Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d13f
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 242 2e-64
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 240 7e-64
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 40 0.001
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 31 0.88
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 1.2
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 30 2.0
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 30 2.0
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 29 2.7
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 29 2.7
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 29 2.7
AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical ... 29 2.7
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 3.5
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 29 3.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.5
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 4.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 6.2
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical p... 28 8.2
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 8.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.2
AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 242 bits (593), Expect = 2e-64
Identities = 116/191 (60%), Positives = 135/191 (70%)
Frame = +3
Query: 180 SAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALK 359
S A L + +TA + T E +F KP KLHKLD GP TS TL EDALK
Sbjct: 15 STAMSLFARQLQSLTASGIRTQQVRLASTEVSFHTKPCKLHKLDNGPNTSVTLNREDALK 74
Query: 360 LYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGW 539
Y + ++RR+E+A+GNLYKEK IRGFCHLYSGQEA AVGM+AAM + D+VITAYRCHGW
Sbjct: 75 YYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVITAYRCHGW 134
Query: 540 TYLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKY 719
T+L+G +V VL+ELTGR G GKGGSMH+Y +NFYGGNGIVGAQ PLGAGVA A KY
Sbjct: 135 TWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTKNFYGGNGIVGAQQPLGAGVALAMKY 194
Query: 720 RADGGVTFALY 752
R V LY
Sbjct: 195 REQKNVCVTLY 205
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 240 bits (588), Expect = 7e-64
Identities = 114/186 (61%), Positives = 133/186 (71%)
Frame = +3
Query: 195 LAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQL 374
L + +TA + T E +F KP KLHKLD GP TS TL EDALK Y +
Sbjct: 3 LFARQLQSLTASGIRTQQVRLASTEVSFHTKPCKLHKLDNGPNTSVTLNREDALKYYRDM 62
Query: 375 TILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMG 554
++RR+E+A+GNLYKEK IRGFCHLYSGQEA AVGM+AAM + D+VITAYRCHGWT+L+G
Sbjct: 63 QVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVITAYRCHGWTWLLG 122
Query: 555 VSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYRADGG 734
+V VL+ELTGR G GKGGSMH+Y +NFYGGNGIVGAQ PLGAGVA A KYR
Sbjct: 123 ATVTEVLAELTGRVAGNVHGKGGSMHMYTKNFYGGNGIVGAQQPLGAGVALAMKYREQKN 182
Query: 735 VTFALY 752
V LY
Sbjct: 183 VCVTLY 188
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Frame = +3
Query: 345 EDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAY 524
+ +LK+Y+ +T L ++ + ++ I + + G+E VG AA+ D + Y
Sbjct: 84 QTSLKMYKTMTQLNIMDRILYDSQRQGRISFYMTSF-GEEGNHVGSAAALEPQDLIYGQY 142
Query: 525 RCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHL--YGRNFYGGNGIVGAQVPLGAG 698
R G G ++ +++ G +G+ MH RNF + + Q+P G
Sbjct: 143 REAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVG 202
Query: 699 VAFAHKYRADGGVTFALY 752
A+A K + D +Y
Sbjct: 203 SAYAFKQQKDNNRIAVVY 220
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Frame = +3
Query: 345 EDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAY 524
+ +LK+Y+ +T L ++ + ++ I + + G+E VG AA+ D + Y
Sbjct: 83 QTSLKMYKTMTQLNIMDRILYDSQRQGRISFYMTSF-GEEGNHVGSAAALEPQDLIYGQY 141
Query: 525 RCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHL--YGRNFYGGNGIVGAQVPLGAG 698
R G G ++ +++ G +G+ MH RNF + + Q+P G
Sbjct: 142 REAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVG 201
Query: 699 VAFAHKYRADGGVTFALY 752
A+A K + D +Y
Sbjct: 202 SAYAFKQQKDNNRIAVVY 219
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 156 DKMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPAT 326
+K+S + S K L +TKV+A N K + TF + +L +L++GP+T
Sbjct: 579 EKISNITISKTKPLK-KAVTKVSAAKKILNKKLKVNTKKTFGAEDDELEELEEGPST 634
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 667 IPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 566
+P P PY C PP P PV P + + P
Sbjct: 109 VPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPP 142
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = -1
Query: 691 PNGTCAPTIPLPP*KLRPYKCMEPPLP---REQPVLRPVSSESTPSTLTPMR 545
P AP P P PY C PP P QPV++ V P+R
Sbjct: 118 PYACAAPPCPPPTPVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPVPIR 169
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 688 NGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVS-SESTPST 560
+ T +P PP + P P PR +P+ +P S S +TP T
Sbjct: 110 DATVKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRT 153
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 29.9 bits (64), Expect = 2.0
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Frame = +3
Query: 159 KMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQ-GPATSAT 335
+ S + P +A + K +AP ++ KKE TFE K L Q A S
Sbjct: 372 RASSVAPQSAPIAPTPKVAKSSAPKEPKESRKEHKKETTFEASGAKSEDLMQINNALSMI 431
Query: 336 LTSEDALK--------LYEQLT-ILRRIETASGNLYKEKII---RGFCHLYSGQEA-VAV 476
E+ LK + ++LT + R E + EK+I R C GQ A +
Sbjct: 432 REREEKLKAELAAAQAIKDKLTSVKNRREDNPNEPFPEKLINETRALCTTQVGQNASSSS 491
Query: 477 GMRAAMRDADSVITA-YRCHGWTY 545
AA+R+ S A R +G+ +
Sbjct: 492 ASSAALRNGRSKKAASARLYGYEF 515
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 29.9 bits (64), Expect = 2.0
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Frame = +3
Query: 159 KMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQ-GPATSAT 335
+ S + P +A + K +AP ++ KKE TFE K L Q A S
Sbjct: 372 RASSVAPQSAPIAPTPKVAKSSAPKEPKESRKEHKKETTFEASGAKSEDLMQINNALSMI 431
Query: 336 LTSEDALK--------LYEQLT-ILRRIETASGNLYKEKII---RGFCHLYSGQEA-VAV 476
E+ LK + ++LT + R E + EK+I R C GQ A +
Sbjct: 432 REREEKLKAELAAAQAIKDKLTSVKNRREDNPNEPFPEKLINETRALCTTQVGQNASSSS 491
Query: 477 GMRAAMRDADSVITA-YRCHGWTY 545
AA+R+ S A R +G+ +
Sbjct: 492 ASSAALRNGRSKKAASARLYGYEF 515
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 375 TILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADS 509
T+ RRIET + K+ R LY+G E A G + + DAD+
Sbjct: 171 TLERRIETEKETIDIFKMTRESLGLYAGIEGGATGSKLVIIDADT 215
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = -3
Query: 695 SSQRDLRTNNPVATIEVASVQMHGTSLAPGATGPAPRQLREHPQHTNAHEISPSVTTIRG 516
++Q+ T P T + T+++P +T P P Q+ ++ Q+ + V +
Sbjct: 196 TAQQSTTTTTPTTTSTTTASPDGSTTISPSSTTPTPEQVLQNIQYPDGSRPKNIVWACKA 255
Query: 515 DY*VCISHRC 486
VC C
Sbjct: 256 GREVCCGTDC 265
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = -3
Query: 695 SSQRDLRTNNPVATIEVASVQMHGTSLAPGATGPAPRQLREHPQHTNAHEISPSVTTIRG 516
++Q+ T P T + T+++P +T P P Q+ ++ Q+ + V +
Sbjct: 196 TAQQSTTTTTPTTTSTTTASPDGSTTISPSSTTPTPEQVLQNIQYPDGSRPKNIVWACKA 255
Query: 515 DY*VCISHRC 486
VC C
Sbjct: 256 GREVCCGTDC 265
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = -3
Query: 695 SSQRDLRTNNPVATIEVASVQMHGTSLAPGATGPAPRQLREHPQHTNAHEISPSVTTIRG 516
++Q+ T P T + T+++P +T P P Q+ ++ Q+ + V +
Sbjct: 196 TAQQSTTTTTPTTTSTTTASPDGSTTISPSSTTPTPEQVLQNIQYPDGSRPKNIVWACKA 255
Query: 515 DY*VCISHRC 486
VC C
Sbjct: 256 GREVCCGTDC 265
>AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical
protein Y57G7A.5 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 300 HKLDQGPATSATLTSE--DALKLYEQLTILRRIETASGNLYK-EKIIRGFCHLY 452
H LD+ L+ E D L ++ ++ R ETA GN+Y EK +R HLY
Sbjct: 50 HVLDEQTRLRTRLSEEFGDFLNRSKR-SLTRNFETADGNVYSFEKNLRELLHLY 102
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -1
Query: 706 KATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTL 557
KA P P G CAP +P P + RP PP PVL PV + +T L
Sbjct: 386 KADPCPGGFCAP-VPQAPQQERP----TPP-----PVLAPVINTATQPPL 425
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 667 IPLPP*KLRPYKCMEPPLPREQPVLRPVS-SESTPST 560
+P PP + P P PR +P+ +P S S +TP T
Sbjct: 115 VPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRT 151
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 640 PYKCMEPPLPREQPVL--RPVSSESTPSTLTPMR*VHP*QRYAVITESASRIAALIPTAT 467
P K +PPLP+ P++ P S PST+T V P A S PT T
Sbjct: 693 PEKIDKPPLPQAAPIIPKLPQKSIKAPSTVTTRSKVPP-PTAAAAVRIVSVTTTTTPTKT 751
Query: 466 A 464
A
Sbjct: 752 A 752
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 646 LRPYKCMEPPLPREQPVLRPVSSESTPSTLTPM 548
+ P + PP+P PV+ PV S T + PM
Sbjct: 229 ISPSTRVPPPIPSRAPVMSPVQSPLTHPPVAPM 261
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 646 LRPYKCMEPPLPREQPVLRPVSSESTPSTLTPM 548
+ P + PP+P PV+ PV S T + PM
Sbjct: 229 ISPSTRVPPPIPSRAPVMSPVQSPLTHPPVAPM 261
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -1
Query: 697 PAPNGTCAPT-IPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMR*VHP*QRY 521
P P CAP +P PP + P + PP P P P P PM P Q Y
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPP-PMCPPPPPPPPPPMCPPPPPPMPSYSPCQSY 90
Query: 520 A 518
A
Sbjct: 91 A 91
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 281 FECRLF-FRAVFCVCRYNRCSHFRDCVSG 198
++C + + +V C+ Y RC + DC G
Sbjct: 97 WQCDTYTWHSVSCIAEYQRCDNITDCADG 125
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical
protein R06C7.8 protein.
Length = 987
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 209 NHESDCTGCSDKRKIQHEKRGDI 277
N+ES+ TGC +R+ + K+GDI
Sbjct: 624 NNESEITGCKIRRRSEIIKQGDI 646
>Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 195 LAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQL 374
+AG T K AT AK++ E EIK + K D+G + + L + L Q+
Sbjct: 351 IAGVTNGKADYKKFATPAKWTVLSEILREIKMLPVEKKDRGNDSPSVLVITSSEDLSRQV 410
Query: 375 T 377
T
Sbjct: 411 T 411
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 754 PYRANVTPPSARYLWAKATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPRE 605
PY A PP + A P+ AP PLP Y PPLP++
Sbjct: 57 PYGATYAPPPPMGIGAGVNPSGYVQQAP--PLPTQGYSAYNQQPPPLPQQ 104
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 281 FECRLF-FRAVFCVCRYNRCSHFRDCVSG 198
++C + + +V C+ Y RC + DC G
Sbjct: 97 WQCDTYTWHSVSCIAEYQRCDNITDCADG 125
>AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 195 LAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQL 374
+AG T K AT AK++ E EIK + K D+G + + L + L Q+
Sbjct: 351 IAGVTNGKADYKKFATPAKWTVLSEILREIKMLPVEKKDRGNDSPSVLVITSSEDLSRQV 410
Query: 375 T 377
T
Sbjct: 411 T 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,259,231
Number of Sequences: 27780
Number of extensions: 375935
Number of successful extensions: 1280
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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