G+ + P+ I G +A+V
Sbjct: 490 RLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVV 549
Query: 378 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+ + +E+F LGR R T+A G+++ V
Sbjct: 550 EIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein
K07A12.4a protein.
Length = 610
Score = 81.4 bits (192), Expect = 8e-16
Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Frame = -3
Query: 915 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 736
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMS 447
Query: 735 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTA 559
++T +++ + GD + ++ E ++ G V + + + F
Sbjct: 448 SVTAATVKECANNDGSRHCFAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEV 507
Query: 558 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 379
+++ I G L H+ + C F + +++ G+ + P+ I G +A+V
Sbjct: 508 RLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVV 567
Query: 378 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+ + +E+F LGR R T+A G+++ V
Sbjct: 568 EIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Frame = -3
Query: 852 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 685
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVG 431
Query: 684 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 505
G + F +K + K++R+G V D K P F A+++VL+HP I Y +
Sbjct: 432 IVKCGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAM 490
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIK 400
L + + ++V RTG +V K I+
Sbjct: 491 LHIGSVRQTATLVSMGKEV-LRTGDRDKVQFKFIR 524
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 59.3 bits (137), Expect = 4e-09
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 8/224 (3%)
Frame = -3
Query: 909 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAP 739
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I +
Sbjct: 231 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGG 289
Query: 738 ANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAA 571
T VKSV E + + +A PGD +G ++ + K++RRG V + + K
Sbjct: 290 TKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTD 348
Query: 570 DFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSG 394
AQ+ VL TP+ + + H+ + +G S + K + G
Sbjct: 349 KVKAQLYVLKE--SEGGAKTPIANYFSEHVF--------SLTWDSGASVRIIGKDFVMPG 398
Query: 393 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
++A V L + + +E P RF +R +T+ GV V
Sbjct: 399 ESAEVELSLNSQMFIE------PQQRFTIRKGAKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 59.3 bits (137), Expect = 4e-09
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 8/224 (3%)
Frame = -3
Query: 909 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAP 739
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I +
Sbjct: 232 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGG 290
Query: 738 ANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAA 571
T VKSV E + + +A PGD +G ++ + K++RRG V + + K
Sbjct: 291 TKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTD 349
Query: 570 DFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSG 394
AQ+ VL TP+ + + H+ + +G S + K + G
Sbjct: 350 KVKAQLYVLKE--SEGGAKTPIANYFSEHVF--------SLTWDSGASVRIIGKDFVMPG 399
Query: 393 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
++A V L + + +E P RF +R +T+ GV V
Sbjct: 400 ESAEVELSLNSQMFIE------PQQRFTIRKGAKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 59.3 bits (137), Expect = 4e-09
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 8/224 (3%)
Frame = -3
Query: 909 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAP 739
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I +
Sbjct: 232 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGG 290
Query: 738 ANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAA 571
T VKSV E + + +A PGD +G ++ + K++RRG V + + K
Sbjct: 291 TKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTD 349
Query: 570 DFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSG 394
AQ+ VL TP+ + + H+ + +G S + K + G
Sbjct: 350 KVKAQLYVLKE--SEGGAKTPIANYFSEHVF--------SLTWDSGASVRIIGKDFVMPG 399
Query: 393 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
++A V L + + +E P RF +R +T+ GV V
Sbjct: 400 ESAEVELSLNSQMFIE------PQQRFTIRKGAKTIGTGVFTDV 437
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = -3
Query: 852 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 685
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVG 432
Query: 684 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 505
G + F +K + K++R+G V D K P F A+++VL+HP I Y +
Sbjct: 433 IVKCGQSASFALKKIPKKDVRQGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAM 491
Query: 504 L 502
L
Sbjct: 492 L 492
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = -3
Query: 903 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANI 730
LI+ALD++ P R +P+ I G GTV VG +E GVLK G V +
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTL 281
Query: 729 TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 604
T +++ ++++E GD+ G + V ++RG AG
Sbjct: 282 QTTASDIQVFGKSVKEVRAGDHCGVLCRGVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = -3
Query: 903 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANI 730
LI+ALD++ P R +P+ I G GTV VG +E GVLK G V +
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTL 281
Query: 729 TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 604
T +++ ++++E GD+ G + V ++RG AG
Sbjct: 282 QTTASDIQVFGKSVKEVRAGDHCGVLCRGVKGDTVKRGMWAG 323
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = -3
Query: 852 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQ 685
P ++++Y + +G V G + G L G V+ P T V S+ +A+
Sbjct: 402 PAFFTIEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVG 461
Query: 684 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
PG+ ++ LRRG V + + PP +FTA +++L H
Sbjct: 462 CVNPGEAASISLNLPDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.054
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -3
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 703
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 250
Query: 702 HHEALQEAVPGDNVGFNV 649
+ + + G F V
Sbjct: 251 WKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 35.5 bits (78), Expect = 0.054
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -3
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 703
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209
Query: 702 HHEALQEAVPGDNVGFNV 649
+ + + G F V
Sbjct: 210 WKQRVGQVAAGARAAFLV 227
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +2
Query: 545 STMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLT 721
ST T A+ + P ++ P + FT +S + S R S +S D T
Sbjct: 4 STATVAIIQSEPSTSSSSSPSSSRPEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDST 63
Query: 722 SVVMLAGAKTTMVPGFN--TPVSTLPTGTVPIPPILY 826
V + + VP + VST PT +PPI Y
Sbjct: 64 PVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +2
Query: 536 GWLSTMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CI 706
G ST T A S AP GGLF + T P + T F T +P T
Sbjct: 446 GASSTTTPA--STAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 707 STDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIP 814
+T + L +T+ + P +T T T+P P
Sbjct: 504 TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 554 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVM 733
T A +AAP GGLF + T P T F T +P TA+ + T +
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527
Query: 734 LAGAKTTMVPGFNTPVSTLPT 796
+ T+ +P P PT
Sbjct: 528 TTTSTTSTLP---KPAEATPT 545
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 768 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 643
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 146 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 301
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 200 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 352
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 121 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 14
KR NS++F I+ C + F Y++ + +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 802
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 803 VPIPPILYTSCRGRRRGL 856
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 802
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 803 VPIPPILYTSCRGRRRGL 856
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 802
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 803 VPIPPILYTSCRGRRRGL 856
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTE 421
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTE 421
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTE 421
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,751,609
Number of Sequences: 27780
Number of extensions: 489169
Number of successful extensions: 1524
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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