Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18b18r
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus o...    30   9.5  
Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus o...    30   9.5  
M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.                   30   9.5  
AL132671-5|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus...    30   9.5  
AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus...    30   9.5  

>Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2341

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 830 QFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSY 660
           Q+ Y QL+G+  Y   ++RP  SY V  L  F      V W    ++  Y   + SY
Sbjct: 141 QWKYAQLLGSWTYTKTVSRP--SYVVKPLHPFTEYIFRVVWIFTAQLQLYSPPSPSY 195


>Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 830 QFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSY 660
           Q+ Y QL+G+  Y   ++RP  SY V  L  F      V W    ++  Y   + SY
Sbjct: 132 QWKYAQLLGSWTYTKTVSRP--SYVVKPLHPFTEYIFRVVWIFTAQLQLYSPPSPSY 186


>M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 830 QFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSY 660
           Q+ Y QL+G+  Y   ++RP  SY V  L  F      V W    ++  Y   + SY
Sbjct: 132 QWKYAQLLGSWTYTKTVSRP--SYVVKPLHPFTEYIFRVVWIFTAQLQLYSPPSPSY 186


>AL132671-5|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2341

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 830 QFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSY 660
           Q+ Y QL+G+  Y   ++RP  SY V  L  F      V W    ++  Y   + SY
Sbjct: 141 QWKYAQLLGSWTYTKTVSRP--SYVVKPLHPFTEYIFRVVWIFTAQLQLYSPPSPSY 195


>AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 830 QFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSY 660
           Q+ Y QL+G+  Y   ++RP  SY V  L  F      V W    ++  Y   + SY
Sbjct: 132 QWKYAQLLGSWTYTKTVSRP--SYVVKPLHPFTEYIFRVVWIFTAQLQLYSPPSPSY 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,944,767
Number of Sequences: 237096
Number of extensions: 1600891
Number of successful extensions: 2628
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2628
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)