Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d18r
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 342 2e-94
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 342 2e-94
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 342 2e-94
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 342 2e-94
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 342 2e-94
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 342 2e-94
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 341 3e-94
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 341 3e-94
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 341 3e-94
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 335 2e-92
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 320 5e-88
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 169 2e-42
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 161 5e-40
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 108 4e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 1e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 79 4e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 5.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 342 bits (841), Expect = 2e-94
Identities = 159/169 (94%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 342 bits (841), Expect = 2e-94
Identities = 159/169 (94%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 342 bits (841), Expect = 2e-94
Identities = 159/169 (94%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 342 bits (841), Expect = 2e-94
Identities = 159/169 (94%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 164 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 223
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 224 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 283
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 284 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 144 DYLMKILTERGYSFTTTAER 163
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 342 bits (841), Expect = 2e-94
Identities = 159/169 (94%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 194 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 253
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 254 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 313
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 314 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 174 DYLMKILTERGYSFTTTAER 193
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 342 bits (841), Expect = 2e-94
Identities = 159/169 (94%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 341 bits (839), Expect = 3e-94
Identities = 158/169 (93%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 341 bits (839), Expect = 3e-94
Identities = 158/169 (93%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 341 bits (839), Expect = 3e-94
Identities = 158/169 (93%), Positives = 166/169 (98%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 335 bits (824), Expect = 2e-92
Identities = 157/169 (92%), Positives = 165/169 (97%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSF 267
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
LGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+K
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMK 326
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DYLMKILTERGYSFTTTAER
Sbjct: 188 DYLMKILTERGYSFTTTAER 207
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 320 bits (787), Expect = 5e-88
Identities = 152/181 (83%), Positives = 163/181 (90%)
Frame = -1
Query: 761 RGVTRSPPPLRGEIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNER 582
RG T + R EIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNER
Sbjct: 196 RGYTFTTTAER-EIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNER 254
Query: 581 FRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 402
FRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQ
Sbjct: 255 FRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQ 314
Query: 401 KEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 222
KEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKC
Sbjct: 315 KEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 374
Query: 221 F 219
F
Sbjct: 375 F 375
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = -3
Query: 786 DYLMKILTERGYSFTTTAER 727
DY+MKILTERGY+FTTTAER
Sbjct: 187 DYMMKILTERGYTFTTTAER 206
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 169 bits (411), Expect = 2e-42
Identities = 81/169 (47%), Positives = 111/169 (65%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
EIVR++KE CY+ALD T + S++ SY LPD I I N FR PE LF+P
Sbjct: 211 EIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDL 265
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 366
+G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ K
Sbjct: 266 IGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGK 325
Query: 365 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
I+I A ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 326 IRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 161 bits (391), Expect = 5e-40
Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 13/173 (7%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 546
E VR +KEKLCY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP
Sbjct: 211 ETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHL 270
Query: 545 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL------ 384
+ +E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 271 INVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVL 330
Query: 383 -----APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 246
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 331 HGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = -1
Query: 626 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 462
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 461 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 291
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 290 FQQMWISKEEYDESGPGIVHRKC 222
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 108 bits (260), Expect = 4e-24
Identities = 54/170 (31%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Frame = -1
Query: 761 RGVTRSPPPLRGEIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIG 591
+G+ P+ I+R E+ YV D+++E + T SL+ P Q I
Sbjct: 370 KGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDID 429
Query: 590 NERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIAD 411
N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+
Sbjct: 430 NSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAE 489
Query: 410 RMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 261
++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 490 KLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 100 bits (239), Expect = 1e-21
Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 25/188 (13%)
Frame = -1
Query: 725 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCP 570
E+ + IKEK CYV D +E T K DG IT +G ERF P
Sbjct: 229 EVAKMIKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITKKPFNVDVGYERFLGP 286
Query: 569 EALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI 393
E F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++
Sbjct: 287 EIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDV 346
Query: 392 TALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 261
L+ P I +++I+ ++Y+VW GGS+LAS S F Q+ +K E
Sbjct: 347 KRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAE 406
Query: 260 YDESGPGI 237
Y E GP I
Sbjct: 407 YMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 79.0 bits (186), Expect = 4e-15
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV----------- 603
++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 201 VINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQI 260
Query: 602 --ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTM 429
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++
Sbjct: 261 PSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSC 320
Query: 428 YPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEY 258
+PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++
Sbjct: 321 FPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDW 376
Query: 257 DESGPGI 237
DE G +
Sbjct: 377 DERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 79.0 bits (186), Expect = 4e-15
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV----------- 603
++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 201 VINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQI 260
Query: 602 --ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTM 429
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++
Sbjct: 261 PSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSC 320
Query: 428 YPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEY 258
+PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++
Sbjct: 321 FPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDW 376
Query: 257 DESGPGI 237
DE G +
Sbjct: 377 DERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -1
Query: 512 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 348
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 347 PERK----YSVWIGGSILASL-STFQQMWISKEEY 258
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 525 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 382
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 426 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 328
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,976,798
Number of Sequences: 27780
Number of extensions: 321067
Number of successful extensions: 995
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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