Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18b18r
(863 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p pro... 208 1e-53
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 183 3e-46
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 183 3e-46
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 183 3e-46
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 183 3e-46
AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein ... 171 8e-43
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 164 1e-40
X02600-2|CAA26446.1| 146|Drosophila melanogaster protein ( Dros... 118 1e-26
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros... 72 9e-13
BT011018-1|AAR30178.1| 520|Drosophila melanogaster RE58902p pro... 30 3.6
AE014134-1300|AAF52532.1| 787|Drosophila melanogaster CG6739-PA... 30 3.6
AY070946-1|AAL48568.1| 308|Drosophila melanogaster RE04130p pro... 29 8.3
AE014298-1707|AAF48108.2| 308|Drosophila melanogaster CG15739-P... 29 8.3
>AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p protein.
Length = 714
Score = 208 bits (507), Expect = 1e-53
Identities = 108/209 (51%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Frame = -1
Query: 821 YHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYGLKFTK 642
Y IG LM+L + TRPDI +SV+ L+Q N S H K IL+YL T L + K
Sbjct: 497 YQSTIGELMWLGLTTRPDILHSVAKLAQRNKDPHSEHMVAVKHILRYLASTVDVKLHYQK 556
Query: 641 DTCNLEGFVDADWASNSIDRKSYTGFCFKLSGCVVSYECRKQQTVALSSTEAEYMAIAEA 462
GFVDADW + +DRKSYTG+ F LSG VS+ KQQ+VALSSTEAEYMA+ A
Sbjct: 557 CGQAFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYMALTTA 616
Query: 461 CKEAIYLKSILSDI--VDCNYTVVIYNDNQGAQKLTENPLFHKRTKHIDVRYHFIREAVS 288
CKEAI L+ ++ +I D V++ DN AQ L +NP+ H RTKHID+RYHFIRE +
Sbjct: 617 CKEAIALRRLIVEIGCGDLKTPTVMHGDNLSAQHLAKNPVHHSRTKHIDIRYHFIREVMK 676
Query: 287 NKLVKIDYLSTSEMPADILTKSLSGAKHN 201
V ++Y ST+EM ADI+TK+LS KHN
Sbjct: 677 EGHVVLEYTSTNEMIADIMTKNLSKGKHN 705
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 183 bits (445), Expect = 3e-46
Identities = 92/215 (42%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Frame = -1
Query: 836 DNQFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYG 657
D P LIG LMY+ + TRPD++ +V+ LS++++ S W + KR+L+YL+ T
Sbjct: 784 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 843
Query: 656 LKFTKDTC---NLEGFVDADWASNSIDRKSYTGFCFKLSGC-VVSYECRKQQTVALSSTE 489
L F K+ + G+VD+DWA + IDRKS TG+ FK+ ++ + ++Q +VA SSTE
Sbjct: 844 LIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 903
Query: 488 AEYMAIAEACKEAIYLKSILSDI-VDCNYTVVIYNDNQGAQKLTENPLFHKRTKHIDVRY 312
AEYMA+ EA +EA++LK +L+ I + + IY DNQG + NP HKR KHID++Y
Sbjct: 904 AEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKY 963
Query: 311 HFIREAVSNKLVKIDYLSTSEMPADILTKSLSGAK 207
HF RE V N ++ ++Y+ T ADI TK L A+
Sbjct: 964 HFAREQVQNNVICLEYIPTENQLADIFTKPLPAAR 998
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 183 bits (445), Expect = 3e-46
Identities = 92/215 (42%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Frame = -1
Query: 836 DNQFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYG 657
D P LIG LMY+ + TRPD++ +V+ LS++++ S W + KR+L+YL+ T
Sbjct: 1176 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 1235
Query: 656 LKFTKDTC---NLEGFVDADWASNSIDRKSYTGFCFKLSGC-VVSYECRKQQTVALSSTE 489
L F K+ + G+VD+DWA + IDRKS TG+ FK+ ++ + ++Q +VA SSTE
Sbjct: 1236 LIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 1295
Query: 488 AEYMAIAEACKEAIYLKSILSDI-VDCNYTVVIYNDNQGAQKLTENPLFHKRTKHIDVRY 312
AEYMA+ EA +EA++LK +L+ I + + IY DNQG + NP HKR KHID++Y
Sbjct: 1296 AEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKY 1355
Query: 311 HFIREAVSNKLVKIDYLSTSEMPADILTKSLSGAK 207
HF RE V N ++ ++Y+ T ADI TK L A+
Sbjct: 1356 HFAREQVQNNVICLEYIPTENQLADIFTKPLPAAR 1390
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 183 bits (445), Expect = 3e-46
Identities = 92/215 (42%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Frame = -1
Query: 836 DNQFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYG 657
D P LIG LMY+ + TRPD++ +V+ LS++++ S W + KR+L+YL+ T
Sbjct: 1176 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 1235
Query: 656 LKFTKDTC---NLEGFVDADWASNSIDRKSYTGFCFKLSGC-VVSYECRKQQTVALSSTE 489
L F K+ + G+VD+DWA + IDRKS TG+ FK+ ++ + ++Q +VA SSTE
Sbjct: 1236 LIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 1295
Query: 488 AEYMAIAEACKEAIYLKSILSDI-VDCNYTVVIYNDNQGAQKLTENPLFHKRTKHIDVRY 312
AEYMA+ EA +EA++LK +L+ I + + IY DNQG + NP HKR KHID++Y
Sbjct: 1296 AEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKY 1355
Query: 311 HFIREAVSNKLVKIDYLSTSEMPADILTKSLSGAK 207
HF RE V N ++ ++Y+ T ADI TK L A+
Sbjct: 1356 HFAREQVQNNVICLEYIPTENQLADIFTKPLPAAR 1390
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p protein.
Length = 1409
Score = 183 bits (445), Expect = 3e-46
Identities = 92/215 (42%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Frame = -1
Query: 836 DNQFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYG 657
D P LIG LMY+ + TRPD++ +V+ LS++++ S W + KR+L+YL+ T
Sbjct: 1176 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 1235
Query: 656 LKFTKDTC---NLEGFVDADWASNSIDRKSYTGFCFKLSGC-VVSYECRKQQTVALSSTE 489
L F K+ + G+VD+DWA + IDRKS TG+ FK+ ++ + ++Q +VA SSTE
Sbjct: 1236 LIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 1295
Query: 488 AEYMAIAEACKEAIYLKSILSDI-VDCNYTVVIYNDNQGAQKLTENPLFHKRTKHIDVRY 312
AEYMA+ EA +EA++LK +L+ I + + IY DNQG + NP HKR KHID++Y
Sbjct: 1296 AEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKY 1355
Query: 311 HFIREAVSNKLVKIDYLSTSEMPADILTKSLSGAK 207
HF RE V N ++ ++Y+ T ADI TK L A+
Sbjct: 1356 HFAREQVQNNVICLEYIPTENQLADIFTKPLPAAR 1390
>AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein
protein.
Length = 415
Score = 171 bits (417), Expect = 8e-43
Identities = 87/201 (43%), Positives = 132/201 (65%), Gaps = 1/201 (0%)
Frame = -1
Query: 821 YHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYGLKFTK 642
+ LIG+LMYL+V++RPDI +SVS LSQ N AK +L+YL T + + + K
Sbjct: 200 FQSLIGSLMYLAVVSRPDILHSVSKLSQRNTDPHHEDEAAAKHVLRYLCGTINLSIIYMK 259
Query: 641 DTCNLEGFVDADWASNSIDRKSYTGFCFKLSGCVVSYECRKQQTVALSSTEAEYMAIAEA 462
++ F DADWA++ +DRKSY+G+ F ++G S+ KQ +A SSTEAEY+A++ A
Sbjct: 260 TGELVKEFADADWANDKVDRKSYSGYAFLMAGSAFSWGSSKQSVIAQSSTEAEYIALSTA 319
Query: 461 CKEAIYLKSILSDIVDCNY-TVVIYNDNQGAQKLTENPLFHKRTKHIDVRYHFIREAVSN 285
KEA++L+ +L ++ + + + DN A + +NP+ HKRTKHIDVRYHFIR+ V+
Sbjct: 320 AKEAVFLRRLLQEMGWFDKGPLKLLCDNLSASSIAKNPINHKRTKHIDVRYHFIRDKVNK 379
Query: 284 KLVKIDYLSTSEMPADILTKS 222
+ ++Y++T ADILTK+
Sbjct: 380 NEIIVEYVNTQNNVADILTKA 400
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 164 bits (399), Expect = 1e-40
Identities = 87/174 (50%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Frame = -1
Query: 821 YHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYGLKFTK 642
Y IG LM+L + TRPD+ +SV+ L+Q N S H K IL+YL T L + K
Sbjct: 809 YQSTIGELMWLGLTTRPDMLHSVAKLAQRNQDPHSEHMVAVKHILRYLASTVDVKLHYQK 868
Query: 641 DTCNLEGFVDADWASNSIDRKSYTGFCFKLSGCVVSYECRKQQTVALSSTEAEYMAIAEA 462
GFVDADW + +DRKSYTG+ F LSG VS+ KQQ+VALSSTEAEYMA+ A
Sbjct: 869 CGQAFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYMALTTA 928
Query: 461 CKEAIYLKSILSDIV--DCNYTVVIYNDN-QGAQKLTENPLFHKRTKHIDVRYH 309
CKEAI L+ ++ +IV D V++ DN + A +L +NP+ H RTKHID+RYH
Sbjct: 929 CKEAIALRRLIVEIVCGDLKTPTVMHGDNLKCAAQLAKNPVHHSRTKHIDIRYH 982
>X02600-2|CAA26446.1| 146|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 146
Score = 118 bits (284), Expect = 1e-26
Identities = 57/127 (44%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
Frame = -1
Query: 581 KSYTGFCFKLSGC-VVSYECRKQQTVALSSTEAEYMAIAEACKEAIYLKSILSDI-VDCN 408
KS TG+ FK+ ++ + ++Q +VA SSTEAEYMA+ EA +EA++LK +L+ I +
Sbjct: 1 KSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLE 60
Query: 407 YTVVIYNDNQGAQKLTENPLFHKRTKHIDVRYHFIREAVSNKLVKIDYLSTSEMPADILT 228
+ IY DNQG + NP HKR KHID++YHF RE V N ++ ++Y+ T ADI T
Sbjct: 61 NPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFT 120
Query: 227 KSLSGAK 207
K L A+
Sbjct: 121 KPLPAAR 127
>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 1288
Score = 72.1 bits (169), Expect = 9e-13
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = -1
Query: 836 DNQFPYHQLIGNLMYLSVLTRPDISYSVSYLSQFNNCFTSVHWHHAKRILKYLQKTKSYG 657
D P LIG LMY+ + TRPD++ +V+ LS++++ S W + KR+L+YL+ T
Sbjct: 1176 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 1235
Query: 656 LKFTKDTC---NLEGFVDADWASNSIDRKSYTGFCFK 555
L F K+ + G+VD+DWA + IDRK G K
Sbjct: 1236 LIFKKNLAFENKIIGYVDSDWAGSEIDRKVQQGIYSK 1272
>BT011018-1|AAR30178.1| 520|Drosophila melanogaster RE58902p
protein.
Length = 520
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 530 ECRKQQTVALSSTEAEYMAIAEACKEAIYLKSILSDIVDCN 408
ECR L AI EAC IY +L ++ DCN
Sbjct: 371 ECRPLHIGQLPPCRRICKAILEACSIPIYNSDVLGELFDCN 411
>AE014134-1300|AAF52532.1| 787|Drosophila melanogaster CG6739-PA
protein.
Length = 787
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 530 ECRKQQTVALSSTEAEYMAIAEACKEAIYLKSILSDIVDCN 408
ECR L AI EAC IY +L ++ DCN
Sbjct: 371 ECRPLHIGQLPPCRRICKAILEACSIPIYNSDVLGELFDCN 411
>AY070946-1|AAL48568.1| 308|Drosophila melanogaster RE04130p
protein.
Length = 308
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -1
Query: 794 YLSVLTRPDISYSVSYLSQFNNCFTSVH----WHHAKRILKYLQKTKSYGL 654
+L+ LT + S + F VH WH AK I+ YLQ K GL
Sbjct: 56 HLTFLTNNSVRTSEQCVKLFAKIGMQVHPEQIWHPAKSIVSYLQSIKFEGL 106
>AE014298-1707|AAF48108.2| 308|Drosophila melanogaster CG15739-PA
protein.
Length = 308
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -1
Query: 794 YLSVLTRPDISYSVSYLSQFNNCFTSVH----WHHAKRILKYLQKTKSYGL 654
+L+ LT + S + F VH WH AK I+ YLQ K GL
Sbjct: 56 HLTFLTNNSVRTSEQCVKLFAKIGMQVHPEQIWHPAKSIVSYLQSIKFEGL 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,452,428
Number of Sequences: 53049
Number of extensions: 517924
Number of successful extensions: 1261
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -