Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d13r
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 217 6e-57
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 217 6e-57
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 57 1e-08
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical ... 39 0.004
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 33 0.19
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 32 0.34
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 32 0.34
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 31 1.0
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 4.2
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 4.2
AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical ... 29 4.2
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 5.5
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 28 7.3
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 7.3
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 7.3
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 7.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 217 bits (530), Expect = 6e-57
Identities = 98/154 (63%), Positives = 123/154 (79%)
Frame = -2
Query: 694 GYGMGTSVDRXSASTEYYXRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEME 515
G+GMGT+ +R SASTEYY RGDYVPG+WVDGMD+LA REA ++A EYC++GKGPL+MEM
Sbjct: 237 GFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMA 296
Query: 514 TYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKE 335
TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++I+ L T ++LK ID +VRKE
Sbjct: 297 TYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKE 356
Query: 334 VDEATKQSKTEPEVGIEELSADIYYKNLEPFVRG 233
VDEA K + ++ + E L ADIY+ +RG
Sbjct: 357 VDEALKIATSDGVLPPEALYADIYHNTPAQEIRG 390
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 217 bits (530), Expect = 6e-57
Identities = 98/154 (63%), Positives = 123/154 (79%)
Frame = -2
Query: 694 GYGMGTSVDRXSASTEYYXRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEME 515
G+GMGT+ +R SASTEYY RGDYVPG+WVDGMD+LA REA ++A EYC++GKGPL+MEM
Sbjct: 220 GFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMA 279
Query: 514 TYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKE 335
TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++I+ L T ++LK ID +VRKE
Sbjct: 280 TYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKE 339
Query: 334 VDEATKQSKTEPEVGIEELSADIYYKNLEPFVRG 233
VDEA K + ++ + E L ADIY+ +RG
Sbjct: 340 VDEALKIATSDGVLPPEALYADIYHNTPAQEIRG 373
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/116 (31%), Positives = 55/116 (47%)
Frame = -2
Query: 610 VDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQT 431
VDG D+LA A + A + P+++E TYR HS SD T+YR+ DEVQ
Sbjct: 283 VDGNDLLAVYNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDK 341
Query: 430 RDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 263
PIT FK+ I ++ + +V+K V ++ + +L D+Y
Sbjct: 342 DHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDVY 397
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/116 (31%), Positives = 55/116 (47%)
Frame = -2
Query: 610 VDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQT 431
VDG D+LA A + A + P+++E TYR HS SD T+YR+ DEVQ
Sbjct: 282 VDGNDLLAVYNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDK 340
Query: 430 RDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 263
PIT FK+ I ++ + +V+K V ++ + +L D+Y
Sbjct: 341 DHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDVY 396
>AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical
protein M01D1.9 protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 397 LNH--ELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYK-NLEPFVRGIH 227
LNH +++P + V E DEA +S +E E + +Y+K ++PF + I+
Sbjct: 102 LNHFLSIISPSNIDLFHFPVYNEFDEAQFKSLSECLESHEIYNLHVYWKFEMDPFFKVIN 161
Query: 226 PAAPLKHLEVQPRNH 182
P KHL++ P H
Sbjct: 162 AFLPTKHLKIHPTFH 176
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/97 (20%), Positives = 44/97 (45%)
Frame = -2
Query: 598 DVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPI 419
D A A ++ K +++++ YR GH+ D + Q ++QT+ +
Sbjct: 483 DPEAVMHVCNVAADWRKTFKKDVIVDLVCYRRHGHNELDE-PMFTQPLMYQRIKQTKTAL 541
Query: 418 TSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSK 308
++EKILN + +K+ K +++A + ++
Sbjct: 542 EKYQEKILNEGVANEQYVKEELTKYGSILEDAYENAQ 578
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 418 TSFKEKILNHELVTPDQLKDIDAKV-RKEVDEATKQSKTEPEVGIEELSADIYYKNLE 248
TS +++N ++L++ +V K+V+ TKQ+K E E + + ++YYKNL+
Sbjct: 261 TSDLNEVVNALYEGFEELQEEKLRVLSKQVERKTKQAKVEEERKLIDQQNEVYYKNLK 318
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -2
Query: 442 VRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 263
+RQTR+ + + +L + K A ++KE + TK +K E I EL +
Sbjct: 361 IRQTRETLDIELQIMLKDSINPKSHAKTFAALLKKERETRTKHAKVFMEAKINELDMGNF 420
Query: 262 YKNLEPF 242
Y+ + F
Sbjct: 421 YETYDSF 427
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 464 DERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 327
D GG + R HHF Q + A++ RSA G+ RQ RR
Sbjct: 318 DSSLPTGGGSAIRVHHFKQNSRITPIAQNRRSAAGFDRQQIQEMRR 363
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -2
Query: 448 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 275
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 274 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 188
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -2
Query: 448 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 275
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 274 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 188
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical
protein Y67D8C.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 400 ILNHELVTP--DQLKDIDAKVRKEVDEATKQSKTEPE 296
I N + TP DQ+KDID+K +K + T + K EP+
Sbjct: 8 IENTHVTTPIIDQIKDIDSKNKKNIQ--TVREKNEPK 42
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -2
Query: 505 YSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHEL--VTPDQLKDIDAKVRKEV 332
YS DP YR +V +++ +PI F K N ++ + + + D+ + +V
Sbjct: 357 YSSLHFKDPEPLYRKTSKVMNLKELLNPIPYFLRKGCNTDMWDLFKVKTRKFDSTIGHDV 416
Query: 331 DEATKQSKTEPEVGIEELSADI 266
+ ++ + E L A++
Sbjct: 417 SDTEEEDEDEETERRNRLKAEL 438
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 301 PEVGIEELSADIYYKNLEPFVRGIHPAAPLKHLEVQ 194
P + I + IY+ N E FVR IH A L L V+
Sbjct: 560 PGIKIFRFDSPIYFGNSEMFVRKIHQACGLNPLIVR 595
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 679 TSVDRXSASTEYYXRGDYVPGVWVDG 602
+S DR A+ EY G+Y VW+DG
Sbjct: 192 SSEDRTRAAKEYGDVGNYQSYVWIDG 217
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 448 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 269
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 268 -IYYKNL 251
+YY ++
Sbjct: 634 RLYYVSM 640
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 448 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 269
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 268 -IYYKNL 251
+YY ++
Sbjct: 634 RLYYVSM 640
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 448 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 269
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 573 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 631
Query: 268 -IYYKNL 251
+YY ++
Sbjct: 632 RLYYVSM 638
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -2
Query: 409 KEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEP 245
KE+ E+ ++ + D + +KE ++ ++ K E EV EE S + K LEP
Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV--EEKSEKVEEKELEP 375
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 460 SSDTTCRGPTSN-DQSNGTSPSPSP 531
S T RG + N +QSN TSP P P
Sbjct: 494 SKPNTARGSSGNINQSNTTSPEPEP 518
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 460 SSDTTCRGPTSN-DQSNGTSPSPSP 531
S T RG + N +QSN TSP P P
Sbjct: 494 SKPNTARGSSGNINQSNTTSPEPEP 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,519,959
Number of Sequences: 27780
Number of extensions: 296970
Number of successful extensions: 1361
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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