Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d05f
(781 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H1D9 Cluster: DNA-directed RNA polymerase III subunit... 247 2e-64
UniRef50_Q9VD25 Cluster: Probable DNA-directed RNA polymerase II... 237 2e-61
UniRef50_Q05DB8 Cluster: POLR3F protein; n=14; Eumetazoa|Rep: PO... 233 5e-60
UniRef50_Q00SN1 Cluster: RNA polymerase III, subunit C34; n=2; O... 148 2e-34
UniRef50_P91529 Cluster: Probable DNA-directed RNA polymerase II... 134 2e-30
UniRef50_Q55A81 Cluster: RNA polymerase III subunit; n=2; Dictyo... 132 1e-29
UniRef50_O94553 Cluster: Probable DNA-directed RNA polymerase II... 126 5e-28
UniRef50_Q8SR78 Cluster: DNA-DIRECTED RNA POLYMERASE III 34kDa S... 115 1e-24
UniRef50_P32910 Cluster: DNA-directed RNA polymerase III subunit... 115 1e-24
UniRef50_Q5DD86 Cluster: SJCHGC02354 protein; n=1; Schistosoma j... 109 1e-22
UniRef50_Q6C2B2 Cluster: Yarrowia lipolytica chromosome F of str... 107 2e-22
UniRef50_A5DFJ9 Cluster: Putative uncharacterized protein; n=1; ... 103 4e-21
UniRef50_Q4P0N2 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_Q6BYX4 Cluster: Debaryomyces hansenii chromosome A of s... 100 5e-20
UniRef50_A2E408 Cluster: RNA polymerase Rpc34 subunit family pro... 96 8e-19
UniRef50_A6RMR9 Cluster: Putative uncharacterized protein; n=2; ... 96 8e-19
UniRef50_Q0V6A9 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_A7QIQ1 Cluster: Chromosome chr9 scaffold_104, whole gen... 93 5e-18
UniRef50_Q5CWL5 Cluster: RNA polymerase III C34 subunit; rpc34p ... 85 2e-15
UniRef50_A2QYC8 Cluster: Catalytic activity: Nucleoside triphosp... 85 2e-15
UniRef50_UPI000023E625 Cluster: hypothetical protein FG00778.1; ... 84 4e-15
UniRef50_Q8ILN6 Cluster: RNA polymerase subunit, putative; n=5; ... 81 2e-14
UniRef50_A7ASE8 Cluster: RNA polymerase rpc34 subunit containing... 81 4e-14
UniRef50_UPI0000DC13E3 Cluster: UPI0000DC13E3 related cluster; n... 76 9e-13
UniRef50_Q2HEQ1 Cluster: Putative uncharacterized protein; n=3; ... 73 8e-12
UniRef50_Q4UHI1 Cluster: DNA-directed RNA polymerase III (-speci... 67 5e-10
UniRef50_UPI00006CEB60 Cluster: RNA polymerase Rpc34 subunit fam... 66 7e-10
UniRef50_Q4FXS2 Cluster: Putative uncharacterized protein; n=3; ... 63 7e-09
UniRef50_Q5KEY6 Cluster: DNA-directed RNA polymerase iii 34 kDa ... 62 2e-08
UniRef50_Q4CQY6 Cluster: Putative uncharacterized protein; n=3; ... 52 2e-05
UniRef50_Q9LSZ5 Cluster: Genomic DNA, chromosome 5, P1 clone:MQM... 51 3e-05
UniRef50_Q11V51 Cluster: DNA processing protein; n=1; Cytophaga ... 40 0.070
UniRef50_O34141 Cluster: HsdR; n=12; Bacteria|Rep: HsdR - Klebsi... 39 0.16
UniRef50_A6DQ23 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_Q54CP1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_Q4J6M9 Cluster: Conserved protein; n=2; Sulfolobus|Rep:... 38 0.37
UniRef50_Q4J948 Cluster: Conserved Crenarchaeal protein; n=3; Su... 37 0.49
UniRef50_Q22TK4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.65
UniRef50_Q97NY8 Cluster: Transcriptional regulator, MarR family;... 36 1.1
UniRef50_A4W305 Cluster: Leucine-rich repeat (LRR) protein; n=5;... 36 1.1
UniRef50_Q239Z6 Cluster: Cyclic nucleotide-binding domain contai... 36 1.1
UniRef50_Q1NLA7 Cluster: DsrD protein; n=3; Deltaproteobacteria|... 35 2.0
UniRef50_Q23AQ5 Cluster: Cation channel family protein; n=7; Euk... 35 2.0
UniRef50_A0CR29 Cluster: Chromosome undetermined scaffold_25, wh... 35 2.0
UniRef50_Q0DB47 Cluster: Os06g0603400 protein; n=1; Oryza sativa... 35 2.6
UniRef50_Q8V317 Cluster: Polymerase protein; n=2; unclassified R... 34 3.5
UniRef50_A5N965 Cluster: Transcriptional regulator; n=1; Clostri... 34 3.5
UniRef50_Q0PC85 Cluster: Putative flagellar hook-length control ... 34 4.6
UniRef50_A6DA49 Cluster: Acriflavin resistance protein; n=1; Cam... 33 6.1
UniRef50_UPI00015971CA Cluster: DctS; n=1; Bacillus amyloliquefa... 33 8.0
UniRef50_A5N1R7 Cluster: Predicted transcriptional regulator; n=... 33 8.0
UniRef50_A7PS02 Cluster: Chromosome chr14 scaffold_27, whole gen... 33 8.0
UniRef50_Q7RF86 Cluster: GYF domain, putative; n=6; Plasmodium (... 33 8.0
UniRef50_A1RX49 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q9H1D9 Cluster: DNA-directed RNA polymerase III subunit
RPC6; n=17; Amniota|Rep: DNA-directed RNA polymerase III
subunit RPC6 - Homo sapiens (Human)
Length = 316
Score = 247 bits (605), Expect = 2e-64
Identities = 118/236 (50%), Positives = 157/236 (66%)
Frame = +2
Query: 74 PKMSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNG 253
P + + +I+ L + GITD+ I E+P I + + A+N LL + DL N
Sbjct: 11 PDADPVEIENRIIELCHQFPHGITDQVIQNEMPHIEAQQRAVAINRLLSMGQLDLLRSNT 70
Query: 254 SLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNL 433
L+Y++K N +KG+DN+EK+VY +IE+AGNKGIW RDIR +SNL T++ K+LKNL
Sbjct: 71 GLLYRIKDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNL 130
Query: 434 ESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQ 613
ESKK+IKAVK V ASKKKVYMLYNL+PDRS+TGGAWY DQDFESEFV+VLN QC +FL
Sbjct: 131 ESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQS 190
Query: 614 RADNMRNNPRGPVFGRTQAYATATEVQKYITDLGISKXXXXXXXXXXXXXXXXYDG 781
+A+ R + + P+ R ++A++ EV KYI +LGISK YDG
Sbjct: 191 KAETARESKQNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDG 246
>UniRef50_Q9VD25 Cluster: Probable DNA-directed RNA polymerase III
subunit RPC6; n=6; Endopterygota|Rep: Probable
DNA-directed RNA polymerase III subunit RPC6 -
Drosophila melanogaster (Fruit fly)
Length = 293
Score = 237 bits (581), Expect = 2e-61
Identities = 117/231 (50%), Positives = 150/231 (64%), Gaps = 1/231 (0%)
Frame = +2
Query: 92 DTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGSLIYKL 271
+ + +L + + G T+ D+ +P + + V ALN LL++ ++ + L+Y+
Sbjct: 4 EVSQLLLAVVQGIPAGATNDDLTKALPDVPAATRVEALNILLQEGGIEILKKGEKLVYRA 63
Query: 272 KTQTNKHAI-KGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKV 448
K K A+ K ADNEEKVVY ++EE GNKGIWIRDIR++SNL QL K+LKNLE+KK+
Sbjct: 64 KDPEKKSALPKDADNEEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKL 123
Query: 449 IKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRADNM 628
IKAVK VNASKKKVYMLYNLEPD S+TGGAWYQDQDFE EFVDVLN QC RFL + D+
Sbjct: 124 IKAVKSVNASKKKVYMLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSA 183
Query: 629 RNNPRGPVFGRTQAYATATEVQKYITDLGISKXXXXXXXXXXXXXXXXYDG 781
GP+ + + T EVQK+I+DLGISK YDG
Sbjct: 184 EKKREGPLAFKQMSCCTVNEVQKFISDLGISKVNLAEADLETILKTVVYDG 234
>UniRef50_Q05DB8 Cluster: POLR3F protein; n=14; Eumetazoa|Rep:
POLR3F protein - Homo sapiens (Human)
Length = 275
Score = 233 bits (569), Expect = 5e-60
Identities = 109/205 (53%), Positives = 142/205 (69%)
Frame = +2
Query: 167 IPGISSVELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEE 346
+P I + + A+N LL + DL N L+Y++K N +KG+DN+EK+VY +IE+
Sbjct: 1 MPHIEAQQRAVAINRLLSMGQLDLLRSNTGLLYRIKDSQNAGKMKGSDNQEKLVYQIIED 60
Query: 347 AGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSL 526
AGNKGIW RDIR +SNL T++ K+LKNLESKK+IKAVK V ASKKKVYMLYNL+PDRS+
Sbjct: 61 AGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLQPDRSV 120
Query: 527 TGGAWYQDQDFESEFVDVLNVQCHRFLSQRADNMRNNPRGPVFGRTQAYATATEVQKYIT 706
TGGAWY DQDFESEFV+VLN QC +FL +A+ R + + P+ R ++A++ EV KYI
Sbjct: 121 TGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPMIQRNSSFASSHEVWKYIC 180
Query: 707 DLGISKXXXXXXXXXXXXXXXXYDG 781
+LGISK YDG
Sbjct: 181 ELGISKVELSMEDIETILNTLIYDG 205
>UniRef50_Q00SN1 Cluster: RNA polymerase III, subunit C34; n=2;
Ostreococcus|Rep: RNA polymerase III, subunit C34 -
Ostreococcus tauri
Length = 371
Score = 148 bits (358), Expect = 2e-34
Identities = 67/167 (40%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Frame = +2
Query: 119 ARKSSKGITDKDIIAEIPGISSV-ELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHA 295
A + G+ ++D+ + G+ SV E A+N LL + + ++F + SL+Y +
Sbjct: 93 ASGEANGVREQDLATMLHGVMSVNERAEAINALLSERKIEIFKRGDSLVYARVREERAAK 152
Query: 296 IKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNA 475
KG E+ +VY +I+ AGN G+W ++++ RSNL Q+TK+ K LE++K+IKAVK V
Sbjct: 153 FKGLSTEDMLVYQIIQHAGNAGMWTKELKQRSNLPVPQITKIFKTLEARKLIKAVKHVTQ 212
Query: 476 SKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQR 616
+KVYMLY LEP R +TGGAWY + + EF++VL QC +F+ R
Sbjct: 213 QNRKVYMLYELEPSREITGGAWYTEGTHDDEFINVLREQCVKFIYSR 259
>UniRef50_P91529 Cluster: Probable DNA-directed RNA polymerase III
subunit RPC6; n=2; Caenorhabditis|Rep: Probable
DNA-directed RNA polymerase III subunit RPC6 -
Caenorhabditis elegans
Length = 296
Score = 134 bits (324), Expect = 2e-30
Identities = 71/211 (33%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Frame = +2
Query: 80 MSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGSL 259
+S+ +++ +++ + + + +GI + + PG+ TA+N LL ++ + G +
Sbjct: 9 ISAAESESQVMQIVQAALEGIDMDALTSMTPGLPQTVRQTAINSLLSSKKLAIQQAPGGV 68
Query: 260 IYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLES 439
+ +LK T++ I G + EE+V+Y+LIEE+ +GIWI+++R S L QL K LK+LE+
Sbjct: 69 L-RLKVNTSEQ-IAGTE-EEQVIYSLIEESKTRGIWIKELREGSGLNQLQLRKTLKSLET 125
Query: 440 KKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRF-LSQR 616
KK+IK +K V + +K Y+L+++EPD SLTGG +Y DQ +SE ++ L C + S+R
Sbjct: 126 KKLIKTIKAVGTT-RKCYILFSIEPDMSLTGGTFYSDQQLDSELINTLISVCGSYAASRR 184
Query: 617 ADNMRNNPRGPVFGRTQAYATATEVQKYITD 709
+ NP R +Y E+ ++IT+
Sbjct: 185 KHAIDENPNNIQMQREASYIRPQEIAQFITE 215
>UniRef50_Q55A81 Cluster: RNA polymerase III subunit; n=2;
Dictyostelium discoideum|Rep: RNA polymerase III subunit
- Dictyostelium discoideum AX4
Length = 293
Score = 132 bits (318), Expect = 1e-29
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Frame = +2
Query: 86 SEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLF-NQNGSLI 262
SE+ + K L+L K G+T + I + G E+V +N+L+KQ R L N + +
Sbjct: 2 SEELENKFLDLCHKYPTGLTQQMIEVSL-GHKMEEIVKVINNLIKQGRLMLIQNSDETTS 60
Query: 263 YKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESK 442
YK ++ +G E+ ++Y LIE + N G W R+++ S Q+TK+LK LES+
Sbjct: 61 YKEVNPEDQAKFRGLGVEDFLIYQLIEASSNTGAWTRELKNSSGYQQVQITKILKTLESR 120
Query: 443 KVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQR 616
K+IK+VK + + +KKVYMLYN+EP R +TGG Y DQ ++ +++ ++ + F+ +
Sbjct: 121 KLIKSVKSIQSGRKKVYMLYNMEPSREITGGQLYSDQSYDHQYIQIMKMHIKTFVDNK 178
>UniRef50_O94553 Cluster: Probable DNA-directed RNA polymerase III
subunit RPC6; n=1; Schizosaccharomyces pombe|Rep:
Probable DNA-directed RNA polymerase III subunit RPC6 -
Schizosaccharomyces pombe (Fission yeast)
Length = 301
Score = 126 bits (305), Expect = 5e-28
Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 4/218 (1%)
Frame = +2
Query: 140 ITDKDIIAEIPGISSV-ELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNE 316
++ +D++ I SV +L +ALN LL + D Q L+Y+ + + +
Sbjct: 27 LSQQDLVEAIGASISVNDLSSALNILLSRRLLDPLRQGNVLVYRAVRLDEAKTVSTMEGD 86
Query: 317 EKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYM 496
E++VY+ I+ +GN+GIW + + +R+NL + + + LK+LESK ++K++K V +K+YM
Sbjct: 87 EQIVYSFIKNSGNEGIWRKTLTLRTNLHVSVVDRCLKSLESKNLVKSIKSVKNPTRKIYM 146
Query: 497 LYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRADNMRNNPRGP--VFG-RTQ 667
LY+L P LTGG W+ DQ+ + EF++ L +R++ ++ + GP V+G
Sbjct: 147 LYDLVPSTELTGGPWFTDQELDVEFIENLKKVIYRYVHSKSFPPKKAAMGPDLVWGPEYN 206
Query: 668 AYATATEVQKYITDLGISKXXXXXXXXXXXXXXXXYDG 781
Y TA ++ ++ I+K YDG
Sbjct: 207 GYPTALQIHNWLRSTNITKVDLSLANVISLVDVLIYDG 244
>UniRef50_Q8SR78 Cluster: DNA-DIRECTED RNA POLYMERASE III 34kDa
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep: DNA-DIRECTED
RNA POLYMERASE III 34kDa SUBUNIT - Encephalitozoon
cuniculi
Length = 236
Score = 115 bits (277), Expect = 1e-24
Identities = 53/156 (33%), Positives = 96/156 (61%)
Frame = +2
Query: 107 ILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGSLIYKLKTQTN 286
IL+ R +G+ ++++ +E P +S ++ LN LK++ LF G L YK + N
Sbjct: 5 ILDFIRSRPEGVVEEELSSEFPQMSKADVAKELNACLKRQEISLFRDKGVLYYK-PSPIN 63
Query: 287 KHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKC 466
D+ E +YNL+ ++G +G+W++ I+ ++N+ + + KVL+++ESK++IK+VKC
Sbjct: 64 ------VDDYELTIYNLVSQSGGEGVWLKVIKDKTNMPHNLVGKVLRSMESKRIIKSVKC 117
Query: 467 VNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFV 574
+ + +KVY+LY+ P +TGG W+ D D + E V
Sbjct: 118 LK-NNRKVYVLYDQVPSEEITGGTWFHDNDVDVECV 152
>UniRef50_P32910 Cluster: DNA-directed RNA polymerase III subunit
RPC6; n=6; Saccharomycetales|Rep: DNA-directed RNA
polymerase III subunit RPC6 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 317
Score = 115 bits (277), Expect = 1e-24
Identities = 66/188 (35%), Positives = 109/188 (57%), Gaps = 10/188 (5%)
Frame = +2
Query: 173 GISSV-ELVTALNDLLKQERFDLFNQNGSLIYK--LKTQTNKHAIKGADNEEKVVYNLIE 343
GI S+ +L++ + +LL + L QN L ++ L+++ K A A EE +VY+ IE
Sbjct: 41 GIGSLTDLMSIVQELLDKNLIKLVKQNDELKFQGVLESEAQKKATMSA--EEALVYSYIE 98
Query: 344 EAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRS 523
+G +GIW + I+ R+NL + K LK+LES++ +K+VK V +K+YMLY+L+P
Sbjct: 99 ASGREGIWSKTIKARTNLHQHVVLKCLKSLESQRYVKSVKSVKFPTRKIYMLYSLQPSVD 158
Query: 524 LTGGAWYQDQDFESEFVDVLNVQCHRFLSQRA-----DNMRNNPRGPVF--GRTQAYATA 682
+TGG W+ D + + EF++ L RF+S+ N N P+ VF + Y+T
Sbjct: 159 ITGGPWFTDGELDIEFINSLLTIVWRFISENTFPNGFKNFENGPKKNVFYAPNVKNYSTT 218
Query: 683 TEVQKYIT 706
E+ ++IT
Sbjct: 219 QEILEFIT 226
>UniRef50_Q5DD86 Cluster: SJCHGC02354 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02354 protein - Schistosoma
japonicum (Blood fluke)
Length = 305
Score = 109 bits (261), Expect = 1e-22
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 3/214 (1%)
Frame = +2
Query: 86 SEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFD-LFNQNGSLI 262
S +E++LNL + S +T K E +S ++ LN L K+ D L N + +L
Sbjct: 5 SSSLRERVLNLFKLSRGALTQKHFEKEFSDVSLTTILPILNALQKEGVLDVLVNADRTLS 64
Query: 263 YKLKTQTNKHAIKG-ADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLES 439
+ L+ Q + +K +D EE++VYN I AG + ++ I + L ++ ++LK+L S
Sbjct: 65 WLLRDQKSTETLKSLSDLEERLVYNAIRNAGEEAASLKLISSETKLPQNRIPRILKSLIS 124
Query: 440 KKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQ-DQDFESEFVDVLNVQCHRFLSQR 616
KK+IK V K+KVY+L LEP L + + ++EF+ +L C ++L +
Sbjct: 125 KKMIKEVPMAIGHKQKVYLLMELEPSEKLAANTLFAGESGVDAEFISILRAACLKYLQDK 184
Query: 617 ADNMRNNPRGPVFGRTQAYATATEVQKYITDLGI 718
A N ++ P+ R +Y + E+ ++IT+ I
Sbjct: 185 A-NSASHIADPLERRQASYVSCEEIHRFITNTKI 217
>UniRef50_Q6C2B2 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 282
Score = 107 bits (258), Expect = 2e-22
Identities = 57/168 (33%), Positives = 94/168 (55%)
Frame = +2
Query: 80 MSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGSL 259
MS++D K+L + +K T ++ A++ ++ +L + +L R + Q G +
Sbjct: 1 MSADDLHAKMLEGPK--AKLFTYAEV-ADLVDVAGEKLEAWIAELHNSSRVKVLEQGGQV 57
Query: 260 IYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLES 439
+ + + + ++E +VYN I E+ GIW+R I RSNL + + LK+LE
Sbjct: 58 MLQAVSIETADIVSKLTSDEYIVYNYIAESERDGIWVRTITARSNLHINVVHRCLKSLEQ 117
Query: 440 KKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVL 583
+ +IK VK V +K+YMLYNL+P LTGG W+ D + +SEFVD+L
Sbjct: 118 QHIIKMVKSVQQKTRKMYMLYNLQPSAELTGGPWFSDAELDSEFVDLL 165
>UniRef50_A5DFJ9 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 306
Score = 103 bits (248), Expect = 4e-21
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Frame = +2
Query: 188 ELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIW 367
EL+ + +L+ + L + G L ++ + ++E ++Y+ IE +G +GIW
Sbjct: 40 ELLELVQELMTSKYVKLVKEGGELRFQAISIVEASKFTSMSDDEAMIYSYIEASGREGIW 99
Query: 368 IRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQ 547
+ I+ ++NL + + LK+LE+++ IK++K V +K+YMLYNL+P +TGG W+
Sbjct: 100 TKTIKAKTNLHQHIVARCLKSLENQRYIKSIKSVKHPTRKIYMLYNLQPSIEVTGGPWFT 159
Query: 548 DQDFESEFVDVLNVQCHRFLSQRADNMRNNPRGPVFGRTQA-YATA 682
D + ++EF+D L RF++ + P P QA Y T+
Sbjct: 160 DSELDTEFIDSLVSVIWRFVASKTYPAAFQPPSPNVNPVQAMYPTS 205
>UniRef50_Q4P0N2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 540
Score = 101 bits (243), Expect = 2e-20
Identities = 52/175 (29%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 101 EKILNLARKSSKG--ITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGSLIYKLK 274
E L A +SS G IT I + + + A+N LL++ F + NG + +
Sbjct: 23 ESALYRAAQSSPGSIITQDQITEQFKHEQLDDRLQAINGLLRKSLFTAQSLNGQIQFAAT 82
Query: 275 TQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIK 454
+ + D E +VY+ I+++ N+GIW + ++ R+ L T + + LK+LE K+++K
Sbjct: 83 AKAEASMMGKLDENETLVYSHIKDSRNEGIWTKQLKARTGLHQTIINRCLKSLEQKQLVK 142
Query: 455 AVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRA 619
AVK V +K++ML+ L P L+GG WY D + ++ F++ L++ F+ ++
Sbjct: 143 AVKSVKYPTRKIFMLFGLTPSIELSGGPWYTDNELDTGFINELSMAILNFVRSKS 197
>UniRef50_Q6BYX4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 323
Score = 100 bits (239), Expect = 5e-20
Identities = 44/143 (30%), Positives = 83/143 (58%)
Frame = +2
Query: 188 ELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIW 367
+L+ +L+ ++ L Q L ++ + + I +E ++Y+ IE +G +GIW
Sbjct: 40 DLLMIAQELINRKLVKLVKQGDELKFQAISLSEASKITSMSEDEAMIYSYIEASGREGIW 99
Query: 368 IRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQ 547
+ I+ ++NL + + LK LE+++ IK++K V +K+YMLYNL+P +TGG W+
Sbjct: 100 TKTIKAKTNLHQHIVVRCLKALENQRYIKSIKSVKHPTRKIYMLYNLQPSIEVTGGPWFT 159
Query: 548 DQDFESEFVDVLNVQCHRFLSQR 616
D + ++EF+D L RF++ +
Sbjct: 160 DSELDTEFIDSLLTVIWRFVASK 182
>UniRef50_A2E408 Cluster: RNA polymerase Rpc34 subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: RNA
polymerase Rpc34 subunit family protein - Trichomonas
vaginalis G3
Length = 285
Score = 96.3 bits (229), Expect = 8e-19
Identities = 43/107 (40%), Positives = 67/107 (62%)
Frame = +2
Query: 263 YKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESK 442
YK + + G D++ +Y+LI++AGNKGIW RDIR A+ L+ VLK LE++
Sbjct: 73 YKAVPPKLQESFIGLDDDHHRIYDLIDKAGNKGIWRRDIRKAGGCADKTLSNVLKELETR 132
Query: 443 KVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVL 583
+IK++ ++ K K+Y+LY++ P +TGG WY D F + FV+ L
Sbjct: 133 CLIKSITSIHEKKLKLYLLYDMPPSEEITGGVWYLDGTFNTTFVEQL 179
>UniRef50_A6RMR9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 370
Score = 96.3 bits (229), Expect = 8e-19
Identities = 42/104 (40%), Positives = 66/104 (63%)
Frame = +2
Query: 263 YKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESK 442
+KL+TQ + +E+++VY LI+EAG +GIW + I+ RSNL + LK+LE+K
Sbjct: 81 WKLRTQEEAKNYRSLSSEQEIVYALIDEAGQEGIWTKTIKARSNLHDAVFRTALKHLETK 140
Query: 443 KVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFV 574
+I +K V A +K+Y+ +L+P TGGAWY D + + EF+
Sbjct: 141 HLISEMKSVEARNRKMYIKSSLQPSDRATGGAWYTDNELDEEFI 184
>UniRef50_Q0V6A9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 364
Score = 94.7 bits (225), Expect = 2e-18
Identities = 41/133 (30%), Positives = 79/133 (59%)
Frame = +2
Query: 188 ELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIW 367
EL L DL + L G +KL+++T+ ++ +E+++Y+ I++ +GIW
Sbjct: 61 ELTMLLQDLCDRHLLKLMTLEGEPCWKLRSRTDADKLRRLTPDERLLYHHIDQVQAEGIW 120
Query: 368 IRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQ 547
+ +R+R+N+ LTK LK+LESK ++++V V +K+Y+L +L+P + GG W
Sbjct: 121 SKALRMRTNVTQQVLTKCLKSLESKDLVQSVMSVKFPNRKMYLLKHLKPSEDIAGGPWQS 180
Query: 548 DQDFESEFVDVLN 586
+ DF++ +D ++
Sbjct: 181 EGDFDTALIDAIS 193
>UniRef50_A7QIQ1 Cluster: Chromosome chr9 scaffold_104, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr9 scaffold_104, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 411
Score = 93.5 bits (222), Expect = 5e-18
Identities = 44/119 (36%), Positives = 72/119 (60%)
Frame = +2
Query: 257 LIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLE 436
L+YKL + A + + E+V+Y+LI + GIW RD++ +NL + +TK LK L+
Sbjct: 179 LLYKLMKEYTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 238
Query: 437 SKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQ 613
KK+IK V + + +K YM EP + LTGGAWY + + ++E++ +L C + LS+
Sbjct: 239 VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSK 297
>UniRef50_Q5CWL5 Cluster: RNA polymerase III C34 subunit; rpc34p
ortholog; n=3; Cryptosporidium|Rep: RNA polymerase III
C34 subunit; rpc34p ortholog - Cryptosporidium parvum
Iowa II
Length = 319
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Frame = +2
Query: 236 LFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLT 415
L + N ++++L+T+ + NEE +V+ IE+AGN+GIW DIR + L +
Sbjct: 72 LSSVNNKVVFQLRTEEVACKLNKLSNEEYLVFCSIEDAGNQGIWTADIRKNTGLQTHVVQ 131
Query: 416 KVLKNL-ESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQ 592
+ +K L +I+ VK ++ +KVY+L +LEP + L+GG +Y++ +F+ FVD + +
Sbjct: 132 RAVKVLCNDWNLIRPVKSIHVKNRKVYILASLEPSKELSGGTFYENGEFDMAFVDSIKEK 191
Query: 593 CHRFLSQR 616
F+ +
Sbjct: 192 IISFIDSK 199
>UniRef50_A2QYC8 Cluster: Catalytic activity: Nucleoside
triphosphate + RNA(n) = Pyrophosphate + RNA(n+1); n=8;
Eurotiomycetidae|Rep: Catalytic activity: Nucleoside
triphosphate + RNA(n) = Pyrophosphate + RNA(n+1) -
Aspergillus niger
Length = 366
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/99 (39%), Positives = 59/99 (59%)
Frame = +2
Query: 281 TNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAV 460
T+ ++ +E +VYN+I G GIW+R I R+NL + L + LK+LES+ IK+V
Sbjct: 92 THLFRLRDLSPDESLVYNVIHSTGRSGIWVRAIGNRTNLHKSILDRCLKSLESRSYIKSV 151
Query: 461 KCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVD 577
V +K+YML NL P +TGGAW+ D + F++
Sbjct: 152 HNVKFPSRKMYMLANLAPSEDVTGGAWFTDGVLDENFIN 190
>UniRef50_UPI000023E625 Cluster: hypothetical protein FG00778.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00778.1 - Gibberella zeae PH-1
Length = 383
Score = 83.8 bits (198), Expect = 4e-15
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Frame = +2
Query: 98 KEKILNLARKSSKGITDKDIIAE---IPGISSVELVTALNDLLKQERFDLFNQ-NGSLIY 265
KE + R+S + +D + IP + L + L + F + +G +++
Sbjct: 20 KEALYERCRESGTDMFSQDDLMRLDVIPNRDLMLLARVVQSLTDDKLFITMREASGQVLW 79
Query: 266 KLKTQTNKHAIKGADNEEKV-VYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESK 442
K + H K +E+V VY+LI+++G GIW + ++ R N+ ++ L LK L++K
Sbjct: 80 KWRDSQEAHKYKQCSTDEQVMVYSLIDDSGGDGIWSQTLQKRLNMHDSVLKNALKQLQTK 139
Query: 443 KVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRA 619
+I K V KK+++ ++ P TGG WY DQ+ + F+D L F+ +++
Sbjct: 140 GLIAPFKNVEHPNKKMFIKASIRPSDRATGGPWYTDQNLDEAFIDELQRVVFDFIKRQS 198
>UniRef50_Q8ILN6 Cluster: RNA polymerase subunit, putative; n=5;
Plasmodium|Rep: RNA polymerase subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 341
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/132 (29%), Positives = 74/132 (56%)
Frame = +2
Query: 188 ELVTALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIW 367
E+V ALN L + N+N ++I +++ + +K + + +++ +E + N GIW
Sbjct: 74 EIVYALNILENARACSIKNENNTIITRMRNEQVTKKLKELSDIDFLIFTKVENSQNNGIW 133
Query: 368 IRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQ 547
D+R ++ L Q+ K +K L K+IK V ++ +K+Y+LY+LE + GG++Y
Sbjct: 134 TADLRKQTKLLIHQVQKGVKLLCENKLIKQVNNIHVKNRKMYILYDLEASEKVIGGSFYT 193
Query: 548 DQDFESEFVDVL 583
D +F + VD +
Sbjct: 194 DGEFNKKVVDYI 205
>UniRef50_A7ASE8 Cluster: RNA polymerase rpc34 subunit containing
protein; n=1; Babesia bovis|Rep: RNA polymerase rpc34
subunit containing protein - Babesia bovis
Length = 293
Score = 80.6 bits (190), Expect = 4e-14
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Frame = +2
Query: 179 SSVELVTALNDLLKQERFDLFNQN--GSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAG 352
+S++ + L LLK R F+Q+ G KL+ ++ + + E V+ IE AG
Sbjct: 45 NSLDFINFLK-LLKGSRNYSFHQDAEGRKYVKLRDSVSRQQVSRLHDLEYAVFCAIETAG 103
Query: 353 NKGIWIRDIRIRSNLANTQLTKVLKNL-ESKKVIKAVKCVNASKKKVYMLYNLEPDRSLT 529
++GIW DI+ + QLT+ LK L E ++K V V+ +K+YML+N++P R LT
Sbjct: 104 DRGIWTADIKKICEITGNQLTRSLKVLLEQHGLVKQVTNVHQKSRKLYMLFNVKPARELT 163
Query: 530 GGAWYQDQDFESEFVDVLNVQCHRFLSQ 613
GG++Y + +F V+ + Q +L++
Sbjct: 164 GGSFYFNGEFNEMLVEHIQEQVGAYLAK 191
>UniRef50_UPI0000DC13E3 Cluster: UPI0000DC13E3 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC13E3 UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 76.2 bits (179), Expect = 9e-13
Identities = 57/177 (32%), Positives = 87/177 (49%)
Frame = +2
Query: 251 GSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKN 430
G L Y++K N + +KG++++E ++Y ++++ GNKGIW DI S + N Q LK
Sbjct: 20 GHLEYRIKDSQNANKMKGSNHQE-LIYKIMQDIGNKGIWNTDINFVSEIDNFQEFGKLKA 78
Query: 431 LESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLS 610
+S KV ++ +K+ +MLYNL+P DFESEFV +LN QC +FL
Sbjct: 79 YQSYKVYSSL------QKEDFMLYNLQP-------------DFESEFVYMLNQQCFKFLQ 119
Query: 611 QRADNMRNNPRGPVFGRTQAYATATEVQKYITDLGISKXXXXXXXXXXXXXXXXYDG 781
+ + ++ A+ EV KY +LGIS YDG
Sbjct: 120 MKRE---------TDDTVRSLASPLEVWKY-CELGISTVELSLEDIETISDTLIYDG 166
>UniRef50_Q2HEQ1 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 430
Score = 72.9 bits (171), Expect = 8e-12
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Frame = +2
Query: 128 SSKGITDKDIIAEIPGISSVELVTALNDLLKQERF--DLFNQNGSLIYKLKTQTNKHAIK 301
S K + D +II + V L+ ++ L ++ + N + + ++ +++
Sbjct: 35 SQKDLNDLNIIPN----NDVNLLLSVVQRLCDDKLLVGIANHHAGMAWRWRSREEAKKYT 90
Query: 302 GADNEEKV-VYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNAS 478
N+E V VY++I+EAG GIW R I+ + N+ + +K LE+K I ++K V
Sbjct: 91 SLPNDEAVMVYSIIDEAGADGIWNRTIKNKLNMHEAVVKNCIKFLETKGYIASMKNVEHP 150
Query: 479 KKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQRADNMRNNPRGPVFG 658
KK+Y+ L P TGG W+ + + ++ F+ L ++ ++ + PV G
Sbjct: 151 NKKMYIKATLRPSERATGGPWFTEGELDTAFISELEGIVFEYIKTKSAYRGSQ---PVPG 207
Query: 659 RTQAYATATEVQK 697
A A AT+ K
Sbjct: 208 GAAASAGATKAPK 220
>UniRef50_Q4UHI1 Cluster: DNA-directed RNA polymerase III
(-specific) subunit (RPC34 homologue), putative; n=2;
Theileria|Rep: DNA-directed RNA polymerase III
(-specific) subunit (RPC34 homologue), putative -
Theileria annulata
Length = 476
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +2
Query: 326 VYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNL-ESKKVIKAVKCVNASKKKVYMLY 502
++ IE AG+KG+W DIR L Q+ + +K L ES ++I+ + VN +K+++L
Sbjct: 94 IFCTIETAGDKGLWTADIRKILGLHINQVQRGVKYLYESNRLIRPITDVNYKSRKLFILS 153
Query: 503 NLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLS 610
+LEP +TGG++Y + +F V+ L Q FLS
Sbjct: 154 SLEPSTQITGGSFYNNGEFNELLVEKLQEQICSFLS 189
>UniRef50_UPI00006CEB60 Cluster: RNA polymerase Rpc34 subunit family
protein; n=1; Tetrahymena thermophila SB210|Rep: RNA
polymerase Rpc34 subunit family protein - Tetrahymena
thermophila SB210
Length = 286
Score = 66.5 bits (155), Expect = 7e-10
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Frame = +2
Query: 89 EDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQ-NGSLIY 265
E+ EKI+ + + +GIT +++ +I + + L +LLK+ N N ++
Sbjct: 3 EEYSEKIIGIVKSYQEGITLTELL-KILEVDQNAIKPELQNLLKEGYLTCTNVGNEQIVE 61
Query: 266 KLKTQTNKH---AIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLE 436
Q K A +E VY +I +A NKGI +DI ++ +A LTK+L L+
Sbjct: 62 YHDPQDQKQLNVAASDLPQQEFQVYKIIFQAKNKGIDRKDIGNKTGIATGTLTKILNQLK 121
Query: 437 SKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVL 583
K IK+VK N++ K E S++GG WY+D + +D L
Sbjct: 122 KKNWIKSVKGANSTGK--------ELSESISGGIWYKDGVLNKDLIDEL 162
>UniRef50_Q4FXS2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 448
Score = 63.3 bits (147), Expect = 7e-09
Identities = 38/139 (27%), Positives = 67/139 (48%)
Frame = +2
Query: 200 ALNDLLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDI 379
A+ L++Q R L NG+ TQ + + +V + + +G+ GI +
Sbjct: 44 AVRQLMEQNRVRLRRGNGA-----DTQIYISIVNNINENLSLVLDAVRGSGSSGIDQTQL 98
Query: 380 RIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDF 559
+ + T+L K L L +K +IK + K++Y L+N++P +TGGA Y ++
Sbjct: 99 LSKVRMPKTELGKALAALTAKNLIKEHRSFTNRAKRIYTLFNIDPSTHITGGAMYCGEEL 158
Query: 560 ESEFVDVLNVQCHRFLSQR 616
+ FVD + RF+S R
Sbjct: 159 DVAFVDEWRRELTRFVSTR 177
>UniRef50_Q5KEY6 Cluster: DNA-directed RNA polymerase iii 34 kDa
polypeptide, putative; n=1; Filobasidiella
neoformans|Rep: DNA-directed RNA polymerase iii 34 kDa
polypeptide, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 559
Score = 61.7 bits (143), Expect = 2e-08
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Frame = +2
Query: 80 MSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNG-- 253
MS+ D + LA K+ K ++ I A P +S +++++ LLK G
Sbjct: 4 MSTADQQVWKKVLAAKN-KNMSLTQIEASFPTMSKKAVMSSVTTLLKLRLLSQVKGKGDD 62
Query: 254 -SLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIR---SNLANTQLTKV 421
+++Y +T E+ ++ ++I AGN+GI I + + L KV
Sbjct: 63 KAMVYHAQTPEEAKQKATLTQEQSIILSIIRSAGNRGIASAQITRTIGTDTMPISMLRKV 122
Query: 422 LKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQD-QDFESEFVDVL 583
LK LES+ IK K VNA Y+L +L+ ++GG W+ D ++++ V+ +
Sbjct: 123 LKTLESEGHIKQFKPVNAPTSVYYILAHLKLPEEISGGVWFDDNKEYDQGLVETI 177
>UniRef50_Q4CQY6 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 363
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 323 VVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLY 502
+V + I +GN GI + R L ++ K L+ L ++K IK +C + K++Y+L+
Sbjct: 78 LVLDAIRSSGNSGIDQATLCSRVRLPKNEVIKSLQLLVAQKRIKERRCFSNRAKRIYLLF 137
Query: 503 NLEPDRSLTGGAWYQDQD 556
EP +TGG +Y +D
Sbjct: 138 EFEPSDEITGGTFYGGED 155
>UniRef50_Q9LSZ5 Cluster: Genomic DNA, chromosome 5, P1 clone:MQM1;
n=2; Arabidopsis thaliana|Rep: Genomic DNA, chromosome
5, P1 clone:MQM1 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 230
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/99 (27%), Positives = 48/99 (48%)
Frame = +2
Query: 317 EKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYM 496
EK + +LI +G + +++ + T +T+++ +L K +IK V +N K Y+
Sbjct: 21 EKKLLDLIRINQGRGATMFELKREKTIPATIVTRLIASLRKKNLIKEVANMNNKGVKHYL 80
Query: 497 LYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQ 613
EP LTGG WY D + ++ L +C L +
Sbjct: 81 AMEFEPCSELTGGEWYTDGALDLSKIEDLKAKCVMILER 119
>UniRef50_Q11V51 Cluster: DNA processing protein; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: DNA processing protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 364
Score = 39.9 bits (89), Expect = 0.070
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Frame = +2
Query: 146 DKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGSLIYKLK------TQTNKHAIKG- 304
D++++A +PG + N+L+KQ + LI L Q +KH I
Sbjct: 248 DREVLA-VPGRITDMASEGCNNLIKQNKAHALTSAADLIELLNWDITPSQQAHKHIILAD 306
Query: 305 ADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAV 460
+ +E ++Y ++ + N+GI I ++ +S L+ +++ VL +E K ++KA+
Sbjct: 307 LEEDELMIYAVLTD--NEGIHIDELSWKSQLSMQKISSVLLEMEFKGIVKAL 356
>UniRef50_O34141 Cluster: HsdR; n=12; Bacteria|Rep: HsdR - Klebsiella
pneumoniae
Length = 1102
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 206 NDLLKQERFDLFNQNGS-LIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNK 358
+D+L E FD F+Q + +IY +KT+ +A G D EEK Y+++ +K
Sbjct: 956 DDVLNGEEFDSFSQEMTDIIYDIKTEMGTYAEMGIDIEEKAFYDILAHMRDK 1007
>UniRef50_A6DQ23 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 860
Score = 37.5 bits (83), Expect = 0.37
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = -1
Query: 640 RIVSHIISSLTQEPVALYIEDIYKLGFKVLV--LVPSSPCQ*SIWFQVVKHINLLFRGIN 467
++ S+I S L + + + +LG + L+ ++PS + I+F ++ HI L RG+
Sbjct: 164 QVTSYICSFLLM--LIFMVAGMQQLGIEALLNSVLPSDVVETLIFFSIIPHIASLARGVF 221
Query: 466 TFHSFYHFFTFQIFEDFSQLSVCKIR 389
F +FF+ +F S +++ + R
Sbjct: 222 DLRDFIYFFSIMLFGLGSTVAILRCR 247
>UniRef50_Q54CP1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 390
Score = 37.5 bits (83), Expect = 0.37
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 272 KTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKV- 448
KT TNK+ +N K N I NK D ++N N + +KN KKV
Sbjct: 19 KTNTNKNNNNNNNNNNKNKQNKINNKNNKNNKNNDSNNKNNNTNNKNNINIKNKNLKKVE 78
Query: 449 -IKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLN 586
K++K ++++K K +L NL+ + + Q E D+ N
Sbjct: 79 NNKSLKVISSNKNK-NILNNLKKEEKVNSNDILIQQQQNREKEDITN 124
>UniRef50_Q4J6M9 Cluster: Conserved protein; n=2; Sulfolobus|Rep:
Conserved protein - Sulfolobus acidocaldarius
Length = 78
Score = 37.5 bits (83), Expect = 0.37
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +2
Query: 320 KVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYML 499
K+V ++ E + + R+++ + L L LK L+ KKVIKA+ C++ ++++VY++
Sbjct: 9 KLVLKILME--RRSLRFRELKEETQLPTRTLYYALKLLKEKKVIKAMPCLDDTRERVYLV 66
Query: 500 YNLE 511
E
Sbjct: 67 VESE 70
>UniRef50_Q4J948 Cluster: Conserved Crenarchaeal protein; n=3;
Sulfolobaceae|Rep: Conserved Crenarchaeal protein -
Sulfolobus acidocaldarius
Length = 138
Score = 37.1 bits (82), Expect = 0.49
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 317 EKVVYNLIEEAGNKGIWIRDIRIRSNL-ANTQLTKVLKNLESKKVIKAVKCVNASKKKVY 493
E+++Y I+EAG+KGI RD+ L A T + K +E KK+ K K + + K V
Sbjct: 23 EELIYQKIKEAGDKGIPQRDLIKNLGLDARVANTVIKKLIEQKKIKK--KSIKENGKNVI 80
Query: 494 MLYNLEPDR 520
L+ E +R
Sbjct: 81 KLFPNEEER 89
>UniRef50_Q22TK4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2536
Score = 36.7 bits (81), Expect = 0.65
Identities = 46/198 (23%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Frame = +2
Query: 77 KMSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGS 256
K S + KEK+ ++ + +K + + + VT L + LKQ + + NQ+G+
Sbjct: 574 KKSFQIEKEKLSQQLQEQLNNVENKTLTIQ----KLNQTVTELQNKLKQIQLESNNQSGN 629
Query: 257 LIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWI---RDIRIRS-----NLANTQL 412
I +++ Q + I+ E++ NLI++ K I + +D +I S NL +L
Sbjct: 630 QIKQIR-QEYEQKIEKIQKEQQEQINLIKQENLKAISLLTQKDQKIESLQKQFNLQQQKL 688
Query: 413 T-KVLKNLESKKVIKAVKCVNASKKKV-YMLYNLEPDRSLTGGAWYQDQDF----ESEFV 574
++ K E++++I++++ ++ K + N + D T +D+ F + +
Sbjct: 689 AEQIKKQNENQQLIQSLQQNLKNQNKFNNQIVNEQQDLQETNNQQLEDEYFLSTQQKQSQ 748
Query: 575 DVLNV-QCHRFLSQRADN 625
DVL + + ++FL Q D+
Sbjct: 749 DVLKISKENQFLDQNQDS 766
>UniRef50_Q97NY8 Cluster: Transcriptional regulator, MarR family;
n=13; Streptococcus|Rep: Transcriptional regulator, MarR
family - Streptococcus pneumoniae
Length = 147
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = +2
Query: 248 NGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLK 427
NG + KL +Q + +G E+ + ++ + DI + + LAN LT ++K
Sbjct: 15 NGRIFQKLLSQDPEALYRG---EQGKILAVLWNSETGCATATDIALATGLANNTLTTMIK 71
Query: 428 NLESKKVIKAVKCVNASKKKVYMLYNLEPDRSLTG 532
LE +K++ C +KK +L L + G
Sbjct: 72 KLEEQKLVIVSPCGKDKRKKYLVLTELGKSQKEVG 106
>UniRef50_A4W305 Cluster: Leucine-rich repeat (LRR) protein; n=5;
Streptococcus suis|Rep: Leucine-rich repeat (LRR)
protein - Streptococcus suis (strain 98HAH33)
Length = 429
Score = 35.9 bits (79), Expect = 1.1
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 239 FNQNGSLIYKLKTQTNKHA-IKGADNEEKVVYNLIEEAGNKGIWI---RDIRIRSNLANT 406
F +N + L + NK ++G + EK+V +E K + I ++ +R N+A+
Sbjct: 280 FVKNNPNLTSLTLKNNKITELQGIEENEKLVNLDVEGNQIKTLEIEGKQESVVRLNVADN 339
Query: 407 QLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSL 526
QL KNLE KA++ +NASK + L EP+++L
Sbjct: 340 QL----KNLEGVNDYKALEDLNASKNDIETLAITEPNKTL 375
>UniRef50_Q239Z6 Cluster: Cyclic nucleotide-binding domain
containing protein; n=14; Tetrahymena thermophila
SB210|Rep: Cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 657
Score = 35.9 bits (79), Expect = 1.1
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 1/190 (0%)
Frame = +2
Query: 80 MSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNG-S 256
+++++ EKI N + TDK+ I+ I IS+ + T N+ +KQ F + N
Sbjct: 301 ITNDNKSEKINNQVANFNLN-TDKNAISSINSISTSQQKTEHNNTIKQNIFSKSHINSDE 359
Query: 257 LIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLE 436
++L+ ++ ++ ++++ +N+I + + I S+L Q + K
Sbjct: 360 STFELRKNNHQSSLIKLQQDDQIQFNIIPHYNS------EQSIHSSLKEPQQFQYTKQQS 413
Query: 437 SKKVIKAVKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQR 616
S+ V S+ +VY + L Q+Q + VLN Q + + Q
Sbjct: 414 SQS-------VKFSQNQVYNNQSQANKDQLIQPLQQQNQQLQQSLPQVLNDQILKLICQA 466
Query: 617 ADNMRNNPRG 646
++N G
Sbjct: 467 MQLQQSNQSG 476
>UniRef50_Q1NLA7 Cluster: DsrD protein; n=3;
Deltaproteobacteria|Rep: DsrD protein - delta
proteobacterium MLMS-1
Length = 76
Score = 35.1 bits (77), Expect = 2.0
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 80 MSSEDTKEKILNLARKSSKG-ITDKDIIAEIPGISSVELVTALNDLLKQERFDLFNQNGS 256
+S+ED KEKI+ A K + KD A P + A NDL+K+ R ++ +
Sbjct: 3 LSTEDLKEKIMEKALNGPKSQLYVKDFFACDPEAKPRAVKNAANDLVKEGRLVFWSSGST 62
Query: 257 LIYKLKTQTNK 289
+Y K + K
Sbjct: 63 TMYAAKERGRK 73
>UniRef50_Q23AQ5 Cluster: Cation channel family protein; n=7;
Eukaryota|Rep: Cation channel family protein -
Tetrahymena thermophila SB210
Length = 2320
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = +2
Query: 212 LLKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIW-IRDIRIR 388
+++ + FD + N L Y+L QTN +K + N++K + + + N+ + +D + +
Sbjct: 936 IMRSQSFDESSLN-HLSYQLANQTNSQMVKNSSNDQKNTHPFMLDIKNQQVQKQQDEKFK 994
Query: 389 SN---LANTQLTKVLKNLESKKVIKAV-KCVNASKKKV 490
SN ++N +K N S+ IK+V N SK ++
Sbjct: 995 SNNSTISNLDQSKQNLNYTSQSTIKSVSNGQNVSKNEL 1032
>UniRef50_A0CR29 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 454
Score = 35.1 bits (77), Expect = 2.0
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -1
Query: 502 VKHINLLFRGINTFHSFYHFFTFQIFEDFSQLSVCKIRTDPNISNPNSFISCFFNQIIDY 323
VKH + +++ IN TF+ + DF++L + ++ N NP F F Q+I+
Sbjct: 41 VKHFDFIYKTINQDRETVQMITFECYPDFTKLKSLEELSNNNELNPYHFKE-IFKQLIEG 99
Query: 322 LF 317
L+
Sbjct: 100 LY 101
>UniRef50_Q0DB47 Cluster: Os06g0603400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0603400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 146
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 317 EKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKV 448
E+ +Y L+ G+KG+ +IRI++ + + LTK L++L + +V
Sbjct: 54 ERPIYKLVFAGGDKGMSQTEIRIKTGMPTSTLTKHLRDLRAGRV 97
>UniRef50_Q8V317 Cluster: Polymerase protein; n=2; unclassified
Rhabdoviridae|Rep: Polymerase protein - Trout
rhabdovirus 903/87
Length = 456
Score = 34.3 bits (75), Expect = 3.5
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 140 ITDKDIIAEIPGIS--SVELVTALNDLLKQERFDLFNQNGSLIYK-LKTQTNKH 292
+ KD P IS ++ L+ LND L ++RF+ N N +LI K LKTQ KH
Sbjct: 35 LNQKDYSLNSPLISDATIALMNYLNDGLTEKRFERSNANFALIQKTLKTQRWKH 88
>UniRef50_A5N965 Cluster: Transcriptional regulator; n=1;
Clostridium kluyveri DSM 555|Rep: Transcriptional
regulator - Clostridium kluyveri DSM 555
Length = 345
Score = 34.3 bits (75), Expect = 3.5
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +2
Query: 284 NKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVK 463
N K + +EK ++NLI++ G + +I +R+ T L +++ LE K++I K
Sbjct: 14 NYRLFKDLNPDEKNIFNLIQKDG--AMTKNEILLRTGTKLTSLNRIMSPLEKKRII-VQK 70
Query: 464 CVNAS 478
C+ S
Sbjct: 71 CIGES 75
>UniRef50_Q0PC85 Cluster: Putative flagellar hook-length control
protein; n=10; Campylobacter|Rep: Putative flagellar
hook-length control protein - Campylobacter jejuni
Length = 598
Score = 33.9 bits (74), Expect = 4.6
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +2
Query: 68 YFPKMSSEDTKEKILNLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERFD--LF 241
+ P KE + + KG D+ I +S + +L D LK + D L
Sbjct: 65 FLPDHMKISQKEVVNEAMSRLQKGAFDESDKISIFESASFMQILSLLDKLKTDTADVKLA 124
Query: 242 NQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRI 385
N + L +KT+ N +A+KGA N + L++ A + G+ +++I++
Sbjct: 125 NLSTQLSSLIKTEANFNALKGASN----LSELLDIAKDLGLNVKNIKV 168
>UniRef50_A6DA49 Cluster: Acriflavin resistance protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Acriflavin
resistance protein - Caminibacter mediatlanticus TB-2
Length = 1045
Score = 33.5 bits (73), Expect = 6.1
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +2
Query: 209 DLLKQERFDLFNQNGSLIY---KLKTQTNKHAIKGADNEEKVVYNLIEEAGNKGIWIRDI 379
DL ++ D +N+ + I+ K+K QT ++ + K + I+ +G K + + I
Sbjct: 616 DLKDRKPTDFYNKYIAPIFQPIKIKDQTRVYSAYEIASMLKKDFKNIKISGLKELNV--I 673
Query: 380 RIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYMLYNLEPDRSL 526
++ + + + + + +SKKVI A+K + KK+ +YN+ D L
Sbjct: 674 VPQAGVVKSDVVISIASNDSKKVISAIKTLEEEMKKIKGVYNIYDDAEL 722
>UniRef50_UPI00015971CA Cluster: DctS; n=1; Bacillus
amyloliquefaciens FZB42|Rep: DctS - Bacillus
amyloliquefaciens FZB42
Length = 540
Score = 33.1 bits (72), Expect = 8.0
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +2
Query: 284 NKHAIKGADNEEKVVYNLIEEAGNKGIW--IRDIRIRSNLANTQLTKVLKNLESKKVIKA 457
N+H I + + K ++N+ +E + IW ++D R+ + + + S KVI +
Sbjct: 231 NQHHITIFNEKAKQIFNVRQETDGRLIWDVLKDSRLPEIVERNRAVYNEEIQVSGKVIMS 290
Query: 458 VKCVNASKKKVYMLYNLEPDRSLTGGAWYQDQDFESEFVDVLNVQCHRFLSQ 613
+ KKKV + DR+ ++ FVD L VQ H +++
Sbjct: 291 SRIPIVMKKKVIGAVAIFQDRT-EAAKMAEELTGVKNFVDALRVQNHEHMNK 341
>UniRef50_A5N1R7 Cluster: Predicted transcriptional regulator; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted
transcriptional regulator - Clostridium kluyveri DSM 555
Length = 402
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 284 NKHAIKGADNEEKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVK 463
N +A+K EEK ++NL+++ G + I R+++ T L V++ LE K+I
Sbjct: 4 NSNALKSLSFEEKKIFNLLQKNGR--LSKNKISSRTDIKLTTLNYVMEPLEKSKMI-VES 60
Query: 464 CVNAS 478
C+ S
Sbjct: 61 CIGES 65
>UniRef50_A7PS02 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 584
Score = 33.1 bits (72), Expect = 8.0
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 113 NLARKSSKGITDKDIIAEIPGISSVELVTALNDLLKQERF-DLFNQNGSLIYKLKTQTNK 289
N K+ K + + +IPG SS+EL + ++D ++R + + ++I +L T
Sbjct: 509 NEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLE- 567
Query: 290 HAIKGAD-NEEKVVYNLIE 343
+KG + N V+YN+ E
Sbjct: 568 --VKGYEANPSLVLYNIDE 584
>UniRef50_Q7RF86 Cluster: GYF domain, putative; n=6; Plasmodium
(Vinckeia)|Rep: GYF domain, putative - Plasmodium yoelii
yoelii
Length = 2031
Score = 33.1 bits (72), Expect = 8.0
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 176 ISSVELVTALNDL-LKQERFDLFNQNGSLIYKLKTQTNKHAIKGADNEEKVVYNLIEEAG 352
+S ++ +ND K+ +F+L N N S K N + +N +L
Sbjct: 1193 LSYIDNKININDFETKESQFNLINSNNSTSIPSKCVENNNIQADVENNNNKKKSL----- 1247
Query: 353 NKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVN 472
N W+ I I SN N +K + ++ + V ++C N
Sbjct: 1248 NINKWLNFIGISSNKKNKDASKNISDINNTNVDATIQCSN 1287
>UniRef50_A1RX49 Cluster: Putative uncharacterized protein; n=1;
Thermofilum pendens Hrk 5|Rep: Putative uncharacterized
protein - Thermofilum pendens (strain Hrk 5)
Length = 137
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +2
Query: 317 EKVVYNLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLESKKVIKAVKCVNASKKKVYM 496
E+ V L+ EAG KG+ R++ + ++ + + K+L+ LES+ +I A + V +K Y+
Sbjct: 28 ERRVLELLREAGEKGVLQRELWKKLDVDSRKGLKILRKLESQGLI-AKEQVVYKGRKTYV 86
Query: 497 L 499
L
Sbjct: 87 L 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,238,602
Number of Sequences: 1657284
Number of extensions: 11385415
Number of successful extensions: 36782
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 35190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36737
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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