Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18e04f
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    27   0.15 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.5  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   9.9  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -1

Query: 192 RQSGL*RNIQ*GQHKYVTPHNFTIHFKRNIRNVTLFIHI-SACTSRCFFNNNSQDMHSRN 16
           +QSG+  N+   +H  +   N  I+F R      LF HI + C +  + ++N + +  + 
Sbjct: 126 QQSGIFINLPFLEHNLIRLKNCVIYFNRIFGWNILFGHIFTVCRTLIYIDDNVKGLGKQY 185

Query: 15  NV 10
           N+
Sbjct: 186 NI 187


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 94  HVTNISFKMYRKIVWCYVFVLTLL 165
           H+T   FK+ + + +CY+  L  L
Sbjct: 204 HITMAHFKIIQVVPYCYINCLIYL 227


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 363 ARVRLGQRGAPELQTRRLQPYPLGTALTVACLAPPFLKTDP 241
           A V+L       L+  R  PYP+    + +   PP +   P
Sbjct: 248 ATVQLSTCTRTTLKNNRASPYPMQRPKSASLSPPPHVYNPP 288


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 120 HFKRNIRNVTLFI 82
           HF+R I++V LF+
Sbjct: 220 HFRRQIKSVDLFV 232


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 120 HFKRNIRNVTLFI 82
           HF+R I++V LF+
Sbjct: 176 HFRRQIKSVDLFV 188


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 329 NSKLGGCSHIPSAPRLLSPAS 267
           NS L      PS+PR+ SP+S
Sbjct: 57  NSTLDPGRKSPSSPRISSPSS 77


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 135 HNFTIHFKRNIRNVTLFIH 79
           HNF  H++ N   + L+ H
Sbjct: 407 HNFDRHYEENRAPLGLYFH 425


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 196 GPTVWSLTKYPIRSTQIRNTTQ 131
           GP     +KYPI+  ++R  T+
Sbjct: 53  GPIPTKSSKYPIKRKRVRFQTR 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,926
Number of Sequences: 336
Number of extensions: 2558
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)