Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d16r
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 90 2e-18
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 74 1e-13
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 45 6e-05
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 31 0.76
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 1.3
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 1.3
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 29 5.4
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 29 5.4
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 29 5.4
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 29 5.4
AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical ... 29 5.4
Z46794-7|CAA86777.1| 120|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical p... 28 9.4
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 9.4
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 89.8 bits (213), Expect = 2e-18
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Frame = -3
Query: 795 LFFLYVSAVSATDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAIL 616
L ++ V+A A R+ GG ++P+ AL N H CG SIL + ++
Sbjct: 9 LRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKA---HHCGASILDKTHLI 65
Query: 615 SAASCFYTGNNAHDAVLWRARVGSAYSNSGGTMYIISRITPHTSFSPTTRANDIAVLRTR 436
+AA CF + + ++ ++ + RI + + ++DIA+L
Sbjct: 66 TAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIF-SHDIAILEIP 124
Query: 435 F-NIQFVAGLVEAAGLVGRTYTFSNDQAVEAIGWGAVSSTDPVSSIQLRRTVIWVVDQQI 259
+ I+F + L + + ++ + GWG++ + +L+ +I ++++
Sbjct: 125 YPGIEFNE-YAQPICLPSKDFVYTPGRQCVVSGWGSMGLR---YAERLQAALIPIINRFD 180
Query: 258 CSNRYSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPIL---DNGAVV--GVFSWAEGCA 94
C N S++ +++ + C G+L+ G+ CQGD+G P ++GA V GV SW +GCA
Sbjct: 181 CVNS-SQIYSSMSRSAFCAGYLEGGI-DSCQGDSGGPFACRREDGAFVLAGVISWGDGCA 238
Query: 93 LGRYPGINTRLSPYLQWV 40
+ PGI T ++PYL W+
Sbjct: 239 QKKQPGIYTMVAPYLSWI 256
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 74.1 bits (174), Expect = 1e-13
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 5/239 (2%)
Frame = -3
Query: 741 IGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAHDAVLW 562
IGG P S+P+ LL+ G HRCGGS++ N +L+AA CF +
Sbjct: 59 IGGSESSP-HSWPWTVQLLSRLGH----HRCGGSLIDPNFVLTAAHCFAKDRR---PTSY 110
Query: 561 RARVGSAYSNSGGTMYIISRITPHTSFS-PTTRANDIAVLRTRFNIQFVAGLVEAAGLVG 385
RVG S S G+ + ++ ++ H ++ + D A++R V A +
Sbjct: 111 SVRVGGHRSGS-GSPHRVTAVSIHPWYNIGFPSSYDFAIMRIH---PPVNTSTTARPICL 166
Query: 384 RTYTFSNDQAVEAIGWGAVSSTDPVSSIQLRRTVIWVVDQQICSNRYSELGFTVASNMVC 205
+ ++ GWG+ +S+ LR + ++ CS+ + +G +M+C
Sbjct: 167 PSLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLC 226
Query: 204 LGWLDVGVRGQCQGDNGSPIL----DNGAVVGVFSWAEGCALGRYPGINTRLSPYLQWV 40
G+ G CQGD+G P++ + + GV SW GCA PG+ + W+
Sbjct: 227 AGY-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 45.2 bits (102), Expect = 6e-05
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 19/253 (7%)
Frame = -3
Query: 741 IGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAHDAVLW 562
IGG ++ ++ + G G+ CG +++ +++AA C +
Sbjct: 39 IGGNSIDDGANWMAKLVSYGDNGQGIL---CGATVIDDFWLVTAAHCALQLQTRSFVYVR 95
Query: 561 RARVGSAYSNSGGTMYIISRITPHTSFSPTTRANDIAVLRTRFNIQFVAGLVEAAGLVGR 382
+ S S YI H+ ++ T NDIA+LR ++ + G+ +
Sbjct: 96 EPKNNRERSFSVKEAYI------HSGYNNQTADNDIALLRISSDLSKL-GIKPVCLVHDD 148
Query: 381 TYTFSNDQAVEAIGWGAV----SSTDP--VSSIQLRRTVIWVVDQQICSNRY---SELGF 229
+ + IG+G SS +P ++S L+ T + ++ C + S L
Sbjct: 149 SKLLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSV 208
Query: 228 TVASNMVCLGWLDVGVRGQCQGDNGSPIL---DNGAVV--GVFSW-AEGCA----LGRYP 79
+ +C G + G GD+G P+L NG V G+ S+ A+G G++P
Sbjct: 209 KITGYQICAG---AYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFP 265
Query: 78 GINTRLSPYLQWV 40
G+ TR+S Y+ W+
Sbjct: 266 GVYTRISKYVPWI 278
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 735 GGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCF 598
G T P P+A + G F CGG+++T +L+AA CF
Sbjct: 34 GNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCF 79
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 77 PGYRPSAQPSAQENTPTTAPLSRIGLPLSP*HCPLTPTSS 196
P Y PS+ P +PT +P S P SP + P +PT S
Sbjct: 1666 PSYSPSS-PRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1704
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 77 PGYRPSAQPSAQENTPTTAPLSRIGLPLSP*HCPLTPTSS 196
P Y PS+ P +PT +P S P SP + P +PT S
Sbjct: 1673 PSYSPSS-PRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1711
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/72 (27%), Positives = 27/72 (37%)
Frame = +3
Query: 429 C*IWS*ERQCRWPGSWERS*CGA*CGL*CTSFLQNYCRLSQLWPATRPHRGHCFQYKNKK 608
C IW+ QCR + C CG+ +++ C A RG C KNK
Sbjct: 718 CPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECL--KNKW 775
Query: 609 LPTKLHFSLEYC 644
+P S C
Sbjct: 776 MPENCRRSCNTC 787
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 792 FFLYVSAVSATDDPS-QRIGGGTLVP-ITSYPFATALLNNPGSGVF 661
FF Y+ + S PS Q+ GG T++P TS P +T + GS V+
Sbjct: 412 FFFYMHSFSKWKHPSSQQAGGSTILPTTTSIPMSTT-SSGTGSPVY 456
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 792 FFLYVSAVSATDDPS-QRIGGGTLVP-ITSYPFATALLNNPGSGVF 661
FF Y+ + S PS Q+ GG T++P TS P +T + GS V+
Sbjct: 412 FFFYMHSFSKWKHPSSQQAGGSTILPTTTSIPMSTT-SSGTGSPVY 456
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 593 LETMPTMRSCGGPELAQPTVILEERCTS*AASRPTLASLPRPGPTTLPFSGPDST 429
L T+PT P L P ++ + PTL +LP P T P P +T
Sbjct: 207 LWTLPTQPPAWSPMLDSPIKPIQNSMFPTFPTMPTLPTLPTLAPFTFPTLPPPTT 261
>AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical
protein Y53G8AM.8 protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 GYRPSAQPSAQENTPTTAPLSRIG-LPLSP*HCPLTPTSSHPRQTMLLATV 229
G R +PSA+ PT+ P R G +P P T T TM A +
Sbjct: 20 GARSHKEPSAKRKKPTSTPTVRCGTVPQEPSTSAATVTQKPAGSTMATANI 70
>Z46794-7|CAA86777.1| 120|Caenorhabditis elegans Hypothetical
protein R06F6.7 protein.
Length = 120
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 391 KACSFDETSHELNVESGPENGNVVGPGRGREASVGRDAAYDVHR 522
+A + D T E+ + P++G ++GPG R G + YD+ +
Sbjct: 64 EAPNTDSTPVEILAAAKPDSGILLGPGDNRVKRDGLPSFYDIRK 107
>Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical
protein D1086.10a protein.
Length = 177
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -1
Query: 590 ETMPTMRSCGGPELAQPTVILEERCTS*AASRPTLASLPRPGPTTLPF----SGPDSTFS 423
E+ P+ +S P A T E+ + + S PT + PG T LPF + P S S
Sbjct: 42 ESSPS-QSTDSPSTASSTAT--EQIFTPSTSEPTSTTTTAPGTTELPFEWNVTAPPSVVS 98
Query: 422 SW 417
W
Sbjct: 99 KW 100
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +2
Query: 26 VAVDTTHCKYGESRVLMPGYRPSAQPSAQENT---PTTAPLS--RIGLPLSP*HCPLTPT 190
VA TT +Y E P R + T PTT L+ R PL+ P TP+
Sbjct: 253 VAPSTTTQRYIEPTTQRPTTRRATTKRITTTTTAAPTTPRLTTARATTPLATTSRPTTPS 312
Query: 191 SSHPRQTMLLAT 226
+ PR T LAT
Sbjct: 313 PTTPRATTPLAT 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,197,819
Number of Sequences: 27780
Number of extensions: 493137
Number of successful extensions: 1283
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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