Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18d05f
(781 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 1.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 4.2
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 4.2
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 22 5.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 9.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.7
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 9.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.7
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.8 bits (49), Expect = 1.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 549 SWYQAPPVNDLSGSKL*SI*TF--FLEALTHFTAFITFLLSKFLRT 418
+WYQ PP+N + L + F+ A+ + FL +K LRT
Sbjct: 40 NWYQYPPLNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRT 85
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L N LES
Sbjct: 86 DSRDRSNTSNTSKTVILSNKLES 108
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 218 KQERFDLFNQNGSLIYKLKTQTNKHAIKGAD 310
++ RF F+Q G L+Y+ +H I+ D
Sbjct: 502 EERRFFSFHQWGILVYEPSACRPRHEIRSTD 532
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L N LES
Sbjct: 86 DSRDRSNTSNTSKTIILSNKLES 108
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 76 KNEFRRYKRENTKSCKKKLERNYRQGYNC 162
K + RRY++ + + K ER R+ Y+C
Sbjct: 246 KEKDRRYEKLHNEKEKLLEERTSRKRYSC 274
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN 430
D R RSN +NT T +L N
Sbjct: 86 DSRDRSNTSNTSKTVILSN 104
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 332 NLIEEAGNKGIWIRDIRIRSNLANTQLTKVLKNLES 439
+L+E + NK + ++ N AN + N+ES
Sbjct: 85 SLVEFSENKNCNAGSLTVKKNFANKYCGNITLNIES 120
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.6
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 549 SWYQAPPVNDLSGSKL*SI*TF--FLEALTHFTAFITFLLSKFLRT 418
+WYQ PP+N + L + F+ + + FL +K LRT
Sbjct: 6 NWYQYPPLNPMWHGILGFVIGMLGFVSVMGNGMVVYIFLSTKSLRT 51
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN 430
D R RSN +NT T +L N
Sbjct: 86 DSRDRSNTSNTSKTIILSN 104
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNTSNTSKTVILSDKLES 108
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNTSNTSKTVILSDKLES 108
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNASNTSKTVILSDKLES 108
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 374 DIRIRSNLANTQLTKVLKN-LES 439
D R RSN +NT T +L + LES
Sbjct: 86 DSRDRSNTSNTSKTVILSDKLES 108
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 239 INQNVLVSADHLKQLLV 189
INQN+ + DH K ++
Sbjct: 413 INQNIAQNIDHAKNTII 429
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 43 INLIHKRLIFSKNE 84
+N I KRL+FS N+
Sbjct: 249 VNEIEKRLLFSHND 262
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 155 IIAEIPGISSVELVTALNDLLKQERFDLFNQN 250
I A+ PG+ + ELV +++ L+ + QN
Sbjct: 346 IAADRPGLRNTELVERMHNKLRNALQTVLAQN 377
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,939
Number of Sequences: 438
Number of extensions: 3597
Number of successful extensions: 34
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -