Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d19f
(747 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.33
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 4.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 4.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 4.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.3
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.3
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 5.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 7.0
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 9.3
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 9.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 621 NIHVSNTHTHNEFLTKSFTLPELHSALNSRRDTAFGLDNISY 496
++++S+THT++ L K ++ SA +S R +GL I +
Sbjct: 455 HLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRH 496
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSSWIQDFLNKFSSNPQSQVNFNI 616
NKT HNNN ++ N + + N + N ++ +NI
Sbjct: 320 NKTIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYNI 356
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +2
Query: 548 LCSSGKVKLLVRNSLCVCVFDTWILKLTCDW 640
+C GK L+ + C + W+L DW
Sbjct: 658 ICYLGKAYLMYAIAGSQCFINIWLLGSRLDW 688
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSSWIQDFLNKFSSNPQSQVNFN 619
NKT HNNN ++ N + N +++ + N N
Sbjct: 87 NKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNIN 122
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSSWIQDFLN 658
NKT HNNN + N + +N
Sbjct: 320 NKTIHNNNNYKNYNKKLYYNIIN 342
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 71 VNSSLVRTLWSTLLNAPTISRKTQTRNLLY 160
V+S V LW N P ++ +T R L Y
Sbjct: 491 VDSKAVSRLWGLHKNKPDMNYETMGRALRY 520
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSS 679
N T HNNN K + N++
Sbjct: 86 NNTIHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSS 679
N T HNNN K + N++
Sbjct: 86 NNTIHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSS 679
N T HNNN K + N++
Sbjct: 87 NNTIHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSS 679
N T HNNN K + N++
Sbjct: 87 NNTIHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSS 679
N T HNNN K + N++
Sbjct: 87 NNTIHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSS 679
N T HNNN K + N++
Sbjct: 87 NNTIHNNNYKYNYNNN 102
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 726 NKTYHNNNIKSSTNSSWIQDFLNKFSSNP 640
NKT HNNN ++ N+ + +N P
Sbjct: 309 NKTIHNNNNYNNYNNKKLYYNINYIEQIP 337
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -2
Query: 641 PSHRSISISMYQTHIHTMNFLLKVLLYLNY 552
P HR + I H+H L + YL Y
Sbjct: 62 PEHRDLPIYQSHHHLHHHQVLYQQSPYLMY 91
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 726 NKTYHNNNIKSSTN 685
NKT HNNN ++ N
Sbjct: 87 NKTIHNNNNYNNNN 100
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -1
Query: 636 SQVNFNIHVSNTHTHNEFLTKSFTL 562
++VNF++ +NE + K F +
Sbjct: 48 NEVNFDVEDEKPQRYNECILKQFNI 72
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -1
Query: 636 SQVNFNIHVSNTHTHNEFLTKSFTL 562
++VNF++ +NE + K F +
Sbjct: 48 NEVNFDVEDEKPQRYNECILKQFNI 72
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -2
Query: 710 TIILKALQIAVGYKIF*INFHQTPSHR 630
T++L L + V + +NF +HR
Sbjct: 306 TMVLVTLSVVVTIAVLNVNFRSPVTHR 332
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 499 IQNAKESLS*REKNVNSHIKPTLECI 422
I + KE EKN+N H T + +
Sbjct: 805 ISSRKEQKKSEEKNINDHCVTTEQSV 830
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 150 ICYMQMHYEYLSKDYSYFQQQKNLYGNQIDL 242
I +Q+ S +YF Q NLYG L
Sbjct: 869 IAQLQISSAEASDSGAYFCQASNLYGRDQQL 899
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 150 ICYMQMHYEYLSKDYSYFQQQKNLYGNQIDL 242
I +Q+ S +YF Q NLYG L
Sbjct: 865 IAQLQISSAEASDSGAYFCQASNLYGRDQQL 895
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,525
Number of Sequences: 438
Number of extensions: 4501
Number of successful extensions: 34
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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