Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18b18f
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase prot...    27   0.82 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    26   1.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.4  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   4.4  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   7.6  

>Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 269 LGINGHDEFCFRFSVFGMTQINRNGVDVYAFQDKKVSCCE 150
           + + GH++ C  F + G+ +IN+N    +   DK  +  E
Sbjct: 12  ISVIGHEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSE 51


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 379 SVRSRLIFLVNPLSSNNFCSFCHKSLTLVSFLMC 278
           +V+   IF + P S +  C  CHK+L L   L C
Sbjct: 321 AVKFTHIFQILPPSYDRLCQQCHKALHLDIGLRC 354


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 675 NFNKKFEKPTSNYTQNVKKIIKCYK 749
           NFN   +KP SN+   V+ ++  ++
Sbjct: 639 NFNSSVDKPRSNFDSFVQSLLTVFQ 663


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 562 IPECSIAIIIGANFSGSPANSNDPIHSSLIS 470
           IP C   +I+ +N++   ++  DP    L S
Sbjct: 254 IPHCGARLILNSNYTRKSSSKKDPTSGVLPS 284


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 477 NEEWIGSLLLAGLPEKFAPMIMAIEH 554
           N  WIG L+  G    F P  + +EH
Sbjct: 126 NNWWIGRLVKEGCEVGFIPSPVKLEH 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,936
Number of Sequences: 2352
Number of extensions: 14269
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)