Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18d21r
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075249-1|AAL68116.1|  430|Drosophila melanogaster AT21437p pro...    30   4.6  
AF125157-1|AAF20167.1|  420|Drosophila melanogaster tryptophanyl...    30   4.6  
AF125156-1|AAF20166.1|  430|Drosophila melanogaster tryptophanyl...    30   4.6  
AE014297-898|AAF54352.1|  430|Drosophila melanogaster CG9735-PB,...    30   4.6  
AE014297-897|AAG22136.1|  430|Drosophila melanogaster CG9735-PA,...    30   4.6  

>AY075249-1|AAL68116.1|  430|Drosophila melanogaster AT21437p
           protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 191 SGFPYSFLNSKFRCFFPCCTVNQHAQFSMTEGI 93
           S FP+ F N K  C  P C ++Q   F MT  +
Sbjct: 252 STFPFIFGNRKVHCLIP-CAIDQDPYFRMTRDV 283


>AF125157-1|AAF20167.1|  420|Drosophila melanogaster
           tryptophanyl-tRNA synthetase protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 191 SGFPYSFLNSKFRCFFPCCTVNQHAQFSMTEGI 93
           S FP+ F N K  C  P C ++Q   F MT  +
Sbjct: 242 STFPFIFGNRKVHCLIP-CAIDQDPYFRMTRDV 273


>AF125156-1|AAF20166.1|  430|Drosophila melanogaster
           tryptophanyl-tRNA synthetase protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 191 SGFPYSFLNSKFRCFFPCCTVNQHAQFSMTEGI 93
           S FP+ F N K  C  P C ++Q   F MT  +
Sbjct: 252 STFPFIFGNRKVHCLIP-CAIDQDPYFRMTRDV 283


>AE014297-898|AAF54352.1|  430|Drosophila melanogaster CG9735-PB,
           isoform B protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 191 SGFPYSFLNSKFRCFFPCCTVNQHAQFSMTEGI 93
           S FP+ F N K  C  P C ++Q   F MT  +
Sbjct: 252 STFPFIFGNRKVHCLIP-CAIDQDPYFRMTRDV 283


>AE014297-897|AAG22136.1|  430|Drosophila melanogaster CG9735-PA,
           isoform A protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 191 SGFPYSFLNSKFRCFFPCCTVNQHAQFSMTEGI 93
           S FP+ F N K  C  P C ++Q   F MT  +
Sbjct: 252 STFPFIFGNRKVHCLIP-CAIDQDPYFRMTRDV 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,154,099
Number of Sequences: 53049
Number of extensions: 643624
Number of successful extensions: 1190
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)