Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d13r
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 168 3e-42
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 159 1e-39
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 99 2e-21
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 68 8e-12
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 30 1.5
08_02_0944 + 22868885-22870387 29 2.7
06_02_0155 + 12380452-12381012 29 2.7
06_03_1259 - 28800954-28802468 29 3.5
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 3.5
04_03_0367 + 14970511-14970697,14970862-14970869 29 4.7
01_05_0270 - 20271859-20272866,20273043-20273058,20273455-202737... 29 4.7
11_06_0437 - 23533218-23536382 28 6.2
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936... 28 6.2
07_03_1649 - 28385289-28385358,28387039-28387877 28 6.2
03_02_0797 - 11296426-11297258,11297745-11297901 28 6.2
01_06_1430 - 37309737-37309946,37310049-37310100,37310348-373104... 28 8.1
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 168 bits (409), Expect = 3e-42
Identities = 79/145 (54%), Positives = 105/145 (72%)
Frame = -2
Query: 691 YGMGTSVDRXSASTEYYXRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMET 512
YGMGT+ R + S YY RGDYVPG+ VDGMDVLA ++A +FA E+ A GP+V+EM+T
Sbjct: 228 YGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHAIAN-GPIVLEMDT 286
Query: 511 YRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV 332
YRY GHSMSDPG++YRTRDE+ VRQ RDPI ++ IL H+L T +LKD++ ++RKEV
Sbjct: 287 YRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEV 346
Query: 331 DEATKQSKTEPEVGIEELSADIYYK 257
D+A ++K P EL ++Y K
Sbjct: 347 DDAIAKAKESPMPDTSELFTNVYVK 371
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 159 bits (387), Expect = 1e-39
Identities = 75/152 (49%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Frame = -2
Query: 691 YGMGTSVDRXSASTEYYXRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMET 512
YGMGT+ R S S YY RGDYVPG+ VDGMDVLA ++A +FA ++ GP+++EM+T
Sbjct: 236 YGMGTAEWRASKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKQHA-LENGPIILEMDT 294
Query: 511 YRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV 332
YRY GHSMSDPG++YRTRDE+ +RQ RDPI ++ +L H+ T +LKD++ ++RK+V
Sbjct: 295 YRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKDMEKEIRKQV 354
Query: 331 DEATKQSKTEPEVGIEELSADIYYKN--LEPF 242
D A ++K P EL ++Y + LE F
Sbjct: 355 DTAIAKAKESPMPDPSELFTNVYVNDCGLESF 386
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 99 bits (238), Expect = 2e-21
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = -2
Query: 691 YGMGTSVDRXSASTEYYXRGDY--VPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEM 518
+ +G S R ++ E Y +G +PGV VDGMDVL RE A+ AIE G+GP ++E
Sbjct: 255 WAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 314
Query: 517 ETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRK 338
ETYR+ GHS++DP R DE RDPIT+ K+ I+ L T +LK I+ K+
Sbjct: 315 ETYRFRGHSLADP-DELRRPDEKSHY-AARDPITALKKYIIEQNLATESELKSIEKKIDD 372
Query: 337 EVDEATKQSKTEP 299
V+EA + + P
Sbjct: 373 VVEEAVEFADASP 385
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 67.7 bits (158), Expect = 8e-12
Identities = 37/116 (31%), Positives = 60/116 (51%)
Frame = -2
Query: 610 VDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQT 431
VDG D LA A A E P+++E TYR HS SD T YR DE++ R
Sbjct: 379 VDGNDALAVYSAVHTAREMAIKEGRPILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTA 438
Query: 430 RDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 263
RDPI+ +++ + + + ++ VR+E+ +A + ++ P+ + EL D+Y
Sbjct: 439 RDPISRYRKWVQGNGWWCDEDESELRNNVRQELLKAIQVAERMPKPPLAELFTDVY 494
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 404 LLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRV 505
LL+ DG+SG+PHL +L +++ G + + +
Sbjct: 691 LLDSKDGLSGVPHLTNLNELLVKKCGEKENLMEI 724
>08_02_0944 + 22868885-22870387
Length = 500
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = -2
Query: 427 DPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLE 248
D IT+ E + L P ++ AKVR E+D A KT E I L Y + +
Sbjct: 301 DTITATVEWAMAELLRNPSEM----AKVRAEMDGALGGKKTVDEPDIARLP---YLQAVV 353
Query: 247 PFVRGIHPAAPL 212
+HPAAPL
Sbjct: 354 KEAMRLHPAAPL 365
>06_02_0155 + 12380452-12381012
Length = 186
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 424 GLWSASPPAPRLSSDTTCRGPTSNDQ 501
G A+PPAP S DT R PT D+
Sbjct: 50 GNGGAAPPAPATSPDTEVRAPTYGDK 75
>06_03_1259 - 28800954-28802468
Length = 504
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 401 LLLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRVTVRLHLHHQRTFPCVAVLD 562
+L++ +DG SG + L+ S+ G R T TVRLH HQ P ++ D
Sbjct: 54 ILIDEADGASGGANDLYDASQLY--LGARCLATAPTVRLHKPHQAPRPVASLPD 105
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 527 DGDGDVPLLWSFDVGPRHVVSDE 459
D DG VP W D R VVSD+
Sbjct: 148 DADGSVPFYWGVDPDSRLVVSDD 170
>04_03_0367 + 14970511-14970697,14970862-14970869
Length = 64
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 515 DVPLLWSFDVGPRHVVSDERRGAGGEADQR 426
D+PL W V P E RGAGG+ ++R
Sbjct: 11 DLPLAWPGRVDPPLAGLGEGRGAGGDEEER 40
>01_05_0270 -
20271859-20272866,20273043-20273058,20273455-20273756,
20273932-20274231
Length = 541
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 457 DEVQEVRQTRDPITSFKEKI-LNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEE 281
++ VR R T F E + ++ +++ +++K KE K + E GIE
Sbjct: 105 EQKPNVRYMRQITTKFSESMDISQQVIQQAHFVKMESKKEKEYFSVKKCQELAFECGIEH 164
Query: 280 LSADIY 263
SA++Y
Sbjct: 165 DSAEVY 170
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 388 ELVTPDQL-KDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPF 242
+LV P+ + +D+ RK VD K + ++ +E ADI +K EP+
Sbjct: 166 KLVEPNLVGRDVVHACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPY 215
>08_02_0274 -
15192670-15192983,15193110-15193200,15193295-15193603,
15193859-15193944,15196034-15196088,15196689-15196757,
15197027-15197074,15198090-15198203,15198464-15198526,
15199236-15199427,15199519-15199643,15199723-15199779,
15200209-15200332,15200478-15200543,15200656-15200738,
15200916-15201036,15201663-15201773,15201841-15201936,
15202032-15202107,15202878-15203016,15203283-15203346,
15203454-15203527,15203845-15203923,15204473-15204547
Length = 876
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 466 RTRDEVQEVRQTRDPITSFKEKILN-HELVTPDQLKDIDAKVR 341
RTRDE+ +V++ +D +T +K+ + E PD +I V+
Sbjct: 546 RTRDELMDVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVK 588
>07_03_1649 - 28385289-28385358,28387039-28387877
Length = 302
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 443 LLHLVSRPIRRAGVRHRMT-RVT-VRLHL 523
++HLVS P+ A V HR T R++ V LHL
Sbjct: 43 VVHLVSTPVNLAAVAHRRTDRISLVELHL 71
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 424 GLWSASPPAPRLSSDTTCRGPTSNDQSNGTSPS-PSPKD 537
G S PAP LSS T S D G PS P+ D
Sbjct: 206 GAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSWPTQAD 244
>01_06_1430 -
37309737-37309946,37310049-37310100,37310348-37310427,
37310538-37310606,37310710-37310843,37311173-37311332,
37311483-37311554,37312113-37312246,37312386-37312521,
37313273-37313416
Length = 396
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 457 DEVQEVRQTRDPITSFKEKILNHE---LVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 287
D RQ D + K +N E V PD+ +++A++ + +EATK+ + V
Sbjct: 288 DRANAFRQHHDLFQQKEYKGVNLEKLKFVNPDKFSELEAELTADSEEATKRFEHIVAVMN 347
Query: 286 EELS 275
EEL+
Sbjct: 348 EELA 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,558,157
Number of Sequences: 37544
Number of extensions: 364402
Number of successful extensions: 1603
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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