Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18e04f
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p pro...    73   3e-13
AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p pro...    73   3e-13
AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA...    73   3e-13
AF145636-1|AAD38611.1|  683|Drosophila melanogaster BcDNA.GH0718...    29   6.0  
AE014297-4283|AAF56830.1|  683|Drosophila melanogaster CG14526-P...    29   6.0  

>BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p
           protein.
          Length = 1567

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 307 LQPPSLEFGRAALAEPHARRVTLTNL-ANTTIHLASVAGTTPDFHASFFESKTLAPQANT 483
           L P  L+FG  ++ +  ++ VTL N  +N T+ L +VAG +P F++SF  ++ + PQ NT
Sbjct: 56  LVPSRLDFGTWSVGQARSQTVTLFNQHSNRTLQLNAVAGPSPAFYSSFLGTREVPPQGNT 115

Query: 484 TFSVVYLGRHEGPASAHLYIHTSLG 558
           TF+VV+L R  G  +A L IHTS G
Sbjct: 116 TFNVVFLPRQLGAIAADLLIHTSFG 140


>AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p
           protein.
          Length = 1561

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 307 LQPPSLEFGRAALAEPHARRVTLTNL-ANTTIHLASVAGTTPDFHASFFESKTLAPQANT 483
           L P  L+FG  ++ +  ++ VTL N  +N T+ L +VAG +P F++SF  ++ + PQ NT
Sbjct: 50  LVPSRLDFGTWSVGQARSQTVTLFNQHSNRTLQLNAVAGPSPAFYSSFLGTREVPPQGNT 109

Query: 484 TFSVVYLGRHEGPASAHLYIHTSLG 558
           TF+VV+L R  G  +A L IHTS G
Sbjct: 110 TFNVVFLPRQLGAIAADLLIHTSFG 134


>AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA
           protein.
          Length = 1567

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 307 LQPPSLEFGRAALAEPHARRVTLTNL-ANTTIHLASVAGTTPDFHASFFESKTLAPQANT 483
           L P  L+FG  ++ +  ++ VTL N  +N T+ L +VAG +P F++SF  ++ + PQ NT
Sbjct: 56  LVPSRLDFGTWSVGQARSQTVTLFNQHSNRTLQLNAVAGPSPAFYSSFLGTREVPPQGNT 115

Query: 484 TFSVVYLGRHEGPASAHLYIHTSLG 558
           TF+VV+L R  G  +A L IHTS G
Sbjct: 116 TFNVVFLPRQLGAIAADLLIHTSFG 140


>AF145636-1|AAD38611.1|  683|Drosophila melanogaster BcDNA.GH07188
           protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +1

Query: 325 EFGRAALAEPHARRVTLTNLANTTIHLASVAGTTPDFHASFFESKTLAPQANTTFSVVYL 504
           EFG   L E  + +    +  NTT  +A   G TP F      +K L   A+ T + +YL
Sbjct: 127 EFGTMPLLEGSSWQEDDFDWLNTTARMAYRYGITPIFGIEV--NKDL---ASNTRNRIYL 181

Query: 505 GRHEGPASAH-LYIHTSLGVFK 567
           G+ + P  A  +Y+  +  V++
Sbjct: 182 GQQDFPLEARSMYVDDATAVYR 203


>AE014297-4283|AAF56830.1|  683|Drosophila melanogaster CG14526-PA
           protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +1

Query: 325 EFGRAALAEPHARRVTLTNLANTTIHLASVAGTTPDFHASFFESKTLAPQANTTFSVVYL 504
           EFG   L E  + +    +  NTT  +A   G TP F      +K L   A+ T + +YL
Sbjct: 127 EFGTMPLLEGSSWQEDDFDWLNTTARMAYRYGITPIFGIEV--NKDL---ASNTRNRIYL 181

Query: 505 GRHEGPASAH-LYIHTSLGVFK 567
           G+ + P  A  +Y+  +  V++
Sbjct: 182 GQQDFPLEARSMYVDDATAVYR 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,895,645
Number of Sequences: 53049
Number of extensions: 492604
Number of successful extensions: 1351
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)