Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18b22r
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 400 e-112
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 400 e-112
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 400 e-112
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 400 e-112
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 400 e-112
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 400 e-112
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 400 e-112
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 400 e-112
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 400 e-112
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 394 e-110
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 378 e-105
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 194 8e-50
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 188 3e-48
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 121 7e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 114 8e-26
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 9e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 78 9e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 32 0.43
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 32 0.57
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 32 0.57
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.99
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.99
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.99
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 31 0.99
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.99
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 30 1.7
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 7.0
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 7.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 7.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 400 bits (986), Expect = e-112
Identities = 189/194 (97%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 400 bits (986), Expect = e-112
Identities = 189/194 (97%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 400 bits (986), Expect = e-112
Identities = 189/194 (97%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 400 bits (986), Expect = e-112
Identities = 189/194 (97%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 139 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 198
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 199 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 258
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 259 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 318
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 319 YDESGPSIVHRKCF 332
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 123 YEGYALPHAILRLDLA 138
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 400 bits (986), Expect = e-112
Identities = 189/194 (97%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 169 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 228
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 229 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 288
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 289 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 348
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 349 YDESGPSIVHRKCF 362
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 153 YEGYALPHAILRLDLA 168
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 400 bits (986), Expect = e-112
Identities = 189/194 (97%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 400 bits (984), Expect = e-112
Identities = 188/194 (96%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 400 bits (984), Expect = e-112
Identities = 188/194 (96%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 400 bits (984), Expect = e-112
Identities = 188/194 (96%), Positives = 193/194 (99%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 394 bits (969), Expect = e-110
Identities = 187/194 (96%), Positives = 192/194 (98%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAILRLDLA
Sbjct: 167 YEGYALPHAILRLDLA 182
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 378 bits (931), Expect = e-105
Identities = 178/194 (91%), Positives = 185/194 (95%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYE
Sbjct: 182 GRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYE 241
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSG
Sbjct: 242 LPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSG 301
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 302 GTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 230 YDESGPSIVHRKCF 189
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1
Query: 819 YEGYALPHAILRLDLA 772
YEGYALPHAI RLDLA
Sbjct: 166 YEGYALPHAIQRLDLA 181
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 194 bits (472), Expect = 8e-50
Identities = 93/194 (47%), Positives = 127/194 (65%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRD+T+YL +L GY F + E EIVR++KE CY+ALD T ++S++ SY
Sbjct: 186 GRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYA 240
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSG
Sbjct: 241 LPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSG 300
Query: 410 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 230 YDESGPSIVHRKCF 189
Y++ G S +H++ F
Sbjct: 361 YEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 188 bits (459), Expect = 3e-48
Identities = 93/198 (46%), Positives = 127/198 (64%), Gaps = 13/198 (6%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 591
GRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A ++ L + Y
Sbjct: 186 GRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYT 245
Query: 590 LPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 411
LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSG
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSG 305
Query: 410 GTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL- 267
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 266 -STFQQMWISKQEYDESG 216
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 121 bits (291), Expect = 7e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -2
Query: 596 YELPDGQVITIGNERFRCPEALFQPSFLGMEANG-----IHETTYNSIMKCDVDIRKDLY 432
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 431 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 261
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 260 FQQMWISKQEYDESGPSIVHRKC 192
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 114 bits (274), Expect = 8e-26
Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 25/220 (11%)
Frame = -2
Query: 791 SCVWTWP--GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA-A 621
SC+ P GRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 195 SCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDT 254
Query: 620 SSSSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-ANGIHETTYNSIMKC 459
++ ++Y+ + + +G ERF PE F P F E I +T I +C
Sbjct: 255 DAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQC 314
Query: 458 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKI 327
+D+R+ LY N VLSGG+TM+ A ++Q+++ L+ P + +++
Sbjct: 315 PIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQV 374
Query: 326 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 207
I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 375 ISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 112 bits (269), Expect = 3e-25
Identities = 55/167 (32%), Positives = 98/167 (58%), Gaps = 3/167 (1%)
Frame = -2
Query: 722 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNER 552
Y+F + E+ I+R E+ YV D+++E + + SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 551 FRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 372
F C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA++++
Sbjct: 433 FLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLE 492
Query: 371 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 231
+E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 493 QELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 77.8 bits (183), Expect = 9e-15
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEK 600
G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A + ++ K
Sbjct: 177 GKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMK 234
Query: 599 SYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMEANGIHETTY 477
Y +PD G V I +G ERF PE LF PS + ++ G+ E
Sbjct: 235 RYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVI 294
Query: 476 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERK 306
SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 295 ESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT- 353
Query: 305 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 207
W G L L+ + WI+++++DE G S+
Sbjct: 354 -HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 77.8 bits (183), Expect = 9e-15
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Frame = -2
Query: 770 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEK 600
G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A + ++ K
Sbjct: 177 GKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMK 234
Query: 599 SYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMEANGIHETTY 477
Y +PD G V I +G ERF PE LF PS + ++ G+ E
Sbjct: 235 RYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVI 294
Query: 476 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERK 306
SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 295 ESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT- 353
Query: 305 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 207
W G L L+ + WI+++++DE G S+
Sbjct: 354 -HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 470 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 306
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 305 ----YSVWIGGSILASL-STFQQMWISKQEY 228
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -3
Query: 682 TSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETK---DSVAQRLSSNPRSW 512
T+ S T+ STS+ + P P P+ T+ PT+ PS + + LS+ P
Sbjct: 241 TAVASVTTTASTSTTKTSPTKPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQP--- 297
Query: 511 VWKPTASTRPHTTP 470
P + +PH P
Sbjct: 298 ---PRRTPQPHPKP 308
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -3
Query: 691 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 512
S VTS +T++ T++ A S S + T ++PS + + S+N S
Sbjct: 261 SIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 320
Query: 511 VWKPTASTRPHTTPS*SAT 455
PT S P P+ +AT
Sbjct: 321 TTSPTTSPTPEPEPTTTAT 339
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -3
Query: 691 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 512
S VTS +T++ T++ A S S + T ++PS + + S+N S
Sbjct: 243 SIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 302
Query: 511 VWKPTASTRPHTTPS*SAT 455
PT S P P+ +AT
Sbjct: 303 TTSPTTSPTPEPEPTTTAT 321
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.1 bits (67), Expect = 0.99
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 294 PYGVLPLWGSNDLNLHCRWGESCD 365
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.99
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 294 PYGVLPLWGSNDLNLHCRWGESCD 365
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.1 bits (67), Expect = 0.99
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 294 PYGVLPLWGSNDLNLHCRWGESCD 365
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 682 TSRRSCATSLSTSSRRWPPLHPAAPS 605
+SRRS S+STS++ WP +APS
Sbjct: 80 SSRRSSLASVSTSTKNWPSKSSSAPS 105
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.99
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = -3
Query: 670 SCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTAS 491
S S ST + P AP+ S TN PT +SP + V+ SS P +
Sbjct: 238 SSTASTSTPAPTNLPTTTGAPTNSTTNPPTA-TSPKTSSQPVSSSTSSTSSPAPTNPPTT 296
Query: 490 TRPHTTPS*SAT 455
+RP T +A+
Sbjct: 297 SRPTTASQSTAS 308
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +3
Query: 441 LTDVHVALHDGVVCGLVDAVGFHTQERGLEESLWATESFVSDGDDLTVGKFVRLLEGAAG 620
+T +H A V+ G +DA + R E + + D+LTV + +RL+ G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553
Query: 621 CSGG-HLLLEVESDVAQL-LLDVTNDFP--LGGGSER 719
SGG ++ ES + Q+ L D N L GG +R
Sbjct: 554 RSGGSDFKMDAESLLKQIELTDKRNTLAKNLSGGMKR 590
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 640 RRWPPLHPAAPSRSLTNFPTVRSSPSE 560
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -3
Query: 646 SSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTA 494
S ++WPP+ +P R N T P E + ++ P V+KP A
Sbjct: 406 SPKKWPPVGTTSPPREPVNRLT---EPDEPSTYTPKPIAYEPEPMVYKPEA 453
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 601 SLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTASTRPHTTPS*SATW 452
S T+ T + SET + + +S P +W ++ P T P ++TW
Sbjct: 2501 SETSTSTSSQTVSETDGTTSMFQTSEPSTWQTSNEPTSEPTTVPLETSTW 2550
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 649 TSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTASTRPHTTP 470
T S P P++P S T+ PT SPSE + AQ +P S + P++ T +P
Sbjct: 1784 TYSPTSPSYTPSSPQYSPTS-PTYTPSPSEQPGTSAQ---YSPTSPTYSPSSPTYSPASP 1839
Query: 469 S 467
S
Sbjct: 1840 S 1840
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 649 TSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTASTRPHTTP 470
T S P P++P S T+ PT SPSE + AQ +P S + P++ T +P
Sbjct: 1791 TYSPTSPSYTPSSPQYSPTS-PTYTPSPSEQPGTSAQ---YSPTSPTYSPSSPTYSPASP 1846
Query: 469 S 467
S
Sbjct: 1847 S 1847
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -3
Query: 682 TSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWK 503
T+ + T+ T++ P AP+ + T PT ++ T +V ++ P +
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTT-PTTTTTTPTTTTTVPTTTTTTPTTTTTT 230
Query: 502 PTASTRPHTTPS*SAT 455
T T TTP+ + T
Sbjct: 231 TTTPTTTTTTPTTTTT 246
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -3
Query: 691 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPS 563
S +TS+R + S+SS P + +P RS++ TVRS+PS
Sbjct: 761 SLITSKRVQRQN-SSSSLTSNPRNSISPRRSISPTTTVRSAPS 802
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,103,852
Number of Sequences: 27780
Number of extensions: 424390
Number of successful extensions: 1458
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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