Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18c19r
         (795 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7I0C0 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_Q2V2M6 Cluster: CGMP-specific phosphodiesterase; n=3; P...    35   2.0  
UniRef50_Q1FL81 Cluster: Phosphatidylserine decarboxylase; n=1; ...    34   4.7  
UniRef50_A0DW89 Cluster: Chromosome undetermined scaffold_67, wh...    33   8.3  

>UniRef50_A7I0C0 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter hominis ATCC BAA-381|Rep: Putative
           uncharacterized protein - Campylobacter hominis (strain
           ATCC BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
          Length = 541

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 153 NKKLLNISVKGTSVLTKWTVDNYNLLCSNAFLHYIILNLL 34
           NKK L I + G  ++ K ++D Y+ +C   +  Y + N L
Sbjct: 490 NKKCLEIEISGLDIIVKKSLDQYDRICQKLYQDYTVANSL 529


>UniRef50_Q2V2M6 Cluster: CGMP-specific phosphodiesterase; n=3;
           Plasmodium|Rep: CGMP-specific phosphodiesterase -
           Plasmodium falciparum
          Length = 884

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -1

Query: 222 CYICFSLLFVFKILEF*YHVDVRNKKLLNISVKGTSVLTKWTVDNYNLLCSNAF 61
           C++ FS LF+FKI+   Y+  V  KK   + VK  +++ K      N   +NA+
Sbjct: 369 CFLFFSFLFIFKIIMSLYYEYVYEKKYRILFVKKNNLIEKRITKRKNTNINNAY 422


>UniRef50_Q1FL81 Cluster: Phosphatidylserine decarboxylase; n=1;
           Clostridium phytofermentans ISDg|Rep: Phosphatidylserine
           decarboxylase - Clostridium phytofermentans ISDg
          Length = 288

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -1

Query: 192 FKILEF*YHVD--VRNKKLLNISVKGTSVLTKWTVDNYNLLC 73
           FKI    Y V+  ++NKKL    V GT V+ + TVDNY+  C
Sbjct: 122 FKIKNSLYTVESILKNKKLAKEYVGGTCVILRLTVDNYHRYC 163


>UniRef50_A0DW89 Cluster: Chromosome undetermined scaffold_67, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_67,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 987

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 403 NENCYSVHMSRLLSKAAICAFGQKKFIEMSYQIDLNIIVSFKEYGSK 543
           N+ CY    S   S  A+C FGQ KF   +YQ+  N+    ++Y  K
Sbjct: 441 NDGCYQCKFS-CPSNCALCEFGQCKFCNNNYQLIGNLCHFSRKYEDK 486


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,874,572
Number of Sequences: 1657284
Number of extensions: 14457961
Number of successful extensions: 28992
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28969
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)