Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d22f
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 177 3e-44
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 177 3e-44
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 57 8e-08
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 57 8e-08
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 57 8e-08
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 57 8e-08
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 57 8e-08
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 55 2e-07
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 54 7e-07
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 54 7e-07
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 52 2e-06
AF103341-1|AAD20510.1| 120|Homo sapiens immunoglobulin heavy ch... 30 7.6
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 177 bits (432), Expect = 3e-44
Identities = 81/139 (58%), Positives = 103/139 (74%)
Frame = +1
Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 13 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 72
Query: 457 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGD 636
YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+I E P+ L LNP ++ D
Sbjct: 73 EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD 132
Query: 637 QLPVVLYESVIDVVNGRAT 693
LPV ++ESVID++NG AT
Sbjct: 133 -LPVSVFESVIDIINGEAT 150
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 177 bits (432), Expect = 3e-44
Identities = 81/139 (58%), Positives = 103/139 (74%)
Frame = +1
Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 43 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 102
Query: 457 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGD 636
YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+I E P+ L LNP ++ D
Sbjct: 103 EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD 162
Query: 637 QLPVVLYESVIDVVNGRAT 693
LPV ++ESVID++NG AT
Sbjct: 163 -LPVSVFESVIDIINGEAT 180
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 56.8 bits (131), Expect = 8e-08
Identities = 44/183 (24%), Positives = 75/183 (40%)
Frame = +1
Query: 160 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 339
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 340 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 519
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 520 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVLYESVIDVVNGRATNA 699
WY TG +E + +H P+ L ++ + +NG ++ + Y S + V GR
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGV 230
Query: 700 TST 708
T
Sbjct: 231 MFT 233
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 56.8 bits (131), Expect = 8e-08
Identities = 44/183 (24%), Positives = 75/183 (40%)
Frame = +1
Query: 160 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 339
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 340 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 519
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 520 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVLYESVIDVVNGRATNA 699
WY TG +E + +H P+ L ++ + +NG ++ + Y S + V GR
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGV 230
Query: 700 TST 708
T
Sbjct: 231 MFT 233
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 56.8 bits (131), Expect = 8e-08
Identities = 44/183 (24%), Positives = 75/183 (40%)
Frame = +1
Query: 160 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 339
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 340 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 519
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 520 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVLYESVIDVVNGRATNA 699
WY TG +E + +H P+ L ++ + +NG ++ + Y S + V GR
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGV 230
Query: 700 TST 708
T
Sbjct: 231 MFT 233
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 56.8 bits (131), Expect = 8e-08
Identities = 44/183 (24%), Positives = 75/183 (40%)
Frame = +1
Query: 160 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 339
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 340 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 519
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 520 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVLYESVIDVVNGRATNA 699
WY TG +E + +H P+ L ++ + +NG ++ + Y S + V GR
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGV 230
Query: 700 TST 708
T
Sbjct: 231 MFT 233
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 56.8 bits (131), Expect = 8e-08
Identities = 44/183 (24%), Positives = 75/183 (40%)
Frame = +1
Query: 160 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 339
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 57 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 105
Query: 340 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 519
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 106 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 164
Query: 520 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVLYESVIDVVNGRATNA 699
WY TG +E + +H P+ L ++ + +NG ++ + Y S + V GR
Sbjct: 165 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGV 223
Query: 700 TST 708
T
Sbjct: 224 MFT 226
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 55.2 bits (127), Expect = 2e-07
Identities = 44/186 (23%), Positives = 77/186 (41%)
Frame = +1
Query: 160 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 339
AS+ P++ P PT P P PG LHP+++ + + + R +G
Sbjct: 54 ASAQAPVQTPAPTLPGPALPGP---------FPGGRVVRLHPVLLASTVDSYER--RNKG 102
Query: 340 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 519
+ V+G L+G ++EV N F + ++ NM E K+V + LG
Sbjct: 103 AAR-VIGTLLGTVNKHSVEVTNCFSVSYNESDEVVVDMEFAKNM-YELHKKVSPNELILG 160
Query: 520 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVLYESVIDVVNGRATNA 699
WY G +E + +H P+ L ++ + +NG + + Y S + V GR
Sbjct: 161 WYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-HMSIKAYVSTLMGVPGRTVGV 219
Query: 700 TSTFNI 717
+ +
Sbjct: 220 FTPLTV 225
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 53.6 bits (123), Expect = 7e-07
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Frame = +1
Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 457 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH---RQICDINECPVMLMLNP 618
++ E FK+V + +GWY TG + DIA++ ++ C N V++ + P
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCP-NSVLVIIDVKP 128
Query: 619 AGRNGDQLPVVLYESVIDVVNGRATNATSTF 711
LP Y SV + V+ T + TF
Sbjct: 129 KDLG---LPTEAYISV-EEVHDDGTPTSKTF 155
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 53.6 bits (123), Expect = 7e-07
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Frame = +1
Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 457 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH---RQICDINECPVMLMLNP 618
++ E FK+V + +GWY TG + DIA++ ++ C N V++ + P
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCP-NSVLVIIDVKP 128
Query: 619 AGRNGDQLPVVLYESVIDVVNGRATNATSTF 711
LP Y SV + V+ T + TF
Sbjct: 129 KDLG---LPTEAYISV-EEVHDDGTPTSKTF 155
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 52.0 bits (119), Expect = 2e-06
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Frame = +1
Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-VKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 457 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH---RQICDINECPVMLMLNP 618
++ E FK+V + +GWY TG + DIA++ ++ C N V++ + P
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCP-NSVLVIIDVKP 128
Query: 619 AGRNGDQLPVVLYESV-IDVVNGRATNAT 702
LP Y SV D +G T+ T
Sbjct: 129 KDLG---LPTEAYISVEEDQDDGTPTSKT 154
>AF103341-1|AAD20510.1| 120|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 120
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 105 NSGIRELNELKLEDYIMRNKYLYCLDYRNQFVGIF 1
NS ++N L++ED + YC YRN +VGIF
Sbjct: 68 NSLYLQMNSLRVEDTAV----YYCARYRNSYVGIF 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,721,080
Number of Sequences: 237096
Number of extensions: 1777350
Number of successful extensions: 5738
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5704
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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