Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18d15f
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           103   5e-24
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    61   3e-11
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.0  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   5.3  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   7.0  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  103 bits (247), Expect = 5e-24
 Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 127 QRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF-TKYIRLNSTEYEVKLVDTAGQ 303
           Q K+ ++G  +VGKSSL+++FV+GQF +  + TI   F T+ + ++ T  + ++ DTAGQ
Sbjct: 24  QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83

Query: 304 DEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDLH 483
           + Y      Y       ++VY I +S SF   +  + K L      ++ I L GNK DL 
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKT-WVKELQRQASPNIVIALAGNKADLA 142

Query: 484 LERKISTEEGKRLAEKWKAAFVETSAKRNESVTDMFHAILSEIERSDGHIPDKN 645
             R +  EE K+ A+  +  F+ETSAK   +V D+F AI  ++ +++G  P +N
Sbjct: 143 NSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGAGPQQN 196


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
 Frame = +1

Query: 133 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSTEYEVKLVDTAGQDEY 312
           K  ++G  +VGK+ ++I +    F   Y PT  + ++  + ++  +  + L DTAGQ++Y
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDY 67

Query: 313 S-IFPLQYSMDFHGYVLVYSITSSKSFQ-IVQIIYDKLLDMVGKIHVPIVLVGNKTDLHL 486
             + PL Y      +++ YS+ S  SF+ +    Y ++         PI+LVG K DL  
Sbjct: 68  DRLRPLSYPQT-DVFLICYSVASPSSFENVTSKWYPEIKHHCP--DAPIILVGTKIDLRE 124

Query: 487 ERK------------ISTEEGKRLAEKWKAA-FVETSAKRNESVTDMFHAILSEIERSD 624
           +R+            +  E+G++LA K +A  ++E SA     +  +F   L   E  +
Sbjct: 125 DRETISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEALCATEEKE 183


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 273 IFRRIQTNVLGECVLYCWVIRINKLAFHELYY 178
           I  ++QT  +G   L+ W+  I  +  H  YY
Sbjct: 126 IIAKVQTTCMGAVTLFYWIAPIPSICAH--YY 155


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   KKKRVSNNWKIRYFRILI 59
           +KK+ + NWKI   RIL+
Sbjct: 318 EKKKDTRNWKIILLRILV 335


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 135 LSLFRRHFYLKVTIQRFCKDKLNKVLLKF 49
           L L +  F   +++  +C+D+LN VL ++
Sbjct: 98  LFLQQPDFATLMSVATYCRDRLNPVLFQY 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,777
Number of Sequences: 2352
Number of extensions: 15058
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)