Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18c09r
         (806 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016100-1|AAV36985.2|  391|Drosophila melanogaster LD30448p pro...    55   1e-07
AE014296-995|AAN12106.1|  207|Drosophila melanogaster CG10576-PB...    55   1e-07
AE014296-994|AAF50751.1|  391|Drosophila melanogaster CG10576-PA...    55   1e-07

>BT016100-1|AAV36985.2|  391|Drosophila melanogaster LD30448p
           protein.
          Length = 391

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = -3

Query: 804 LYERPGELVAQFKFTALLLPSGTHRITGLPFDKSQCKSERSIKDPE 667
           LYE+P E+VAQFK T LL+P+G + +TG+PF+     SE S+   E
Sbjct: 307 LYEKPSEIVAQFKHTVLLMPNGVNLVTGIPFEAENYVSEYSVAQEE 352


>AE014296-995|AAN12106.1|  207|Drosophila melanogaster CG10576-PB,
           isoform B protein.
          Length = 207

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = -3

Query: 804 LYERPGELVAQFKFTALLLPSGTHRITGLPFDKSQCKSERSIKDPE 667
           LYE+P E+VAQFK T LL+P+G + +TG+PF+     SE S+   E
Sbjct: 123 LYEKPSEIVAQFKHTVLLMPNGVNLVTGIPFEAENYVSEYSVAQEE 168


>AE014296-994|AAF50751.1|  391|Drosophila melanogaster CG10576-PA,
           isoform A protein.
          Length = 391

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = -3

Query: 804 LYERPGELVAQFKFTALLLPSGTHRITGLPFDKSQCKSERSIKDPE 667
           LYE+P E+VAQFK T LL+P+G + +TG+PF+     SE S+   E
Sbjct: 307 LYEKPSEIVAQFKHTVLLMPNGVNLVTGIPFEAENYVSEYSVAQEE 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,558,830
Number of Sequences: 53049
Number of extensions: 683925
Number of successful extensions: 1335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)