Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18d19r
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   0.37 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   2.7  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   8.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   8.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   8.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   8.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 694 LEYSSDFVFVYSLKSFY 644
           L Y++DF+   SL SFY
Sbjct: 337 LFYNTDFIIYSSLSSFY 353



 Score = 21.4 bits (43), Expect(2) = 0.37
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 568 FIYYNIFK 545
           F+YYNIFK
Sbjct: 361 FLYYNIFK 368


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 530 EDGGNFEYIVIYESSE 577
           +DGGNF  +VI E +E
Sbjct: 74  DDGGNFNEVVIREIAE 89


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 530 EDGGNFEYIVIYESSE 577
           +DGGNF  +V+ E +E
Sbjct: 74  DDGGNFNEVVVREIAE 89


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 586 WPGFGTFIYYNIFKITAI 533
           W GFG F   ++ K TAI
Sbjct: 267 WEGFGDFQPVHVHKQTAI 284


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 586 WPGFGTFIYYNIFKITAI 533
           W GFG F   ++ K TAI
Sbjct: 267 WEGFGDFQPVHVHKQTAI 284


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 613 KGHEVSVAYW 584
           KGH++S  YW
Sbjct: 540 KGHDISADYW 549


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 358 ISLFIGELQHEGQAQKAQSRRSTSRCGKCRRLRY 459
           +  F+ ELQ +       +  +TS    CRR RY
Sbjct: 73  LDTFLRELQADLAEASQPTSTTTSVTPSCRRQRY 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,926
Number of Sequences: 438
Number of extensions: 4186
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)