Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18e05r
(923 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 429 e-122
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 420 e-119
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 233 2e-63
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 213 2e-57
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 46 6e-07
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.7
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.7
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.9
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 9.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 9.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 9.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 429 bits (1058), Expect = e-122
Identities = 202/220 (91%), Positives = 209/220 (95%)
Frame = -3
Query: 915 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 736
+GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA
Sbjct: 224 EGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPA 283
Query: 735 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQ 556
+TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQ
Sbjct: 284 GLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQ 343
Query: 555 VIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVN 376
VIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV
Sbjct: 344 VIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVM 403
Query: 375 LVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 256
LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 404 LVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 420 bits (1034), Expect = e-119
Identities = 197/221 (89%), Positives = 209/221 (94%)
Frame = -3
Query: 918 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 739
ADGK LIEALDAILPP+RPTDK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG +V FAP
Sbjct: 223 ADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAP 282
Query: 738 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 559
A +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTA
Sbjct: 283 AALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTA 342
Query: 558 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 379
QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV
Sbjct: 343 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIV 402
Query: 378 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 256
L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 403 MLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443
Score = 21.8 bits (44), Expect = 9.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 665 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 772
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 233 bits (569), Expect = 2e-63
Identities = 108/119 (90%), Positives = 113/119 (94%)
Frame = -3
Query: 717 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 537 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 361
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 213 bits (520), Expect = 2e-57
Identities = 100/108 (92%), Positives = 103/108 (95%)
Frame = -3
Query: 915 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 736
+GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA
Sbjct: 167 EGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPA 226
Query: 735 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 592
+TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 227 GLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 45.6 bits (103), Expect = 6e-07
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 915 DGKCLIEALDAILPPARPTDK 853
+GKCLIEALDAILPP RPTDK
Sbjct: 151 EGKCLIEALDAILPPTRPTDK 171
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 KYRSCMKNCAVNSSSYFLPLVAFS 220
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 KYRSCMKNCAVNSSSYFLPLVAFS 220
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 KYRSCMKNCAVNSSSYFLPLVAFS 220
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 3.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 110 CSPFFLRNTFR*MKYRSCMKN 172
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 639 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 532
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 520 RLHTSLGLPHCPHC 479
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 9.0
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 436 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 615
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 616 TTT 624
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 9.0
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 436 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 615
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 616 TTT 624
T T
Sbjct: 137 TVT 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,325
Number of Sequences: 438
Number of extensions: 5594
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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