Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18d05r
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119241-1|AAM51101.1|  293|Drosophila melanogaster SD19581p pro...   276   3e-74
AE014297-3132|AAF55978.1|  293|Drosophila melanogaster CG5380-PA...   276   3e-74
AE014296-2148|AAF49912.1|  317|Drosophila melanogaster CG10638-P...    35   0.13 
AY089674-1|AAL90412.1|  317|Drosophila melanogaster RH46018p pro...    35   0.17 
U02491-1|AAA20216.1|  623|Drosophila melanogaster dsh protein.         31   1.6  
L26974-1|AAA16535.1|  623|Drosophila melanogaster dsh protein.         31   1.6  
BT023781-1|AAZ41790.1|  623|Drosophila melanogaster LD20984p pro...    31   1.6  
AE014298-1598|AAN09293.1|  601|Drosophila melanogaster CG18361-P...    31   1.6  
AE014298-1597|AAF48033.1|  623|Drosophila melanogaster CG18361-P...    31   1.6  
AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p pro...    31   2.8  
AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA...    31   2.8  

>AY119241-1|AAM51101.1|  293|Drosophila melanogaster SD19581p
           protein.
          Length = 293

 Score =  276 bits (676), Expect = 3e-74
 Identities = 131/224 (58%), Positives = 158/224 (70%)
 Frame = -2

Query: 801 STQSKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKC 622
           S   K ADNEEKVVY ++EE GNKGIWIRDIR++SNL   QL K+LKNLE+KK+IKAVK 
Sbjct: 70  SALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKS 129

Query: 621 VNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRADNMRNNPRG 442
           VNASKKKVYMLYNLEPD S+TGGAWYQDQDFE EFVDVLN QC RFL  + D+      G
Sbjct: 130 VNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREG 189

Query: 441 PVFGRTQAYATATEVQKYITDLGISKXXXXXXXXXXXXXXXVYDGKVEKSVFPDGSNVYR 262
           P+  +  +  T  EVQK+I+DLGISK               VYDG  E+    DGS VYR
Sbjct: 190 PLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYR 249

Query: 261 AIETLIPSSGLVQVPCGICPLIQRCNSSGLITPQVCNYMTEWLE 130
           A+   +P +GLVQ+PCGICP+I+ C++ G +T   C YM +WL+
Sbjct: 250 AVNAPLPPTGLVQMPCGICPVIKNCSNCGDVTAITCEYMRDWLD 293


>AE014297-3132|AAF55978.1|  293|Drosophila melanogaster CG5380-PA
           protein.
          Length = 293

 Score =  276 bits (676), Expect = 3e-74
 Identities = 131/224 (58%), Positives = 158/224 (70%)
 Frame = -2

Query: 801 STQSKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKC 622
           S   K ADNEEKVVY ++EE GNKGIWIRDIR++SNL   QL K+LKNLE+KK+IKAVK 
Sbjct: 70  SALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKS 129

Query: 621 VNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRADNMRNNPRG 442
           VNASKKKVYMLYNLEPD S+TGGAWYQDQDFE EFVDVLN QC RFL  + D+      G
Sbjct: 130 VNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREG 189

Query: 441 PVFGRTQAYATATEVQKYITDLGISKXXXXXXXXXXXXXXXVYDGKVEKSVFPDGSNVYR 262
           P+  +  +  T  EVQK+I+DLGISK               VYDG  E+    DGS VYR
Sbjct: 190 PLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYR 249

Query: 261 AIETLIPSSGLVQVPCGICPLIQRCNSSGLITPQVCNYMTEWLE 130
           A+   +P +GLVQ+PCGICP+I+ C++ G +T   C YM +WL+
Sbjct: 250 AVNAPLPPTGLVQMPCGICPVIKNCSNCGDVTAITCEYMRDWLD 293


>AE014296-2148|AAF49912.1|  317|Drosophila melanogaster CG10638-PA,
           isoform A protein.
          Length = 317

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = -2

Query: 759 YNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNL 580
           Y  +E+    G+ +R I + SN  + QL +VL N E K V   V+C  A  +K    +  
Sbjct: 146 YKAMEKLVKLGL-VRSIGV-SNFNSEQLARVLANCEIKPVTNQVECSPALNQKALTAFCK 203

Query: 579 EPDRSLTG 556
           + D +LTG
Sbjct: 204 KNDVTLTG 211


>AY089674-1|AAL90412.1|  317|Drosophila melanogaster RH46018p
           protein.
          Length = 317

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = -2

Query: 759 YNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNL 580
           Y  +E+    G+ +R I + SN  + QL +VL N E K V   V+C  A  +K    +  
Sbjct: 146 YKAMEKLVKLGL-VRGIGV-SNFNSEQLARVLANCEIKPVTNQVECSPALNQKALTAFCK 203

Query: 579 EPDRSLTG 556
           + D +LTG
Sbjct: 204 KNDVTLTG 211


>U02491-1|AAA20216.1|  623|Drosophila melanogaster dsh protein.
          Length = 623

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -2

Query: 744 EAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKK-VIKAV--KCVNASKKKVYMLYNLEP 574
           E G+  + + D+    N+ N +  +VL+ +  K   IK V  KC + + K  + +   EP
Sbjct: 297 EPGDMILQVNDVNFE-NMTNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEP 355

Query: 573 DRSLTGGAW 547
            R +  GAW
Sbjct: 356 VRPIDPGAW 364


>L26974-1|AAA16535.1|  623|Drosophila melanogaster dsh protein.
          Length = 623

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -2

Query: 744 EAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKK-VIKAV--KCVNASKKKVYMLYNLEP 574
           E G+  + + D+    N+ N +  +VL+ +  K   IK V  KC + + K  + +   EP
Sbjct: 297 EPGDMILQVNDVNFE-NMTNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEP 355

Query: 573 DRSLTGGAW 547
            R +  GAW
Sbjct: 356 VRPIDPGAW 364


>BT023781-1|AAZ41790.1|  623|Drosophila melanogaster LD20984p
           protein.
          Length = 623

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -2

Query: 744 EAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKK-VIKAV--KCVNASKKKVYMLYNLEP 574
           E G+  + + D+    N+ N +  +VL+ +  K   IK V  KC + + K  + +   EP
Sbjct: 297 EPGDMILQVNDVNFE-NMTNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEP 355

Query: 573 DRSLTGGAW 547
            R +  GAW
Sbjct: 356 VRPIDPGAW 364


>AE014298-1598|AAN09293.1|  601|Drosophila melanogaster CG18361-PB,
           isoform B protein.
          Length = 601

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -2

Query: 744 EAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKK-VIKAV--KCVNASKKKVYMLYNLEP 574
           E G+  + + D+    N+ N +  +VL+ +  K   IK V  KC + + K  + +   EP
Sbjct: 275 EPGDMILQVNDVNFE-NMTNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEP 333

Query: 573 DRSLTGGAW 547
            R +  GAW
Sbjct: 334 VRPIDPGAW 342


>AE014298-1597|AAF48033.1|  623|Drosophila melanogaster CG18361-PA,
           isoform A protein.
          Length = 623

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -2

Query: 744 EAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKK-VIKAV--KCVNASKKKVYMLYNLEP 574
           E G+  + + D+    N+ N +  +VL+ +  K   IK V  KC + + K  + +   EP
Sbjct: 297 EPGDMILQVNDVNFE-NMTNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEP 355

Query: 573 DRSLTGGAW 547
            R +  GAW
Sbjct: 356 VRPIDPGAW 364


>AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p protein.
          Length = 1405

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -2

Query: 804  ISTQSKGADNEEKVVYNLIEE-AGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAV 628
            +  Q  G    +  +YN+ +  A  K + + DI   SNL+ T L  +L  L   + + AV
Sbjct: 1263 VGVQLAGCGLNDAHMYNISQHLAKAKQLQMLDISDNSNLSGTTLGYILDELPQLRDLLAV 1322

Query: 627  KCVN 616
             C N
Sbjct: 1323 NCTN 1326


>AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA
            protein.
          Length = 1405

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -2

Query: 804  ISTQSKGADNEEKVVYNLIEE-AGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAV 628
            +  Q  G    +  +YN+ +  A  K + + DI   SNL+ T L  +L  L   + + AV
Sbjct: 1263 VGVQLAGCGLNDAHMYNISQHLAKAKQLQMLDISDNSNLSGTTLGYILDELPQLRDLLAV 1322

Query: 627  KCVN 616
             C N
Sbjct: 1323 NCTN 1326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,894,568
Number of Sequences: 53049
Number of extensions: 625708
Number of successful extensions: 1246
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)