Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18d22f
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p pro...   195   5e-50
AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA...   195   5e-50
AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...    51   1e-06
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...    51   1e-06
M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.       49   8e-06
AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p pro...    35   0.13 
AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA ...    35   0.13 
AE013599-160|AAF57273.2|  286|Drosophila melanogaster CG8335-PA ...    31   1.3  
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    31   2.2  

>AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p
           protein.
          Length = 341

 Score =  195 bits (476), Expect = 5e-50
 Identities = 88/139 (63%), Positives = 106/139 (76%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
           LHPLVIMN+SEHWTR +AQ G P+ V GALIGKQKGRNIE+MNSFEL   +         
Sbjct: 56  LHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK 115

Query: 457 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGD 636
            YYN KE+Q+KQVFSD+DF+GWYTTGD P+  DI + RQI  INECP+ML LNP  R+ D
Sbjct: 116 DYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAAINECPIMLQLNPLSRSVD 175

Query: 637 QLPVVLYESVIDVVNGRAT 693
            LP+ L+ES+ID+V+G AT
Sbjct: 176 HLPLKLFESLIDLVDGEAT 194


>AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA
           protein.
          Length = 341

 Score =  195 bits (476), Expect = 5e-50
 Identities = 88/139 (63%), Positives = 106/139 (76%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
           LHPLVIMN+SEHWTR +AQ G P+ V GALIGKQKGRNIE+MNSFEL   +         
Sbjct: 56  LHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK 115

Query: 457 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGD 636
            YYN KE+Q+KQVFSD+DF+GWYTTGD P+  DI + RQI  INECP+ML LNP  R+ D
Sbjct: 116 DYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAAINECPIMLQLNPLSRSVD 175

Query: 637 QLPVVLYESVIDVVNGRAT 693
            LP+ L+ES+ID+V+G AT
Sbjct: 176 HLPLKLFESLIDLVDGEAT 194


>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNI-EVMNSFELVFSMXXXXXXXX 453
           +HPLV+++V +H+ R+  + G  + VVG L+G  + + + +V NSF + F          
Sbjct: 13  VHPLVLLSVVDHFNRM-GKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVW 71

Query: 454 XXYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECP-VMLMLNPA 621
              ++  E     FK+V +    +GWY TG    + DIA++  +     CP  +L++  A
Sbjct: 72  FLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELV--RRYCPNSVLVIIDA 129

Query: 622 GRNGDQLPVVLYESVIDV-VNGRATNAT 702
                 LP   Y SV +V  +G  T+ T
Sbjct: 130 KPKDLGLPTEAYISVEEVHDDGSPTSKT 157


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNI-EVMNSFELVFSMXXXXXXXX 453
           +HPLV+++V +H+ R+  + G  + VVG L+G  + + + +V NSF + F          
Sbjct: 13  VHPLVLLSVVDHFNRM-GKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVW 71

Query: 454 XXYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECP-VMLMLNPA 621
              ++  E     FK+V +    +GWY TG    + DIA++  +     CP  +L++  A
Sbjct: 72  FLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELV--RRYCPNSVLVIIDA 129

Query: 622 GRNGDQLPVVLYESVIDV-VNGRATNAT 702
                 LP   Y SV +V  +G  T+ T
Sbjct: 130 KPKDLGLPTEAYISVEEVHDDGSPTSKT 157


>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score = 48.8 bits (111), Expect = 8e-06
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNI-EVMNSFELVFSMXXXXXXXX 453
           +HPLV+++V +H+ R+  + G  + VVG L+G  + + + +V N+F + F +        
Sbjct: 13  VHPLVLLSVVDHFNRM-GKIGNQKRVVGVLLGCWRSKGVLDVSNTFAVPFDVDDKDKSVW 71

Query: 454 XXYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVHRQI 576
              ++  E     FK+V +    +GWY TG    + DIA++  +
Sbjct: 72  FLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELV 115


>AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p
           protein.
          Length = 280

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 26/119 (21%), Positives = 48/119 (40%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
           +HP+V+  V + + R  A       V+G L+G      +EV N F +             
Sbjct: 10  VHPVVLFQVVDAFERRNADS---HRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAEL 66

Query: 457 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNG 633
            Y     +  ++V S+   +GW+ TG+  +     +H         PV L ++ + + G
Sbjct: 67  SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGG 125


>AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA
           protein.
          Length = 280

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 26/119 (21%), Positives = 48/119 (40%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 456
           +HP+V+  V + + R  A       V+G L+G      +EV N F +             
Sbjct: 10  VHPVVLFQVVDAFERRNADS---HRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAEL 66

Query: 457 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNG 633
            Y     +  ++V S+   +GW+ TG+  +     +H         PV L ++ + + G
Sbjct: 67  SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGG 125


>AE013599-160|AAF57273.2|  286|Drosophila melanogaster CG8335-PA
           protein.
          Length = 286

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
 Frame = +1

Query: 277 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFS--MXXXXXXX 450
           L PLV   + + + R    +G  Q V+G L+G+ K  +IE+ N F +             
Sbjct: 14  LKPLVFFQIIDAYDR--RPKGDNQ-VMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDL 70

Query: 451 XXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVH----RQICDINECPVMLMLNP 618
              Y +   E     + +   LGW+ TG + S     +H    R+ C+    P+ L+++ 
Sbjct: 71  DMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQ--PLHLLVDA 128

Query: 619 AGRNGDQLPVVLYESV 666
           A +N  +L   LY +V
Sbjct: 129 ALKN-QRLSTRLYCAV 143


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 163 SSGPPIEVPNPTSPAPTTPGS 225
           ++GP I  P+PTSP  TTP S
Sbjct: 238 TNGPSINAPSPTSPPTTTPPS 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,917,908
Number of Sequences: 53049
Number of extensions: 577421
Number of successful extensions: 2243
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2234
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)