Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18b18f
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07656-1|CAA30502.1| 273|Drosophila melanogaster protein ( Dros... 44 2e-04
AE014297-2476|AAF55520.1| 89|Drosophila melanogaster CG18598-P... 36 0.059
BT011524-1|AAS15660.1| 89|Drosophila melanogaster RH42419p pro... 34 0.18
BT029721-1|ABL75778.1| 88|Drosophila melanogaster IP17567p pro... 30 3.9
BT029660-1|ABL75718.1| 52|Drosophila melanogaster IP17267p pro... 30 3.9
AY119144-1|AAM51004.1| 511|Drosophila melanogaster RE48727p pro... 29 5.1
AY094886-1|AAM11239.1| 562|Drosophila melanogaster RE53130p pro... 29 5.1
AF522076-1|AAM90976.1| 562|Drosophila melanogaster LOBE protein. 29 5.1
AE014297-3209|AAF56041.3| 872|Drosophila melanogaster CG4917-PB... 29 5.1
AE014297-3208|AAN13917.2| 853|Drosophila melanogaster CG4917-PA... 29 5.1
AE013599-1899|AAF58241.1| 562|Drosophila melanogaster CG10109-P... 29 5.1
X99511-1|CAA67861.1| 294|Drosophila melanogaster CDK5 kinase pr... 29 8.9
U21552-1|AAA63754.1| 294|Drosophila melanogaster CDK5 homolog p... 29 8.9
AY061049-1|AAL28597.1| 294|Drosophila melanogaster LD01910p pro... 29 8.9
AE013599-2083|AAF58119.1| 294|Drosophila melanogaster CG8203-PA... 29 8.9
>X07656-1|CAA30502.1| 273|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 273
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/139 (20%), Positives = 58/139 (41%)
Frame = +3
Query: 219 AEDRKAKAKLVMTIDPKLYVHIKNETKVKDLWQKLQKLFDDSGFTRKXXXXXXXXXXXXD 398
++D KA A +++++ ++K + W+ LQ + G R
Sbjct: 52 SQDEKALATIILSVKSSQLGYVKGCLTAAEAWKVLQDVHQPKGPLRTVMLYKKLLSKRLL 111
Query: 399 NCESMTSYVSQIVETAQRLKGTGFEINEEWIGSLLLAGLPEKFAPMIMAIEHSGIAINSD 578
+S++S++ + E L I E+ +LL+ LPE F ++AIE D
Sbjct: 112 EGQSISSHIKEFKEIFDALDAVEIGITEKLRSVVLLSSLPESFENFVVAIETRDDVPLFD 171
Query: 579 VIKTKLLDMSSEVGDHDSE 635
+ KL++ + G + +
Sbjct: 172 ALCIKLIEEDTRRGGAEQQ 190
>AE014297-2476|AAF55520.1| 89|Drosophila melanogaster CG18598-PA
protein.
Length = 89
Score = 35.9 bits (79), Expect = 0.059
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +3
Query: 102 LNVPKLKGRENYDDWAFAARNFLILEGI--DIDAIPV--DLSHAEDRKAKAKLVMTIDPK 269
L + KLKG +NY W+ R +L E + ++ P + S +D++AK ++ I+ K
Sbjct: 5 LQIEKLKGLDNYKAWSMTVRAYLESEELWTVVENGPENNEESLLKDKRAKFLILCLIETK 64
Query: 270 LYVHIKNETKVKDLWQKLQ 326
L + + +DLW L+
Sbjct: 65 LCQFMVSIRTARDLWNYLR 83
>BT011524-1|AAS15660.1| 89|Drosophila melanogaster RH42419p
protein.
Length = 89
Score = 34.3 bits (75), Expect = 0.18
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 102 LNVPKLKGRENYDDWAFAARNFLILEGI--DIDAIPV--DLSHAEDRKAKAKLVMTIDPK 269
L + KLKG +NY W+ R +L E + ++ P + S +D++AK ++ + K
Sbjct: 5 LQIEKLKGLDNYKAWSMTVRAYLESEELWTVVENGPENNEESLLKDKRAKFLILCLFETK 64
Query: 270 LYVHIKNETKVKDLWQKLQ 326
L + + +DLW L+
Sbjct: 65 LCQFMVSIRTARDLWNYLR 83
>BT029721-1|ABL75778.1| 88|Drosophila melanogaster IP17567p
protein.
Length = 88
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 105 NVPKLKGRENYDDWAFAARNFL 170
++PKL GRENY W + FL
Sbjct: 13 SIPKLHGRENYWQWRILLKTFL 34
>BT029660-1|ABL75718.1| 52|Drosophila melanogaster IP17267p
protein.
Length = 52
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 105 NVPKLKGRENYDDWAFAARNFL 170
++PKL GRENY W + FL
Sbjct: 12 SIPKLHGRENYWQWRILLKTFL 33
>AY119144-1|AAM51004.1| 511|Drosophila melanogaster RE48727p
protein.
Length = 511
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 688 FLLKFCSTLCFCFDHNAISESWSPTSEL--ISSNLVFMT 578
+L FC+ +C + ++++W P SEL IS L F+T
Sbjct: 4 YLYFFCAFICNLIVYPLVTDAWLPHSELTIISGALTFIT 42
>AY094886-1|AAM11239.1| 562|Drosophila melanogaster RE53130p
protein.
Length = 562
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 702 LVFQIFY*NFVLPFVFVSTIMQFLSHGHLP 613
L+ Q+F + L FVF S IM+F H + P
Sbjct: 45 LLSQVFQQKYPLDFVFYSHIMEFFKHAYGP 74
>AF522076-1|AAM90976.1| 562|Drosophila melanogaster LOBE protein.
Length = 562
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 702 LVFQIFY*NFVLPFVFVSTIMQFLSHGHLP 613
L+ Q+F + L FVF S IM+F H + P
Sbjct: 45 LLSQVFQQKYPLDFVFYSHIMEFFKHAYGP 74
>AE014297-3209|AAF56041.3| 872|Drosophila melanogaster CG4917-PB,
isoform B protein.
Length = 872
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 688 FLLKFCSTLCFCFDHNAISESWSPTSEL--ISSNLVFMT 578
+L FC+ +C + ++++W P SEL IS L F+T
Sbjct: 365 YLYFFCAFICNLIVYPLVTDAWLPHSELTIISGALTFIT 403
>AE014297-3208|AAN13917.2| 853|Drosophila melanogaster CG4917-PA,
isoform A protein.
Length = 853
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 688 FLLKFCSTLCFCFDHNAISESWSPTSEL--ISSNLVFMT 578
+L FC+ +C + ++++W P SEL IS L F+T
Sbjct: 346 YLYFFCAFICNLIVYPLVTDAWLPHSELTIISGALTFIT 384
>AE013599-1899|AAF58241.1| 562|Drosophila melanogaster CG10109-PA
protein.
Length = 562
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 702 LVFQIFY*NFVLPFVFVSTIMQFLSHGHLP 613
L+ Q+F + L FVF S IM+F H + P
Sbjct: 45 LLSQVFQQKYPLDFVFYSHIMEFFKHAYGP 74
>X99511-1|CAA67861.1| 294|Drosophila melanogaster CDK5 kinase
protein.
Length = 294
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 691 NFLLKFCSTLCFCFDHNAISESWSPTSELISSNLVFMTSEF 569
+F+L+ L FC HN + P + LI+ N ++F
Sbjct: 105 SFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADF 145
>U21552-1|AAA63754.1| 294|Drosophila melanogaster CDK5 homolog
protein.
Length = 294
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 691 NFLLKFCSTLCFCFDHNAISESWSPTSELISSNLVFMTSEF 569
+F+L+ L FC HN + P + LI+ N ++F
Sbjct: 105 SFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADF 145
>AY061049-1|AAL28597.1| 294|Drosophila melanogaster LD01910p
protein.
Length = 294
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 691 NFLLKFCSTLCFCFDHNAISESWSPTSELISSNLVFMTSEF 569
+F+L+ L FC HN + P + LI+ N ++F
Sbjct: 105 SFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADF 145
>AE013599-2083|AAF58119.1| 294|Drosophila melanogaster CG8203-PA
protein.
Length = 294
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 691 NFLLKFCSTLCFCFDHNAISESWSPTSELISSNLVFMTSEF 569
+F+L+ L FC HN + P + LI+ N ++F
Sbjct: 105 SFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADF 145
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,075,205
Number of Sequences: 53049
Number of extensions: 690621
Number of successful extensions: 1606
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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