Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18d12f
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      88   2e-19
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.3  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    24   5.8  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
 Frame = +1

Query: 232 SRGLRCECAGARACPDGSSNGTCVTQVGGYCFVAVEEVLD-ESGSVVLDRTAGCLSADE- 405
           +R L C C G   CP    NGTC T+ GG CFV+VE VLD E+  +V + + GC+S ++ 
Sbjct: 69  ARVLTCYCEGH--CPGNLQNGTCETRPGGSCFVSVEAVLDEETKQLVPEYSHGCMSPEQG 126

Query: 406 SGLMQCKSSQV-PHQHPKVIECCYDDDLCNLRLHPQLSEPSPDVTESPGVRPP 561
            GL+QCK   V P  H K I CC ++DLCN  L P  S P    T  P +  P
Sbjct: 127 GGLLQCKVGTVSPQLHGKSIVCCDNEDLCNQDLQPPYS-PRTTTTPEPPLADP 178


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -2

Query: 175 LNITRNAAVCRRLY-----FYTTKIKTGQSQRTDFSGYV 74
           +++T  +AV  RLY       TTK K   S R+DFS  V
Sbjct: 599 IDVTGCSAVSLRLYEPLEGAITTKFKVQWSSRSDFSNVV 637


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 418 QCKSSQVPHQHPKVIECCYDDDLCNLRLHPQLSEPSPDVTESP 546
           QC    V H    +I+  +  D CN  L    +EP    T  P
Sbjct: 23  QCTDGVVSHSGANIIDIRHPLDDCNDHLMQCCAEPKQATTIPP 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,546
Number of Sequences: 2352
Number of extensions: 12345
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)